RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, human

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-231	ENST00000566279	POTEI	P0CG38	1075 aa		11.96	□□□□□ -0.5
TCF4-231	ENST00000566279	POTEJ	P0CG39	1038 aa		11.96	□□□□□ -0.5
TCF4-231	ENST00000566279	XRCC6	P12956	609 aa	Known RBP eCLIP	11.96	□□□□□ -0.5
TCF4-231	ENST00000566279	NCL	P19338	710 aa	Known RBP	11.96	□□□□□ -0.5
TCF4-231	ENST00000566279	PRDX5	P30044	214 aa		11.96	□□□□□ -0.5
TCF4-231	ENST00000566279	HAND2	P61296	217 aa		11.96	□□□□□ -0.5
TCF4-231	ENST00000566279	IMMT	Q16891	758 aa	Known RBP	11.96	□□□□□ -0.5
TCF4-231	ENST00000566279	RBM26	Q5T8P6	1007 aa	Known RBP	11.96	□□□□□ -0.5
TCF4-231	ENST00000566279	CAVIN1	Q6NZI2	390 aa	Known RBP	11.96	□□□□□ -0.5
TCF4-231	ENST00000566279	MICALL2	Q8IY33	904 aa		11.96	□□□□□ -0.5
TCF4-231	ENST00000566279	TMEM87A	Q8NBN3	555 aa		11.96	□□□□□ -0.5
TCF4-231	ENST00000566279	GNL3L	Q9NVN8	582 aa	Known RBP	11.96	□□□□□ -0.5
TCF4-231	ENST00000566279	BRPF3	Q9ULD4	1205 aa		11.96	□□□□□ -0.5
TCF4-231	ENST00000566279	SAMD7	Q7Z3H4	446 aa		11.95	□□□□□ -0.5
TCF4-231	ENST00000566279	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.95	□□□□□ -0.5
TCF4-231	ENST00000566279	GDPD2	Q9HCC8	539 aa		11.95	□□□□□ -0.5
TCF4-231	ENST00000566279	ABCF2	Q9UG63	623 aa		11.95	□□□□□ -0.5
TCF4-231	ENST00000566279	FAM205A	Q6ZU69	1335 aa		11.95	□□□□□ -0.5
TCF4-231	ENST00000566279	PFKFB2	O60825	505 aa		11.95	□□□□□ -0.5
TCF4-231	ENST00000566279	MBD3	O95983	291 aa		11.95	□□□□□ -0.5
TCF4-231	ENST00000566279	FGD1	P98174	961 aa		11.95	□□□□□ -0.5
TCF4-231	ENST00000566279	SCRN1	Q12765	414 aa		11.95	□□□□□ -0.5
TCF4-231	ENST00000566279	LARP1B	Q659C4	914 aa	Known RBP	11.95	□□□□□ -0.5
TCF4-231	ENST00000566279	GML	Q99445	158 aa		11.95	□□□□□ -0.5
TCF4-231	ENST00000566279	GPRC5D	Q9NZD1	345 aa		11.95	□□□□□ -0.5
TCF4-231	ENST00000566279	CNOT7	Q9UIV1	285 aa	Known RBP	11.95	□□□□□ -0.5
TCF4-231	ENST00000566279	DENND2A	Q9ULE3	1009 aa		11.95	□□□□□ -0.5
TCF4-231	ENST00000566279	SCAF8	Q9UPN6	1271 aa	Known RBP	11.95	□□□□□ -0.5
TCF4-231	ENST00000566279	CNPY2	Q9Y2B0	182 aa		11.95	□□□□□ -0.5
TCF4-231	ENST00000566279	VPS37C	A5D8V6	355 aa	Predicted RBP	11.94	□□□□□ -0.5
TCF4-231	ENST00000566279	JAK2	O60674	1132 aa		11.94	□□□□□ -0.5
TCF4-231	ENST00000566279	PDC	P20941	246 aa		11.94	□□□□□ -0.5
TCF4-231	ENST00000566279	MRE11	P49959	708 aa		11.94	□□□□□ -0.5
TCF4-231	ENST00000566279	ZNF445	P59923	1031 aa		11.94	□□□□□ -0.5
TCF4-231	ENST00000566279	APOBR	Q0VD83	1088 aa		11.94	□□□□□ -0.5
TCF4-231	ENST00000566279	MAP3K12	Q12852	859 aa		11.94	□□□□□ -0.5
TCF4-231	ENST00000566279	ZSCAN23	Q3MJ62	389 aa		11.94	□□□□□ -0.5
TCF4-231	ENST00000566279	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.94	□□□□□ -0.5
TCF4-231	ENST00000566279	USP48	Q86UV5	1035 aa		11.94	□□□□□ -0.5
TCF4-231	ENST00000566279	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.94	□□□□□ -0.5
TCF4-231	ENST00000566279	FBXL16	Q8N461	479 aa		11.94	□□□□□ -0.5
TCF4-231	ENST00000566279	MAGEB6	Q8N7X4	407 aa		11.94	□□□□□ -0.5
TCF4-231	ENST00000566279	TRPM4	Q8TD43	1214 aa		11.94	□□□□□ -0.5
TCF4-231	ENST00000566279	STRBP	Q96SI9	672 aa	Known RBP	11.94	□□□□□ -0.5
TCF4-231	ENST00000566279	NBPF3	Q9H094	633 aa		11.94	□□□□□ -0.5
TCF4-231	ENST00000566279	GRPEL1	Q9HAV7	217 aa		11.94	□□□□□ -0.5
TCF4-231	ENST00000566279	RBM27	Q9P2N5	1060 aa	Known RBP	11.94	□□□□□ -0.5
TCF4-231	ENST00000566279	ATP6V1D	Q9Y5K8	247 aa		11.94	□□□□□ -0.5
TCF4-231	ENST00000566279	SCN4A	P35499	1836 aa		11.94	□□□□□ -0.5
TCF4-231	ENST00000566279	ASTN2	O75129	1339 aa	Predicted RBP	11.93	□□□□□ -0.5
TCF4-231	ENST00000566279	PDIA4	P13667	645 aa	Known RBP	11.93	□□□□□ -0.5
TCF4-231	ENST00000566279	CDC37L1	Q7L3B6	337 aa		11.93	□□□□□ -0.5
TCF4-231	ENST00000566279	CHST3	Q7LGC8	479 aa		11.93	□□□□□ -0.5
TCF4-231	ENST00000566279	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.93	□□□□□ -0.5
TCF4-231	ENST00000566279	ZNF213	O14771	459 aa		11.93	□□□□□ -0.5
TCF4-231	ENST00000566279	GADD45B	O75293	160 aa	Predicted RBP	11.93	□□□□□ -0.5
TCF4-231	ENST00000566279	DIXDC1	Q155Q3	683 aa		11.93	□□□□□ -0.5
TCF4-231	ENST00000566279	EAPP	Q56P03	285 aa	Predicted RBP	11.93	□□□□□ -0.5
TCF4-231	ENST00000566279	SMARCC2	Q8TAQ2	1214 aa		11.93	□□□□□ -0.5
TCF4-231	ENST00000566279	TMEM63C	Q9P1W3	806 aa		11.93	□□□□□ -0.5
TCF4-231	ENST00000566279	TTF2	Q9UNY4	1162 aa	Known RBP	11.93	□□□□□ -0.5
TCF4-231	ENST00000566279	USP17L8	P0C7I0	530 aa		11.92	□□□□□ -0.5
TCF4-231	ENST00000566279	LMOD1	P29536	600 aa	Predicted RBP	11.92	□□□□□ -0.5
TCF4-231	ENST00000566279	EPHX2	P34913	555 aa		11.92	□□□□□ -0.5
TCF4-231	ENST00000566279	HIRA	P54198	1017 aa	Predicted RBP	11.92	□□□□□ -0.5
TCF4-231	ENST00000566279	EVC	P57679	992 aa		11.92	□□□□□ -0.5
TCF4-231	ENST00000566279	AGBL3	Q8NEM8	1001 aa		11.92	□□□□□ -0.5
TCF4-231	ENST00000566279	ZNF384	Q8TF68	577 aa		11.92	□□□□□ -0.5
TCF4-231	ENST00000566279	AIDA	Q96BJ3	306 aa		11.92	□□□□□ -0.5
TCF4-231	ENST00000566279	LLPH	Q9BRT6	129 aa	Known RBP	11.92	□□□□□ -0.5
TCF4-231	ENST00000566279	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.92	□□□□□ -0.5
TCF4-231	ENST00000566279	HACL1	Q9UJ83	578 aa		11.92	□□□□□ -0.5
TCF4-231	ENST00000566279	SEMA3E	O15041	775 aa		11.92	□□□□□ -0.5
TCF4-231	ENST00000566279	MBD4	O95243	580 aa		11.92	□□□□□ -0.5
TCF4-231	ENST00000566279	ANTXR2	P58335	489 aa		11.92	□□□□□ -0.5
TCF4-231	ENST00000566279	DNM1	Q05193	864 aa	Known RBP	11.92	□□□□□ -0.5
TCF4-231	ENST00000566279	ALX1	Q15699	326 aa		11.92	□□□□□ -0.5
TCF4-231	ENST00000566279	TBC1D10C	Q8IV04	446 aa		11.92	□□□□□ -0.5
TCF4-231	ENST00000566279	NCOA7	Q8NI08	942 aa		11.92	□□□□□ -0.5
TCF4-231	ENST00000566279	WDR66	Q8TBY9	1149 aa		11.92	□□□□□ -0.5
TCF4-231	ENST00000566279	ZNF274	Q96GC6	653 aa	Predicted RBP	11.92	□□□□□ -0.5
TCF4-231	ENST00000566279	PANK2	Q9BZ23	570 aa		11.92	□□□□□ -0.5
TCF4-231	ENST00000566279	GPHN	Q9NQX3	736 aa	Predicted RBP	11.92	□□□□□ -0.5
TCF4-231	ENST00000566279	ZMYM6	O95789	1325 aa		11.91	□□□□□ -0.5
TCF4-231	ENST00000566279	WDR19	Q8NEZ3	1342 aa		11.91	□□□□□ -0.5
TCF4-231	ENST00000566279	KIF3C	O14782	793 aa		11.91	□□□□□ -0.5
TCF4-231	ENST00000566279	PRC1	O43663	620 aa		11.91	□□□□□ -0.5
TCF4-231	ENST00000566279	CTDNEP1	O95476	244 aa		11.91	□□□□□ -0.5
TCF4-231	ENST00000566279	PDIA3	P30101	505 aa	Known RBP	11.91	□□□□□ -0.5
TCF4-231	ENST00000566279	MCM5	P33992	734 aa		11.91	□□□□□ -0.5
TCF4-231	ENST00000566279	NSUN7	Q8NE18	718 aa	Known RBP	11.91	□□□□□ -0.5
TCF4-231	ENST00000566279	DPF2	Q92785	391 aa		11.91	□□□□□ -0.5
TCF4-231	ENST00000566279	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.91	□□□□□ -0.5
TCF4-231	ENST00000566279	MYOZ2	Q9NPC6	264 aa		11.91	□□□□□ -0.5
TCF4-231	ENST00000566279	MYH2	Q9UKX2	1941 aa		11.91	□□□□□ -0.5
TCF4-231	ENST00000566279	MYO3B	Q8WXR4	1341 aa		11.91	□□□□□ -0.5
TCF4-231	ENST00000566279	FIBP	O43427	364 aa		11.9	□□□□□ -0.5
TCF4-231	ENST00000566279	APP	P05067	770 aa		11.9	□□□□□ -0.5
TCF4-231	ENST00000566279	LDHB	P07195	334 aa	Known RBP	11.9	□□□□□ -0.5
TCF4-231	ENST00000566279	VEGFA	P15692	232 aa	Predicted RBP	11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms