RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 ENGASEQ8NFI3 743 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 SMARCC2Q8TAQ2 1214 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 XAGE2Q96GT9 111 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 PPP1R13BQ96KQ4 1090 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 ZCCHC17Q9NP64 241 aaKnown RBP7.48□□□□□ -1.21
GINS3-206ENST00000567143 CWC25Q9NXE8 425 aaPredicted RBP7.48□□□□□ -1.21
GINS3-206ENST00000567143 CCNL1Q9UK58 526 aaPredicted RBP7.48□□□□□ -1.21
GINS3-206ENST00000567143 C10orf71Q711Q0 1435 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 VGLL3A8MV65 326 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 ZNF213O14771 459 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 SLU7O95391 586 aaKnown RBP7.47□□□□□ -1.21
GINS3-206ENST00000567143 SYKP43405 635 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 ADKP55263 362 aaKnown RBP7.47□□□□□ -1.21
GINS3-206ENST00000567143 UBASH3AP57075 661 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 FANCCQ00597 558 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 FAM182BQ5T319 152 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 SLC9C2Q5TAH2 1124 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 RBM43Q6ZSC3 357 aaKnown RBP7.47□□□□□ -1.21
GINS3-206ENST00000567143 MNS1Q8NEH6 495 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 STAMQ92783 540 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 MRFAP1L1Q96HT8 127 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 ALG1Q9BT22 464 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 STK32BQ9NY57 414 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 KCNJ14Q9UNX9 436 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 MROH7-TTC4A0A0A0MT08 1334 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 GPAA1O43292 621 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 IL6STP40189 918 aaPredicted RBP7.47□□□□□ -1.21
GINS3-206ENST00000567143 EIF5P55010 431 aaKnown RBP7.47□□□□□ -1.21
GINS3-206ENST00000567143 STX17P56962 302 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 TRDNQ13061 729 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 CCDC158Q5M9N0 1113 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 ZMYM1Q5SVZ6 1142 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 NAA16Q6N069 864 aaPredicted RBP7.47□□□□□ -1.21
GINS3-206ENST00000567143 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.47□□□□□ -1.21
GINS3-206ENST00000567143 NUP133Q8WUM0 1156 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 CARD6Q9BX69 1037 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 IRX2Q9BZI1 471 aaPredicted RBP7.47□□□□□ -1.21
GINS3-206ENST00000567143 MTFR1LQ9H019 292 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 FANCLQ9NW38 375 aa7.47□□□□□ -1.21
GINS3-206ENST00000567143 EYA2O00167 538 aa7.46□□□□□ -1.21
GINS3-206ENST00000567143 CTAGE5O15320 804 aa7.46□□□□□ -1.21
GINS3-206ENST00000567143 TFRCP02786 760 aaKnown RBP7.46□□□□□ -1.21
GINS3-206ENST00000567143 FOXO4P98177 505 aa7.46□□□□□ -1.21
GINS3-206ENST00000567143 EXOSC10Q01780 885 aaKnown RBP7.46□□□□□ -1.21
GINS3-206ENST00000567143 GRIN1Q05586 938 aa7.46□□□□□ -1.21
GINS3-206ENST00000567143 METTL24Q5JXM2 366 aa7.46□□□□□ -1.21
GINS3-206ENST00000567143 TEX35Q5T0J7 233 aa7.46□□□□□ -1.21
GINS3-206ENST00000567143 ACSBG1Q96GR2 724 aa7.46□□□□□ -1.21
GINS3-206ENST00000567143 SLC26A6Q9BXS9 759 aa7.46□□□□□ -1.21
GINS3-206ENST00000567143 DDX41Q9UJV9 622 aaKnown RBP7.46□□□□□ -1.21
GINS3-206ENST00000567143 EP400Q96L91 3159 aa7.46□□□□□ -1.21
GINS3-206ENST00000567143 HMGB1P09429 215 aaKnown RBP7.46□□□□□ -1.22
GINS3-206ENST00000567143 AFDNP55196 1824 aaKnown RBP7.46□□□□□ -1.22
GINS3-206ENST00000567143 CTDSPL2Q05D32 466 aa7.46□□□□□ -1.22
GINS3-206ENST00000567143 ANO1Q5XXA6 986 aa7.46□□□□□ -1.22
GINS3-206ENST00000567143 ADALQ6DHV7 355 aa7.46□□□□□ -1.22
GINS3-206ENST00000567143 VPS37DQ86XT2 251 aa7.46□□□□□ -1.22
GINS3-206ENST00000567143 KRT222Q8N1A0 295 aa7.46□□□□□ -1.22
GINS3-206ENST00000567143 FBXO18Q8NFZ0 1043 aa7.46□□□□□ -1.22
GINS3-206ENST00000567143 CNNM1Q9NRU3 951 aa7.46□□□□□ -1.22
GINS3-206ENST00000567143 RNF216Q9NWF9 866 aaPredicted RBP7.46□□□□□ -1.22
GINS3-206ENST00000567143 MTMR7Q9Y216 660 aa7.46□□□□□ -1.22
GINS3-206ENST00000567143 BAZ2BQ9UIF8 2168 aaKnown RBP7.46□□□□□ -1.22
GINS3-206ENST00000567143 DUOX1Q9NRD9 1551 aa7.46□□□□□ -1.22
GINS3-206ENST00000567143 METAP2P50579 478 aaKnown RBP eCLIP7.46□□□□□ -1.22
GINS3-206ENST00000567143 ANTXR2P58335 489 aa7.46□□□□□ -1.22
GINS3-206ENST00000567143 TSGA10IPQ3SY00 556 aa7.46□□□□□ -1.22
GINS3-206ENST00000567143 NYAP1Q6ZVC0 841 aa7.46□□□□□ -1.22
GINS3-206ENST00000567143 GPIHBP1Q8IV16 184 aa7.46□□□□□ -1.22
GINS3-206ENST00000567143 CNNM3Q8NE01 707 aa7.46□□□□□ -1.22
GINS3-206ENST00000567143 ZNF397Q8NF99 534 aaPredicted RBP7.46□□□□□ -1.22
GINS3-206ENST00000567143 UBXN4Q92575 508 aa7.46□□□□□ -1.22
GINS3-206ENST00000567143 GTPBP4Q9BZE4 634 aaKnown RBP7.46□□□□□ -1.22
GINS3-206ENST00000567143 ZNF446Q9NWS9 450 aa7.46□□□□□ -1.22
GINS3-206ENST00000567143 ERVV-1B6SEH8 477 aa7.45□□□□□ -1.22
GINS3-206ENST00000567143 GNG11P61952 73 aa7.45□□□□□ -1.22
GINS3-206ENST00000567143 TPM4P67936 248 aa7.45□□□□□ -1.22
GINS3-206ENST00000567143 CLEC4GQ6UXB4 293 aa7.45□□□□□ -1.22
GINS3-206ENST00000567143 LDHAL6AQ6ZMR3 332 aa7.45□□□□□ -1.22
GINS3-206ENST00000567143 PLBD2Q8NHP8 589 aa7.45□□□□□ -1.22
GINS3-206ENST00000567143 EEF2KMTQ96G04 330 aa7.45□□□□□ -1.22
GINS3-206ENST00000567143 PODXL2Q9NZ53 605 aa7.45□□□□□ -1.22
GINS3-206ENST00000567143 LRRC37AA6NMS7 1700 aa7.45□□□□□ -1.22
GINS3-206ENST00000567143 UTYO14607 1347 aa7.45□□□□□ -1.22
GINS3-206ENST00000567143 SMIM22K7EJ46 135 aa7.45□□□□□ -1.22
GINS3-206ENST00000567143 NRDCO43847 1150 aa7.45□□□□□ -1.22
GINS3-206ENST00000567143 TOP1P11387 765 aaKnown RBP7.45□□□□□ -1.22
GINS3-206ENST00000567143 CDC27P30260 824 aa7.45□□□□□ -1.22
GINS3-206ENST00000567143 TM4SF1P30408 202 aa7.45□□□□□ -1.22
GINS3-206ENST00000567143 IL15P40933 162 aaPredicted RBP7.45□□□□□ -1.22
GINS3-206ENST00000567143 AFMP43652 599 aa7.45□□□□□ -1.22
GINS3-206ENST00000567143 CLCN6P51797 869 aa7.45□□□□□ -1.22
GINS3-206ENST00000567143 LONRF3Q496Y0 759 aa7.45□□□□□ -1.22
GINS3-206ENST00000567143 KRT40Q6A162 431 aa7.45□□□□□ -1.22
GINS3-206ENST00000567143 CYB5R4Q7L1T6 521 aa7.45□□□□□ -1.22
GINS3-206ENST00000567143 TBC1D10CQ8IV04 446 aa7.45□□□□□ -1.22
GINS3-206ENST00000567143 SMYD4Q8IYR2 804 aaPredicted RBP7.45□□□□□ -1.22
GINS3-206ENST00000567143 MIGA1Q8NAN2 632 aa7.45□□□□□ -1.22
GINS3-206ENST00000567143 FEZ1Q99689 392 aa7.45□□□□□ -1.22
GINS3-206ENST00000567143 LZTFL1Q9NQ48 299 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms