RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 ENTPD3O75355 529 aa20.84■□□□□ 0.93
COMMD4-220ENST00000567720 BAG3O95817 575 aa20.84■□□□□ 0.93
COMMD4-220ENST00000567720 PLCG2P16885 1265 aa20.84■□□□□ 0.93
COMMD4-220ENST00000567720 SH3BP5LQ7L8J4 393 aa20.84■□□□□ 0.93
COMMD4-220ENST00000567720 FLT1P17948 1338 aa20.83■□□□□ 0.93
COMMD4-220ENST00000567720 TTLL12Q14166 644 aaPredicted RBP20.83■□□□□ 0.93
COMMD4-220ENST00000567720 SUPT20HL1Q3ZLR7 823 aa20.83■□□□□ 0.93
COMMD4-220ENST00000567720 KLRG1Q96E93 195 aa20.83■□□□□ 0.93
COMMD4-220ENST00000567720 OSBPL3Q9H4L5 887 aa20.83■□□□□ 0.93
COMMD4-220ENST00000567720 NPM3O75607 178 aaKnown RBP20.82■□□□□ 0.92
COMMD4-220ENST00000567720 LCORLQ8N3X6 602 aa20.82■□□□□ 0.92
COMMD4-220ENST00000567720 HHIPL1Q96JK4 782 aa20.82■□□□□ 0.92
COMMD4-220ENST00000567720 OSBPL5Q9H0X9 879 aaPredicted RBP20.82■□□□□ 0.92
COMMD4-220ENST00000567720 ANGEL1Q9UNK9 670 aaKnown RBP20.82■□□□□ 0.92
COMMD4-220ENST00000567720 PHIPQ8WWQ0 1821 aa20.82■□□□□ 0.92
COMMD4-220ENST00000567720 MAGEB6P1A0A0J9YX57 407 aa20.81■□□□□ 0.92
COMMD4-220ENST00000567720 DDTLA6NHG4 134 aaPredicted RBP20.81■□□□□ 0.92
COMMD4-220ENST00000567720 UBE2Q2LH0YL09 131 aa20.81■□□□□ 0.92
COMMD4-220ENST00000567720 UBE3CQ15386 1083 aa20.81■□□□□ 0.92
COMMD4-220ENST00000567720 MAP3K11Q16584 847 aa20.81■□□□□ 0.92
COMMD4-220ENST00000567720 DEFB115Q30KQ5 88 aa20.81■□□□□ 0.92
COMMD4-220ENST00000567720 CYP4F22Q6NT55 531 aa20.81■□□□□ 0.92
COMMD4-220ENST00000567720 CENPQQ7L2Z9 268 aaPredicted RBP20.81■□□□□ 0.92
COMMD4-220ENST00000567720 TGFBRAP1Q8WUH2 860 aa20.81■□□□□ 0.92
COMMD4-220ENST00000567720 FSD1Q9BTV5 496 aa20.81■□□□□ 0.92
COMMD4-220ENST00000567720 MBD4O95243 580 aa20.8■□□□□ 0.92
COMMD4-220ENST00000567720 VEGFBP49765 207 aa20.8■□□□□ 0.92
COMMD4-220ENST00000567720 ZSCAN25Q6NSZ9 544 aa20.8■□□□□ 0.92
COMMD4-220ENST00000567720 PAXIP1Q6ZW49 1069 aaPredicted RBP20.8■□□□□ 0.92
COMMD4-220ENST00000567720 ARMC9Q7Z3E5 817 aa20.8■□□□□ 0.92
COMMD4-220ENST00000567720 CERS3Q8IU89 383 aa20.8■□□□□ 0.92
COMMD4-220ENST00000567720 MAPKAPK5Q8IW41 473 aa20.8■□□□□ 0.92
COMMD4-220ENST00000567720 CSRNP1Q96S65 589 aa20.8■□□□□ 0.92
COMMD4-220ENST00000567720 PTPRFP10586 1907 aa20.8■□□□□ 0.92
COMMD4-220ENST00000567720 PPP1R12BO60237 982 aaPredicted RBP20.79■□□□□ 0.92
COMMD4-220ENST00000567720 USP2O75604 605 aaPredicted RBP20.79■□□□□ 0.92
COMMD4-220ENST00000567720 CAPNS2Q96L46 248 aa20.79■□□□□ 0.92
COMMD4-220ENST00000567720 PUS7LQ9H0K6 701 aaKnown RBP20.79■□□□□ 0.92
COMMD4-220ENST00000567720 ARMT1Q9H993 441 aa20.79■□□□□ 0.92
COMMD4-220ENST00000567720 RNF113AO15541 343 aaKnown RBP20.78■□□□□ 0.92
COMMD4-220ENST00000567720 SLURP2P0DP57 97 aa20.78■□□□□ 0.92
COMMD4-220ENST00000567720 LDLRAD1Q5T700 205 aa20.78■□□□□ 0.92
COMMD4-220ENST00000567720 RGMBQ6NW40 437 aa20.78■□□□□ 0.92
COMMD4-220ENST00000567720 RASAL3Q86YV0 1011 aa20.78■□□□□ 0.92
COMMD4-220ENST00000567720 ZSCAN29Q8IWY8 852 aaPredicted RBP20.78■□□□□ 0.92
COMMD4-220ENST00000567720 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.78■□□□□ 0.92
COMMD4-220ENST00000567720 ZFYP08048 801 aaPredicted RBP20.77■□□□□ 0.92
COMMD4-220ENST00000567720 SLC10A3P09131 477 aa20.77■□□□□ 0.92
COMMD4-220ENST00000567720 GRM1Q13255 1194 aa20.77■□□□□ 0.92
COMMD4-220ENST00000567720 APPBP2Q92624 585 aa20.77■□□□□ 0.92
COMMD4-220ENST00000567720 OSBP2Q969R2 916 aa20.77■□□□□ 0.92
COMMD4-220ENST00000567720 EVI5LQ96CN4 794 aa20.77■□□□□ 0.92
COMMD4-220ENST00000567720 HOOK2Q96ED9 719 aa20.77■□□□□ 0.92
COMMD4-220ENST00000567720 CCDC136Q96JN2 1154 aa20.77■□□□□ 0.92
COMMD4-220ENST00000567720 CLMNQ96JQ2 1002 aa20.77■□□□□ 0.92
COMMD4-220ENST00000567720 WDR33Q9C0J8 1336 aaKnown RBP20.77■□□□□ 0.91
COMMD4-220ENST00000567720 FAM155AB1AL88 458 aaPredicted RBP20.76■□□□□ 0.91
COMMD4-220ENST00000567720 IREB2P48200 963 aaKnown RBP20.76■□□□□ 0.91
COMMD4-220ENST00000567720 DCAF15Q66K64 600 aa20.76■□□□□ 0.91
COMMD4-220ENST00000567720 MIGA2Q7L4E1 593 aa20.76■□□□□ 0.91
COMMD4-220ENST00000567720 SDR42E1Q8WUS8 393 aa20.76■□□□□ 0.91
COMMD4-220ENST00000567720 CRNKL1Q9BZJ0 848 aaKnown RBP20.76■□□□□ 0.91
COMMD4-220ENST00000567720 M0R2C6 588 aa20.75■□□□□ 0.91
COMMD4-220ENST00000567720 GSPT1P15170 499 aaKnown RBP20.75■□□□□ 0.91
COMMD4-220ENST00000567720 USP5P45974 858 aa20.75■□□□□ 0.91
COMMD4-220ENST00000567720 ZNF157P51786 506 aaPredicted RBP20.75■□□□□ 0.91
COMMD4-220ENST00000567720 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.75■□□□□ 0.91
COMMD4-220ENST00000567720 SKAP1Q86WV1 359 aa20.75■□□□□ 0.91
COMMD4-220ENST00000567720 AIDAQ96BJ3 306 aa20.75■□□□□ 0.91
COMMD4-220ENST00000567720 WRNIP1Q96S55 665 aa20.75■□□□□ 0.91
COMMD4-220ENST00000567720 ZNF341Q9BYN7 854 aa20.75■□□□□ 0.91
COMMD4-220ENST00000567720 SAP30BPQ9UHR5 308 aaKnown RBP20.75■□□□□ 0.91
COMMD4-220ENST00000567720 LAMA4Q16363 1823 aa20.75■□□□□ 0.91
COMMD4-220ENST00000567720 FAM196BA6NMK8 535 aa20.74■□□□□ 0.91
COMMD4-220ENST00000567720 TRIM6-TRIM34B2RNG4 842 aa20.74■□□□□ 0.91
COMMD4-220ENST00000567720 PRKAB2O43741 272 aa20.74■□□□□ 0.91
COMMD4-220ENST00000567720 AOC2O75106 756 aa20.74■□□□□ 0.91
COMMD4-220ENST00000567720 ECE1P42892 770 aa20.74■□□□□ 0.91
COMMD4-220ENST00000567720 VGLL4Q14135 290 aa20.74■□□□□ 0.91
COMMD4-220ENST00000567720 SLC4A8Q2Y0W8 1093 aa20.74■□□□□ 0.91
COMMD4-220ENST00000567720 TTC22Q5TAA0 569 aa20.74■□□□□ 0.91
COMMD4-220ENST00000567720 JMYQ8N9B5 988 aa20.74■□□□□ 0.91
COMMD4-220ENST00000567720 SEC62Q99442 399 aaKnown RBP20.74■□□□□ 0.91
COMMD4-220ENST00000567720 PALD1Q9ULE6 856 aa20.74■□□□□ 0.91
COMMD4-220ENST00000567720 LRRFIP1Q32MZ4 808 aaKnown RBP20.73■□□□□ 0.91
COMMD4-220ENST00000567720 ZMYM1Q5SVZ6 1142 aa20.73■□□□□ 0.91
COMMD4-220ENST00000567720 ANKRD13AQ8IZ07 590 aa20.73■□□□□ 0.91
COMMD4-220ENST00000567720 DNAJC18Q9H819 358 aa20.73■□□□□ 0.91
COMMD4-220ENST00000567720 GPAA1O43292 621 aa20.72■□□□□ 0.91
COMMD4-220ENST00000567720 INPP5BP32019 993 aa20.72■□□□□ 0.91
COMMD4-220ENST00000567720 MAP3K10Q02779 954 aa20.72■□□□□ 0.91
COMMD4-220ENST00000567720 RILPL2Q969X0 211 aa20.72■□□□□ 0.91
COMMD4-220ENST00000567720 ZIC5Q96T25 663 aa20.72■□□□□ 0.91
COMMD4-220ENST00000567720 DHX36Q9H2U1 1008 aaKnown RBP20.72■□□□□ 0.91
COMMD4-220ENST00000567720 DCP1AQ9NPI6 582 aaPredicted RBP20.72■□□□□ 0.91
COMMD4-220ENST00000567720 ZNF112Q9UJU3 913 aa20.72■□□□□ 0.91
COMMD4-220ENST00000567720 SNCAIPQ9Y6H5 919 aa20.72■□□□□ 0.91
COMMD4-220ENST00000567720 UNCXA6NJT0 531 aa20.71■□□□□ 0.91
COMMD4-220ENST00000567720 PHF20L1A8MW92 1017 aa20.71■□□□□ 0.91
COMMD4-220ENST00000567720 EVX2Q03828 476 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms