RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 CACNB3P54284 484 aa12.42□□□□□ -0.42
CAPN3-216ENST00000567071 NOL9Q5SY16 702 aaKnown RBP12.42□□□□□ -0.42
CAPN3-216ENST00000567071 DIEXFQ68CQ4 756 aaKnown RBP12.42□□□□□ -0.42
CAPN3-216ENST00000567071 PRRT2Q7Z6L0 340 aaPredicted RBP12.42□□□□□ -0.42
CAPN3-216ENST00000567071 ZNF576Q9H609 170 aa12.42□□□□□ -0.42
CAPN3-216ENST00000567071 PRDM5Q9NQX1 630 aaPredicted RBP12.42□□□□□ -0.42
CAPN3-216ENST00000567071 PICK1Q9NRD5 415 aa12.42□□□□□ -0.42
CAPN3-216ENST00000567071 DDX58O95786 925 aaKnown RBP12.41□□□□□ -0.42
CAPN3-216ENST00000567071 ATN1P54259 1190 aaPredicted RBP12.41□□□□□ -0.42
CAPN3-216ENST00000567071 RTP1P59025 263 aa12.41□□□□□ -0.42
CAPN3-216ENST00000567071 KRT24Q2M2I5 525 aa12.41□□□□□ -0.42
CAPN3-216ENST00000567071 MAP3K21Q5TCX8 1036 aa12.41□□□□□ -0.42
CAPN3-216ENST00000567071 TRIB2Q92519 343 aa12.41□□□□□ -0.42
CAPN3-216ENST00000567071 TEKT1Q969V4 418 aa12.41□□□□□ -0.42
CAPN3-216ENST00000567071 ATP11BQ9Y2G3 1177 aa12.41□□□□□ -0.42
CAPN3-216ENST00000567071 ZKSCAN1P17029 563 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-216ENST00000567071 GCLCP48506 637 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-216ENST00000567071 HDLBPQ00341 1268 aaKnown RBP12.4□□□□□ -0.42
CAPN3-216ENST00000567071 POTEEQ6S8J3 1075 aa12.4□□□□□ -0.42
CAPN3-216ENST00000567071 BADQ92934 168 aa12.4□□□□□ -0.42
CAPN3-216ENST00000567071 NECAB3Q96P71 396 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-216ENST00000567071 PLEKHF1Q96S99 279 aa12.4□□□□□ -0.42
CAPN3-216ENST00000567071 METTL22Q9BUU2 404 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-216ENST00000567071 EPHX3Q9H6B9 360 aa12.4□□□□□ -0.42
CAPN3-216ENST00000567071 ZNF112Q9UJU3 913 aa12.4□□□□□ -0.42
CAPN3-216ENST00000567071 ZHX2Q9Y6X8 837 aa12.4□□□□□ -0.42
CAPN3-216ENST00000567071 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.39□□□□□ -0.43
CAPN3-216ENST00000567071 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.39□□□□□ -0.43
CAPN3-216ENST00000567071 GPR37L1O60883 481 aa12.39□□□□□ -0.43
CAPN3-216ENST00000567071 TAF5LO75529 589 aa12.39□□□□□ -0.43
CAPN3-216ENST00000567071 CYP2B6P20813 491 aa12.39□□□□□ -0.43
CAPN3-216ENST00000567071 PPP2R1AP30153 589 aa12.39□□□□□ -0.43
CAPN3-216ENST00000567071 RIPK4P57078 832 aa12.39□□□□□ -0.43
CAPN3-216ENST00000567071 CCDC85BQ15834 202 aaPredicted RBP12.39□□□□□ -0.43
CAPN3-216ENST00000567071 TIFAQ96CG3 184 aa12.39□□□□□ -0.43
CAPN3-216ENST00000567071 GJD2Q9UKL4 321 aa12.39□□□□□ -0.43
CAPN3-216ENST00000567071 LAS1LQ9Y4W2 734 aaKnown RBP12.39□□□□□ -0.43
CAPN3-216ENST00000567071 SNAP23O00161 211 aa12.38□□□□□ -0.43
CAPN3-216ENST00000567071 NEXNQ0ZGT2 675 aa12.38□□□□□ -0.43
CAPN3-216ENST00000567071 LHX8Q68G74 356 aa12.38□□□□□ -0.43
CAPN3-216ENST00000567071 SOCS4Q8WXH5 440 aa12.38□□□□□ -0.43
CAPN3-216ENST00000567071 NUDT12Q9BQG2 462 aa12.38□□□□□ -0.43
CAPN3-216ENST00000567071 CXXC1Q9P0U4 656 aaPredicted RBP12.38□□□□□ -0.43
CAPN3-216ENST00000567071 AGTPBP1Q9UPW5 1226 aa12.38□□□□□ -0.43
CAPN3-216ENST00000567071 FRMPD3Q5JV73 1810 aa12.37□□□□□ -0.43
CAPN3-216ENST00000567071 PTPRFP10586 1907 aa12.37□□□□□ -0.43
CAPN3-216ENST00000567071 XRCC5P13010 732 aaKnown RBP12.37□□□□□ -0.43
CAPN3-216ENST00000567071 IGFBP4P22692 258 aa12.37□□□□□ -0.43
CAPN3-216ENST00000567071 CACNB2Q08289 660 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-216ENST00000567071 PABPC4Q13310 644 aaKnown RBP eCLIP12.37□□□□□ -0.43
CAPN3-216ENST00000567071 FAM151AQ8WW52 585 aa12.37□□□□□ -0.43
CAPN3-216ENST00000567071 MAST3O60307 1309 aa12.37□□□□□ -0.43
CAPN3-216ENST00000567071 ANKRD18BA2A2Z9 1011 aa12.36□□□□□ -0.43
CAPN3-216ENST00000567071 MSCO60682 206 aa12.36□□□□□ -0.43
CAPN3-216ENST00000567071 BMP1P13497 986 aa12.36□□□□□ -0.43
CAPN3-216ENST00000567071 SCYL3Q8IZE3 742 aa12.36□□□□□ -0.43
CAPN3-216ENST00000567071 TDRD7Q8NHU6 1098 aaKnown RBP12.36□□□□□ -0.43
CAPN3-216ENST00000567071 TBC1D22AQ8WUA7 517 aa12.36□□□□□ -0.43
CAPN3-216ENST00000567071 ZDHHC15Q96MV8 337 aa12.36□□□□□ -0.43
CAPN3-216ENST00000567071 PRDM12Q9H4Q4 367 aa12.36□□□□□ -0.43
CAPN3-216ENST00000567071 PHAXQ9H814 394 aaKnown RBP12.36□□□□□ -0.43
CAPN3-216ENST00000567071 SMIM22K7EJ46 135 aa12.35□□□□□ -0.43
CAPN3-216ENST00000567071 DNM1LO00429 736 aa12.35□□□□□ -0.43
CAPN3-216ENST00000567071 CHL1O00533 1208 aa12.35□□□□□ -0.43
CAPN3-216ENST00000567071 FRAT2O75474 233 aaPredicted RBP12.35□□□□□ -0.43
CAPN3-216ENST00000567071 CCND3P30281 292 aaPredicted RBP12.35□□□□□ -0.43
CAPN3-216ENST00000567071 HIBADHP31937 336 aaKnown RBP12.35□□□□□ -0.43
CAPN3-216ENST00000567071 FOXK2Q01167 660 aa12.35□□□□□ -0.43
CAPN3-216ENST00000567071 UBE3BQ7Z3V4 1068 aa12.35□□□□□ -0.43
CAPN3-216ENST00000567071 CCAR1Q8IX12 1150 aaKnown RBP12.35□□□□□ -0.43
CAPN3-216ENST00000567071 AFG3L2Q9Y4W6 797 aa12.35□□□□□ -0.43
CAPN3-216ENST00000567071 MYBBP1AQ9BQG0 1328 aaKnown RBP12.35□□□□□ -0.43
CAPN3-216ENST00000567071 A0A1B0GUL6 1792 aa12.34□□□□□ -0.43
CAPN3-216ENST00000567071 TRIM75PA6NK02 468 aa12.34□□□□□ -0.43
CAPN3-216ENST00000567071 PLIN1O60240 522 aa12.34□□□□□ -0.43
CAPN3-216ENST00000567071 PTPRAP18433 802 aa12.34□□□□□ -0.43
CAPN3-216ENST00000567071 DUSP27Q5VZP5 1158 aa12.34□□□□□ -0.43
CAPN3-216ENST00000567071 CCDC129Q6ZRS4 1044 aa12.34□□□□□ -0.43
CAPN3-216ENST00000567071 PLXNB2O15031 1838 aa12.34□□□□□ -0.43
CAPN3-216ENST00000567071 ZDBF2Q9HCK1 2354 aa12.34□□□□□ -0.43
CAPN3-216ENST00000567071 FAM86C2PA6NEL3 165 aa12.33□□□□□ -0.44
CAPN3-216ENST00000567071 KBTBD13C9JR72 458 aa12.33□□□□□ -0.44
CAPN3-216ENST00000567071 RGS2P41220 211 aa12.33□□□□□ -0.44
CAPN3-216ENST00000567071 TCP10Q12799 353 aa12.33□□□□□ -0.44
CAPN3-216ENST00000567071 VPS37DQ86XT2 251 aa12.33□□□□□ -0.44
CAPN3-216ENST00000567071 PROCA1Q8NCQ7 364 aaPredicted RBP12.33□□□□□ -0.44
CAPN3-216ENST00000567071 MRIQ9BWK5 157 aa12.33□□□□□ -0.44
CAPN3-216ENST00000567071 CHMP4AQ9BY43 222 aa12.33□□□□□ -0.44
CAPN3-216ENST00000567071 CWC22Q9HCG8 908 aaKnown RBP12.33□□□□□ -0.44
CAPN3-216ENST00000567071 PDLIM7Q9NR12 457 aa12.33□□□□□ -0.44
CAPN3-216ENST00000567071 MAP3K2Q9Y2U5 619 aa12.33□□□□□ -0.44
CAPN3-216ENST00000567071 CNGA1P29973 690 aa12.32□□□□□ -0.44
CAPN3-216ENST00000567071 NHLH1Q02575 133 aa12.32□□□□□ -0.44
CAPN3-216ENST00000567071 CHAF1AQ13111 956 aaPredicted RBP12.32□□□□□ -0.44
CAPN3-216ENST00000567071 IFIT5Q13325 482 aaKnown RBP12.32□□□□□ -0.44
CAPN3-216ENST00000567071 SKIV2LQ15477 1246 aaKnown RBP12.32□□□□□ -0.44
CAPN3-216ENST00000567071 MFSD14CQ5VZR4 134 aa12.32□□□□□ -0.44
CAPN3-216ENST00000567071 SLC39A5Q6ZMH5 540 aa12.32□□□□□ -0.44
CAPN3-216ENST00000567071 ARRDC4Q8NCT1 418 aa12.32□□□□□ -0.44
CAPN3-216ENST00000567071 LPAR1Q92633 364 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms