RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 RLBP1P12271 317 aa13.92□□□□□ -0.18
NIFKP4-201ENST00000567275 NFIAQ12857 509 aa13.92□□□□□ -0.18
NIFKP4-201ENST00000567275 CACNA2D2Q9NY47 1150 aa13.92□□□□□ -0.18
NIFKP4-201ENST00000567275 PCDHA4Q9UN74 947 aa13.92□□□□□ -0.18
NIFKP4-201ENST00000567275 NFICP08651 508 aa13.91□□□□□ -0.18
NIFKP4-201ENST00000567275 LIG3P49916 1009 aa13.91□□□□□ -0.18
NIFKP4-201ENST00000567275 RPS26P62854 115 aaKnown RBP13.91□□□□□ -0.18
NIFKP4-201ENST00000567275 MAP7Q14244 749 aa13.91□□□□□ -0.18
NIFKP4-201ENST00000567275 EZH1Q92800 747 aaPredicted RBP13.91□□□□□ -0.18
NIFKP4-201ENST00000567275 ZC3H12AQ5D1E8 599 aaKnown RBP13.9□□□□□ -0.18
NIFKP4-201ENST00000567275 DBNDD2Q9BQY9 259 aa13.9□□□□□ -0.18
NIFKP4-201ENST00000567275 ACSS3Q9H6R3 686 aa13.9□□□□□ -0.18
NIFKP4-201ENST00000567275 MRPL58Q14197 206 aaKnown RBP13.89□□□□□ -0.19
NIFKP4-201ENST00000567275 SEMA6CQ9H3T2 930 aa13.89□□□□□ -0.19
NIFKP4-201ENST00000567275 DISC1Q9NRI5 854 aa13.89□□□□□ -0.19
NIFKP4-201ENST00000567275 CCDC9Q9Y3X0 531 aaKnown RBP13.89□□□□□ -0.19
NIFKP4-201ENST00000567275 DAGLAQ9Y4D2 1042 aa13.89□□□□□ -0.19
NIFKP4-201ENST00000567275 RBM47A0AV96 593 aaKnown RBP13.88□□□□□ -0.19
NIFKP4-201ENST00000567275 RNGTTO60942 597 aaKnown RBP13.88□□□□□ -0.19
NIFKP4-201ENST00000567275 PICK1Q9NRD5 415 aa13.88□□□□□ -0.19
NIFKP4-201ENST00000567275 ERVK-24P63145 666 aa13.87□□□□□ -0.19
NIFKP4-201ENST00000567275 TTLL4Q14679 1199 aa13.87□□□□□ -0.19
NIFKP4-201ENST00000567275 AGMOQ6ZNB7 445 aa13.87□□□□□ -0.19
NIFKP4-201ENST00000567275 CSADQ9Y600 493 aa13.87□□□□□ -0.19
NIFKP4-201ENST00000567275 DCDC2CA8MYV0 355 aa13.86□□□□□ -0.19
NIFKP4-201ENST00000567275 HCLS1P14317 486 aaPredicted RBP13.86□□□□□ -0.19
NIFKP4-201ENST00000567275 ELMO3Q96BJ8 720 aa13.86□□□□□ -0.19
NIFKP4-201ENST00000567275 MFSD14AQ96MC6 490 aa13.86□□□□□ -0.19
NIFKP4-201ENST00000567275 ZMYM1Q5SVZ6 1142 aa13.85□□□□□ -0.19
NIFKP4-201ENST00000567275 SMYD4Q8IYR2 804 aaPredicted RBP13.85□□□□□ -0.19
NIFKP4-201ENST00000567275 GIMAP7Q8NHV1 300 aa13.85□□□□□ -0.19
NIFKP4-201ENST00000567275 MIR1-1HGQ9H1L0 117 aa13.85□□□□□ -0.19
NIFKP4-201ENST00000567275 LGR6Q9HBX8 967 aa13.85□□□□□ -0.19
NIFKP4-201ENST00000567275 SSU72Q9NP77 194 aaKnown RBP13.85□□□□□ -0.19
NIFKP4-201ENST00000567275 PCDHB5Q9Y5E4 795 aa13.85□□□□□ -0.19
NIFKP4-201ENST00000567275 PTPN11Q06124 597 aaPredicted RBP13.84□□□□□ -0.19
NIFKP4-201ENST00000567275 SEPT6Q14141 434 aa13.84□□□□□ -0.19
NIFKP4-201ENST00000567275 FBXL6Q8N531 539 aa13.84□□□□□ -0.19
NIFKP4-201ENST00000567275 GAL3ST3Q96A11 431 aa13.84□□□□□ -0.19
NIFKP4-201ENST00000567275 PPM1JQ5JR12 505 aa13.83□□□□□ -0.2
NIFKP4-201ENST00000567275 C12orf40Q86WS4 652 aa13.83□□□□□ -0.2
NIFKP4-201ENST00000567275 RELL1Q8IUW5 271 aa13.83□□□□□ -0.2
NIFKP4-201ENST00000567275 RNF214Q8ND24 703 aa13.83□□□□□ -0.2
NIFKP4-201ENST00000567275 TBC1D32Q96NH3 1257 aa13.83□□□□□ -0.2
NIFKP4-201ENST00000567275 PRKAG2Q9UGJ0 569 aa13.83□□□□□ -0.2
NIFKP4-201ENST00000567275 TLR6Q9Y2C9 796 aa13.83□□□□□ -0.2
NIFKP4-201ENST00000567275 SHKBP1Q8TBC3 707 aa13.82□□□□□ -0.2
NIFKP4-201ENST00000567275 WDR64B1ANS9 1081 aa13.81□□□□□ -0.2
NIFKP4-201ENST00000567275 F6X3S4 739 aa13.81□□□□□ -0.2
NIFKP4-201ENST00000567275 TFE3P19532 575 aaPredicted RBP13.81□□□□□ -0.2
NIFKP4-201ENST00000567275 PWP1Q13610 501 aa13.81□□□□□ -0.2
NIFKP4-201ENST00000567275 DIEXFQ68CQ4 756 aaKnown RBP13.81□□□□□ -0.2
NIFKP4-201ENST00000567275 HDXQ7Z353 690 aa13.81□□□□□ -0.2
NIFKP4-201ENST00000567275 ATG3Q9NT62 314 aa13.81□□□□□ -0.2
NIFKP4-201ENST00000567275 PCOLCE2Q9UKZ9 415 aa13.81□□□□□ -0.2
NIFKP4-201ENST00000567275 INPP5AQ14642 412 aa13.8□□□□□ -0.2
NIFKP4-201ENST00000567275 LRFN4Q6PJG9 635 aa13.8□□□□□ -0.2
NIFKP4-201ENST00000567275 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.8□□□□□ -0.2
NIFKP4-201ENST00000567275 TMEM87AQ8NBN3 555 aa13.8□□□□□ -0.2
NIFKP4-201ENST00000567275 PHC3Q8NDX5 983 aa13.8□□□□□ -0.2
NIFKP4-201ENST00000567275 RGS22Q8NE09 1264 aa13.8□□□□□ -0.2
NIFKP4-201ENST00000567275 RNF112Q9ULX5 631 aa13.8□□□□□ -0.2
NIFKP4-201ENST00000567275 NEFMP07197 916 aa13.79□□□□□ -0.2
NIFKP4-201ENST00000567275 GBP2P32456 591 aaPredicted RBP13.79□□□□□ -0.2
NIFKP4-201ENST00000567275 ZAR1Q86SH2 424 aa13.79□□□□□ -0.2
NIFKP4-201ENST00000567275 ZDHHC13Q8IUH4 622 aa13.79□□□□□ -0.2
NIFKP4-201ENST00000567275 PLPPR2Q96GM1 343 aa13.79□□□□□ -0.2
NIFKP4-201ENST00000567275 RSRP1Q9BUV0 290 aa13.79□□□□□ -0.2
NIFKP4-201ENST00000567275 PRAMEF27A3QJZ7 478 aa13.78□□□□□ -0.2
NIFKP4-201ENST00000567275 DYNC1LI2O43237 492 aaPredicted RBP13.78□□□□□ -0.2
NIFKP4-201ENST00000567275 WIPI1Q5MNZ9 446 aaPredicted RBP13.78□□□□□ -0.2
NIFKP4-201ENST00000567275 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.78□□□□□ -0.2
NIFKP4-201ENST00000567275 JARID2Q92833 1246 aaPredicted RBP13.78□□□□□ -0.2
NIFKP4-201ENST00000567275 ISL2Q96A47 359 aa13.78□□□□□ -0.2
NIFKP4-201ENST00000567275 OSBPL1AQ9BXW6 950 aa13.78□□□□□ -0.2
NIFKP4-201ENST00000567275 SNCAIPQ9Y6H5 919 aa13.78□□□□□ -0.2
NIFKP4-201ENST00000567275 FANCGO15287 622 aa13.77□□□□□ -0.21
NIFKP4-201ENST00000567275 F13BP05160 661 aa13.77□□□□□ -0.21
NIFKP4-201ENST00000567275 ADMP35318 185 aa13.77□□□□□ -0.21
NIFKP4-201ENST00000567275 SEZ6L2Q6UXD5 910 aa13.77□□□□□ -0.21
NIFKP4-201ENST00000567275 TMEM74Q96NL1 305 aa13.77□□□□□ -0.21
NIFKP4-201ENST00000567275 RING1Q06587 406 aa13.76□□□□□ -0.21
NIFKP4-201ENST00000567275 ZBTB37Q5TC79 503 aa13.76□□□□□ -0.21
NIFKP4-201ENST00000567275 CDC37L1Q7L3B6 337 aa13.76□□□□□ -0.21
NIFKP4-201ENST00000567275 HS2ST1Q7LGA3 356 aa13.76□□□□□ -0.21
NIFKP4-201ENST00000567275 C1GALT1Q9NS00 363 aa13.76□□□□□ -0.21
NIFKP4-201ENST00000567275 SCO2A0A1W2PP80 73 aa13.75□□□□□ -0.21
NIFKP4-201ENST00000567275 MINDY4BA8MYZ0 360 aa13.75□□□□□ -0.21
NIFKP4-201ENST00000567275 TGFB1P01137 390 aa13.75□□□□□ -0.21
NIFKP4-201ENST00000567275 CAMK2GQ13555 558 aaPredicted RBP13.75□□□□□ -0.21
NIFKP4-201ENST00000567275 TSNAXIP1Q2TAA8 658 aa13.75□□□□□ -0.21
NIFKP4-201ENST00000567275 METTL22Q9BUU2 404 aaPredicted RBP13.75□□□□□ -0.21
NIFKP4-201ENST00000567275 GGT7Q9UJ14 662 aa13.75□□□□□ -0.21
NIFKP4-201ENST00000567275 PF4P02776 101 aa13.74□□□□□ -0.21
NIFKP4-201ENST00000567275 CDK8P49336 464 aa13.74□□□□□ -0.21
NIFKP4-201ENST00000567275 LMNB2Q03252 620 aa13.74□□□□□ -0.21
NIFKP4-201ENST00000567275 CDK5R2Q13319 367 aa13.74□□□□□ -0.21
NIFKP4-201ENST00000567275 CYFIP1Q7L576 1253 aa13.74□□□□□ -0.21
NIFKP4-201ENST00000567275 SHISA5Q8N114 240 aa13.74□□□□□ -0.21
NIFKP4-201ENST00000567275 BACH2Q9BYV9 841 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms