RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 SH3TC2Q8TF17 1288 aa23.25■■□□□ 1.31
GTF3C1-207ENST00000567806 FRAT1Q92837 279 aaPredicted RBP23.25■■□□□ 1.31
GTF3C1-207ENST00000567806 ZHX2Q9Y6X8 837 aa23.25■■□□□ 1.31
GTF3C1-207ENST00000567806 KIAA0100Q14667 2235 aaKnown RBP23.24■■□□□ 1.31
GTF3C1-207ENST00000567806 G3BP1Q13283 466 aaKnown RBP eCLIP23.24■■□□□ 1.31
GTF3C1-207ENST00000567806 PICALMQ13492 652 aa23.24■■□□□ 1.31
GTF3C1-207ENST00000567806 FASTKD5Q7L8L6 764 aaKnown RBP23.24■■□□□ 1.31
GTF3C1-207ENST00000567806 PARK7Q99497 189 aaKnown RBP23.24■■□□□ 1.31
GTF3C1-207ENST00000567806 LDHCP07864 332 aa23.23■■□□□ 1.31
GTF3C1-207ENST00000567806 MOGSQ13724 837 aa23.23■■□□□ 1.31
GTF3C1-207ENST00000567806 ATF7IPQ6VMQ6 1270 aa23.23■■□□□ 1.31
GTF3C1-207ENST00000567806 SH3BP5LQ7L8J4 393 aa23.23■■□□□ 1.31
GTF3C1-207ENST00000567806 SRRDQ9UH36 339 aa23.23■■□□□ 1.31
GTF3C1-207ENST00000567806 MROH7-TTC4A0A0A0MT08 1334 aa23.23■■□□□ 1.31
GTF3C1-207ENST00000567806 CENPFP49454 3210 aa23.22■■□□□ 1.31
GTF3C1-207ENST00000567806 DDTLA6NHG4 134 aaPredicted RBP23.22■■□□□ 1.31
GTF3C1-207ENST00000567806 TRIM27P14373 513 aa23.22■■□□□ 1.31
GTF3C1-207ENST00000567806 PTPRAP18433 802 aa23.22■■□□□ 1.31
GTF3C1-207ENST00000567806 GSTO1P78417 241 aa23.22■■□□□ 1.31
GTF3C1-207ENST00000567806 MAP3K10Q02779 954 aa23.22■■□□□ 1.31
GTF3C1-207ENST00000567806 MECOMQ03112 1051 aa23.22■■□□□ 1.31
GTF3C1-207ENST00000567806 TRIM47Q96LD4 638 aa23.22■■□□□ 1.31
GTF3C1-207ENST00000567806 GPR75-ASB3A0A0A6YYF3 556 aa23.21■■□□□ 1.31
GTF3C1-207ENST00000567806 CTNND1O60716 968 aaKnown RBP23.21■■□□□ 1.31
GTF3C1-207ENST00000567806 BCAR3O75815 825 aa23.21■■□□□ 1.31
GTF3C1-207ENST00000567806 GPAT2Q6NUI2 795 aa23.21■■□□□ 1.31
GTF3C1-207ENST00000567806 SPATA5Q8NB90 893 aa23.21■■□□□ 1.31
GTF3C1-207ENST00000567806 RAET1EQ8TD07 263 aa23.21■■□□□ 1.31
GTF3C1-207ENST00000567806 CLUAP1Q96AJ1 413 aa23.21■■□□□ 1.31
GTF3C1-207ENST00000567806 DDX4Q9NQI0 724 aaKnown RBP23.21■■□□□ 1.31
GTF3C1-207ENST00000567806 HMG20BQ9P0W2 317 aa23.21■■□□□ 1.31
GTF3C1-207ENST00000567806 AFG3L2Q9Y4W6 797 aa23.21■■□□□ 1.31
GTF3C1-207ENST00000567806 ATRNL1Q5VV63 1379 aa23.2■■□□□ 1.3
GTF3C1-207ENST00000567806 OSBPP22059 807 aa23.2■■□□□ 1.3
GTF3C1-207ENST00000567806 CTGFP29279 349 aa23.2■■□□□ 1.3
GTF3C1-207ENST00000567806 GADL1Q6ZQY3 521 aa23.2■■□□□ 1.3
GTF3C1-207ENST00000567806 RAI14Q9P0K7 980 aa23.2■■□□□ 1.3
GTF3C1-207ENST00000567806 MYH2Q9UKX2 1941 aa23.2■■□□□ 1.3
GTF3C1-207ENST00000567806 ADGRA2Q96PE1 1338 aa23.19■■□□□ 1.3
GTF3C1-207ENST00000567806 A0A0G2JLL6 359 aaPredicted RBP23.19■■□□□ 1.3
GTF3C1-207ENST00000567806 MAP4K4O95819 1239 aaPredicted RBP23.19■■□□□ 1.3
GTF3C1-207ENST00000567806 CYP2C8P10632 490 aa23.19■■□□□ 1.3
GTF3C1-207ENST00000567806 TBC1D9Q6ZT07 1266 aa23.19■■□□□ 1.3
GTF3C1-207ENST00000567806 PRRT2Q7Z6L0 340 aaPredicted RBP23.19■■□□□ 1.3
GTF3C1-207ENST00000567806 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.19■■□□□ 1.3
GTF3C1-207ENST00000567806 PNMA6EA0A0J9YXQ4 647 aa23.18■■□□□ 1.3
GTF3C1-207ENST00000567806 NPM3O75607 178 aaKnown RBP23.18■■□□□ 1.3
GTF3C1-207ENST00000567806 UQCRFS1P1P0C7P4 283 aa23.18■■□□□ 1.3
GTF3C1-207ENST00000567806 FCGRTP55899 365 aa23.18■■□□□ 1.3
GTF3C1-207ENST00000567806 RHBDL3P58872 404 aa23.18■■□□□ 1.3
GTF3C1-207ENST00000567806 TNNQ9UQP3 1299 aa23.18■■□□□ 1.3
GTF3C1-207ENST00000567806 RBBP6Q7Z6E9 1792 aaKnown RBP23.18■■□□□ 1.3
GTF3C1-207ENST00000567806 RFX7Q2KHR2 1363 aa23.17■■□□□ 1.3
GTF3C1-207ENST00000567806 MYPNQ86TC9 1320 aa23.17■■□□□ 1.3
GTF3C1-207ENST00000567806 TBC1D12O60347 775 aa23.17■■□□□ 1.3
GTF3C1-207ENST00000567806 SLURP2P0DP57 97 aa23.17■■□□□ 1.3
GTF3C1-207ENST00000567806 BCRP11274 1271 aa23.17■■□□□ 1.3
GTF3C1-207ENST00000567806 GRK4P32298 578 aa23.17■■□□□ 1.3
GTF3C1-207ENST00000567806 NSUN4Q96CB9 384 aaKnown RBP23.17■■□□□ 1.3
GTF3C1-207ENST00000567806 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.17■■□□□ 1.3
GTF3C1-207ENST00000567806 LRP2BPQ9P2M1 347 aa23.17■■□□□ 1.3
GTF3C1-207ENST00000567806 BIN2Q9UBW5 565 aaPredicted RBP23.17■■□□□ 1.3
GTF3C1-207ENST00000567806 ARID4AP29374 1257 aaPredicted RBP23.16■■□□□ 1.3
GTF3C1-207ENST00000567806 PI16Q6UXB8 463 aa23.16■■□□□ 1.3
GTF3C1-207ENST00000567806 ZNF384Q8TF68 577 aa23.16■■□□□ 1.3
GTF3C1-207ENST00000567806 SLC45A1Q9Y2W3 748 aa23.16■■□□□ 1.3
GTF3C1-207ENST00000567806 TRIM75PA6NK02 468 aa23.15■■□□□ 1.3
GTF3C1-207ENST00000567806 HABP4Q5JVS0 413 aaKnown RBP23.15■■□□□ 1.3
GTF3C1-207ENST00000567806 ZKSCAN2Q63HK3 967 aa23.15■■□□□ 1.3
GTF3C1-207ENST00000567806 NOL10Q9BSC4 688 aaKnown RBP23.15■■□□□ 1.3
GTF3C1-207ENST00000567806 MKI67P46013 3256 aaKnown RBP23.15■■□□□ 1.3
GTF3C1-207ENST00000567806 OS9Q13438 667 aaPredicted RBP23.14■■□□□ 1.29
GTF3C1-207ENST00000567806 MTFR1Q15390 333 aa23.14■■□□□ 1.29
GTF3C1-207ENST00000567806 MIER1Q8N108 512 aa23.14■■□□□ 1.29
GTF3C1-207ENST00000567806 TMEM57Q8N5G2 664 aa23.14■■□□□ 1.29
GTF3C1-207ENST00000567806 NKX2-3Q8TAU0 364 aa23.14■■□□□ 1.29
GTF3C1-207ENST00000567806 SMCR8Q8TEV9 937 aaPredicted RBP23.14■■□□□ 1.29
GTF3C1-207ENST00000567806 ZSWIM8A7E2V4 1837 aa23.14■■□□□ 1.29
GTF3C1-207ENST00000567806 MCAMP43121 646 aa23.13■■□□□ 1.29
GTF3C1-207ENST00000567806 UBXN2AP68543 259 aa23.13■■□□□ 1.29
GTF3C1-207ENST00000567806 PRKCZQ05513 592 aa23.13■■□□□ 1.29
GTF3C1-207ENST00000567806 CCDC158Q5M9N0 1113 aa23.13■■□□□ 1.29
GTF3C1-207ENST00000567806 TEX11Q8IYF3 940 aa23.13■■□□□ 1.29
GTF3C1-207ENST00000567806 OSBPL5Q9H0X9 879 aaPredicted RBP23.13■■□□□ 1.29
GTF3C1-207ENST00000567806 TTC39AQ5SRH9 613 aa23.12■■□□□ 1.29
GTF3C1-207ENST00000567806 GPR108Q9NPR9 543 aa23.12■■□□□ 1.29
GTF3C1-207ENST00000567806 DOCK2Q92608 1830 aa23.12■■□□□ 1.29
GTF3C1-207ENST00000567806 FAM196BA6NMK8 535 aa23.11■■□□□ 1.29
GTF3C1-207ENST00000567806 BAG3O95817 575 aa23.11■■□□□ 1.29
GTF3C1-207ENST00000567806 CCL5P13501 91 aa23.11■■□□□ 1.29
GTF3C1-207ENST00000567806 ATP8B2P98198 1209 aa23.11■■□□□ 1.29
GTF3C1-207ENST00000567806 CCDC84Q86UT8 332 aaPredicted RBP23.11■■□□□ 1.29
GTF3C1-207ENST00000567806 SLAIN1Q8ND83 568 aa23.11■■□□□ 1.29
GTF3C1-207ENST00000567806 RNF208Q9H0X6 261 aa23.11■■□□□ 1.29
GTF3C1-207ENST00000567806 SNRKQ9NRH2 765 aa23.11■■□□□ 1.29
GTF3C1-207ENST00000567806 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.11■■□□□ 1.29
GTF3C1-207ENST00000567806 AGTPBP1Q9UPW5 1226 aa23.11■■□□□ 1.29
GTF3C1-207ENST00000567806 POLA2Q14181 598 aa23.1■■□□□ 1.29
GTF3C1-207ENST00000567806 NAA16Q6N069 864 aaPredicted RBP23.1■■□□□ 1.29
GTF3C1-207ENST00000567806 PNMA3Q9UL41 463 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms