RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 MVPQ14764 893 aaKnown RBP10.63□□□□□ -0.71
CAPN3-213ENST00000565173 ATF7IPQ6VMQ6 1270 aa10.63□□□□□ -0.71
CAPN3-213ENST00000565173 SH3TC2Q8TF17 1288 aa10.63□□□□□ -0.71
CAPN3-213ENST00000565173 TRIM47Q96LD4 638 aa10.63□□□□□ -0.71
CAPN3-213ENST00000565173 HMG20BQ9P0W2 317 aa10.63□□□□□ -0.71
CAPN3-213ENST00000565173 ABCF2Q9UG63 623 aa10.63□□□□□ -0.71
CAPN3-213ENST00000565173 AFG3L2Q9Y4W6 797 aa10.63□□□□□ -0.71
CAPN3-213ENST00000565173 MROH7-TTC4A0A0A0MT08 1334 aa10.62□□□□□ -0.71
CAPN3-213ENST00000565173 IPO8O15397 1037 aaKnown RBP10.62□□□□□ -0.71
CAPN3-213ENST00000565173 GNAI2P04899 355 aa10.62□□□□□ -0.71
CAPN3-213ENST00000565173 BTDP43251 543 aa10.62□□□□□ -0.71
CAPN3-213ENST00000565173 PSMC4P43686 418 aa10.62□□□□□ -0.71
CAPN3-213ENST00000565173 RHBDL3P58872 404 aa10.62□□□□□ -0.71
CAPN3-213ENST00000565173 KIF22Q14807 665 aa10.62□□□□□ -0.71
CAPN3-213ENST00000565173 SPTY2D1Q68D10 685 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-213ENST00000565173 PI16Q6UXB8 463 aa10.62□□□□□ -0.71
CAPN3-213ENST00000565173 DZIP1Q86YF9 867 aaKnown RBP10.62□□□□□ -0.71
CAPN3-213ENST00000565173 SLF2Q8IX21 1173 aa10.62□□□□□ -0.71
CAPN3-213ENST00000565173 SCYL3Q8IZE3 742 aa10.62□□□□□ -0.71
CAPN3-213ENST00000565173 NEUROD6Q96NK8 337 aa10.62□□□□□ -0.71
CAPN3-213ENST00000565173 TMEM106CQ9BVX2 250 aa10.62□□□□□ -0.71
CAPN3-213ENST00000565173 ZHX2Q9Y6X8 837 aa10.62□□□□□ -0.71
CAPN3-213ENST00000565173 AK9Q5TCS8 1911 aa10.62□□□□□ -0.71
CAPN3-213ENST00000565173 RANBP2P49792 3224 aaKnown RBP10.61□□□□□ -0.71
CAPN3-213ENST00000565173 A0A0G2JLL6 359 aaPredicted RBP10.61□□□□□ -0.71
CAPN3-213ENST00000565173 CTNND1O60716 968 aaKnown RBP10.61□□□□□ -0.71
CAPN3-213ENST00000565173 NPM3O75607 178 aaKnown RBP10.61□□□□□ -0.71
CAPN3-213ENST00000565173 CYP2C8P10632 490 aa10.61□□□□□ -0.71
CAPN3-213ENST00000565173 BCRP11274 1271 aa10.61□□□□□ -0.71
CAPN3-213ENST00000565173 ARID4AP29374 1257 aaPredicted RBP10.61□□□□□ -0.71
CAPN3-213ENST00000565173 PRMT2P55345 433 aa10.61□□□□□ -0.71
CAPN3-213ENST00000565173 TBC1D9Q6ZT07 1266 aa10.61□□□□□ -0.71
CAPN3-213ENST00000565173 ERICH6Q7L0X2 663 aa10.61□□□□□ -0.71
CAPN3-213ENST00000565173 PRRT2Q7Z6L0 340 aaPredicted RBP10.61□□□□□ -0.71
CAPN3-213ENST00000565173 SPATA5Q8NB90 893 aa10.61□□□□□ -0.71
CAPN3-213ENST00000565173 FRAT1Q92837 279 aaPredicted RBP10.61□□□□□ -0.71
CAPN3-213ENST00000565173 CLUAP1Q96AJ1 413 aa10.61□□□□□ -0.71
CAPN3-213ENST00000565173 NSUN4Q96CB9 384 aaKnown RBP10.61□□□□□ -0.71
CAPN3-213ENST00000565173 SRRDQ9UH36 339 aa10.61□□□□□ -0.71
CAPN3-213ENST00000565173 TBC1D12O60347 775 aa10.6□□□□□ -0.71
CAPN3-213ENST00000565173 ECM2O94769 699 aaPredicted RBP10.6□□□□□ -0.71
CAPN3-213ENST00000565173 MYCP01106 439 aaPredicted RBP10.6□□□□□ -0.71
CAPN3-213ENST00000565173 OSBPP22059 807 aa10.6□□□□□ -0.71
CAPN3-213ENST00000565173 MCAMP43121 646 aa10.6□□□□□ -0.71
CAPN3-213ENST00000565173 PICALMQ13492 652 aa10.6□□□□□ -0.71
CAPN3-213ENST00000565173 POLA2Q14181 598 aa10.6□□□□□ -0.71
CAPN3-213ENST00000565173 MTFR1Q15390 333 aa10.6□□□□□ -0.71
CAPN3-213ENST00000565173 SLC4A8Q2Y0W8 1093 aa10.6□□□□□ -0.71
CAPN3-213ENST00000565173 ZSCAN29Q8IWY8 852 aaPredicted RBP10.6□□□□□ -0.71
CAPN3-213ENST00000565173 TMEM57Q8N5G2 664 aa10.6□□□□□ -0.71
CAPN3-213ENST00000565173 PICK1Q9NRD5 415 aa10.6□□□□□ -0.71
CAPN3-213ENST00000565173 PCDH10Q9P2E7 1040 aa10.6□□□□□ -0.71
CAPN3-213ENST00000565173 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.6□□□□□ -0.71
CAPN3-213ENST00000565173 SZT2Q5T011 3432 aa10.6□□□□□ -0.71
CAPN3-213ENST00000565173 DOCK2Q92608 1830 aa10.6□□□□□ -0.71
CAPN3-213ENST00000565173 PHIPQ8WWQ0 1821 aa10.59□□□□□ -0.71
CAPN3-213ENST00000565173 FMNL1O95466 1100 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-213ENST00000565173 MAP4K4O95819 1239 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-213ENST00000565173 G3BP1Q13283 466 aaKnown RBP eCLIP10.59□□□□□ -0.71
CAPN3-213ENST00000565173 FASTKD5Q7L8L6 764 aaKnown RBP10.59□□□□□ -0.71
CAPN3-213ENST00000565173 PARK7Q99497 189 aaKnown RBP10.59□□□□□ -0.71
CAPN3-213ENST00000565173 SLC45A1Q9Y2W3 748 aa10.59□□□□□ -0.71
CAPN3-213ENST00000565173 FAM196BA6NMK8 535 aa10.58□□□□□ -0.72
CAPN3-213ENST00000565173 LDHCP07864 332 aa10.58□□□□□ -0.72
CAPN3-213ENST00000565173 HOXD10P28358 340 aa10.58□□□□□ -0.72
CAPN3-213ENST00000565173 GSTO1P78417 241 aa10.58□□□□□ -0.72
CAPN3-213ENST00000565173 ATP8B2P98198 1209 aa10.58□□□□□ -0.72
CAPN3-213ENST00000565173 RRP1BQ14684 758 aaKnown RBP10.58□□□□□ -0.72
CAPN3-213ENST00000565173 GORABQ5T7V8 394 aa10.58□□□□□ -0.72
CAPN3-213ENST00000565173 CCDC84Q86UT8 332 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-213ENST00000565173 SSH3Q8TE77 659 aa10.58□□□□□ -0.72
CAPN3-213ENST00000565173 GCC1Q96CN9 775 aa10.58□□□□□ -0.72
CAPN3-213ENST00000565173 SHISA4Q96DD7 197 aa10.58□□□□□ -0.72
CAPN3-213ENST00000565173 OSBPL5Q9H0X9 879 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-213ENST00000565173 GPR108Q9NPR9 543 aa10.58□□□□□ -0.72
CAPN3-213ENST00000565173 GABRQQ9UN88 632 aa10.58□□□□□ -0.72
CAPN3-213ENST00000565173 MYPNQ86TC9 1320 aa10.58□□□□□ -0.72
CAPN3-213ENST00000565173 COL2A1P02458 1487 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-213ENST00000565173 PTPRFP10586 1907 aa10.57□□□□□ -0.72
CAPN3-213ENST00000565173 TRIM75PA6NK02 468 aa10.57□□□□□ -0.72
CAPN3-213ENST00000565173 GRK4P32298 578 aa10.57□□□□□ -0.72
CAPN3-213ENST00000565173 PRKCZQ05513 592 aa10.57□□□□□ -0.72
CAPN3-213ENST00000565173 HABP4Q5JVS0 413 aaKnown RBP10.57□□□□□ -0.72
CAPN3-213ENST00000565173 ZKSCAN2Q63HK3 967 aa10.57□□□□□ -0.72
CAPN3-213ENST00000565173 GADL1Q6ZQY3 521 aa10.57□□□□□ -0.72
CAPN3-213ENST00000565173 RAET1EQ8TD07 263 aa10.57□□□□□ -0.72
CAPN3-213ENST00000565173 SH3RF3Q8TEJ3 882 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-213ENST00000565173 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.57□□□□□ -0.72
CAPN3-213ENST00000565173 RAI14Q9P0K7 980 aa10.57□□□□□ -0.72
CAPN3-213ENST00000565173 DOCK1Q14185 1865 aa10.56□□□□□ -0.72
CAPN3-213ENST00000565173 ZBTB7BO15156 539 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-213ENST00000565173 CYP2E1P05181 493 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-213ENST00000565173 UQCRFS1P1P0C7P4 283 aa10.56□□□□□ -0.72
CAPN3-213ENST00000565173 RLBP1P12271 317 aa10.56□□□□□ -0.72
CAPN3-213ENST00000565173 FCGRTP55899 365 aa10.56□□□□□ -0.72
CAPN3-213ENST00000565173 PPP4CP60510 307 aa10.56□□□□□ -0.72
CAPN3-213ENST00000565173 TNNI3KQ59H18 835 aa10.56□□□□□ -0.72
CAPN3-213ENST00000565173 TREML2Q5T2D2 321 aa10.56□□□□□ -0.72
CAPN3-213ENST00000565173 UBE2Q1Q7Z7E8 422 aa10.56□□□□□ -0.72
CAPN3-213ENST00000565173 ADGRA1Q86SQ6 560 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms