RNA–Protein interactions for RNA: ENST00000565034.1

NIP7-206, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 3

Gene NIP7, Length 639 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-206ENST00000565034 CTR9Q6PD62 1173 aa17.25■□□□□ 0.35
NIP7-206ENST00000565034 AMOTL1Q8IY63 956 aa17.25■□□□□ 0.35
NIP7-206ENST00000565034 RTKN2Q8IZC4 609 aa17.25■□□□□ 0.35
NIP7-206ENST00000565034 ESR2Q92731 530 aa17.25■□□□□ 0.35
NIP7-206ENST00000565034 KLF18A0A0U1RQI7 1052 aa17.24■□□□□ 0.35
NIP7-206ENST00000565034 USP17L12C9JPN9 530 aa17.24■□□□□ 0.35
NIP7-206ENST00000565034 USP17L21D6R901 530 aa17.24■□□□□ 0.35
NIP7-206ENST00000565034 ZSCAN22P10073 491 aaPredicted RBP17.24■□□□□ 0.35
NIP7-206ENST00000565034 SYT1P21579 422 aa17.24■□□□□ 0.35
NIP7-206ENST00000565034 LIFRP42702 1097 aa17.24■□□□□ 0.35
NIP7-206ENST00000565034 BTDP43251 543 aa17.24■□□□□ 0.35
NIP7-206ENST00000565034 KIAA2012Q0VF49 1180 aa17.24■□□□□ 0.35
NIP7-206ENST00000565034 TMEM67Q5HYA8 995 aa17.24■□□□□ 0.35
NIP7-206ENST00000565034 SGMS1Q86VZ5 419 aa17.24■□□□□ 0.35
NIP7-206ENST00000565034 TMTC2Q8N394 836 aa17.24■□□□□ 0.35
NIP7-206ENST00000565034 SMARCC2Q8TAQ2 1214 aa17.24■□□□□ 0.35
NIP7-206ENST00000565034 SH3RF3Q8TEJ3 882 aaPredicted RBP17.24■□□□□ 0.35
NIP7-206ENST00000565034 ZSWIM5Q9P217 1185 aa17.24■□□□□ 0.35
NIP7-206ENST00000565034 MKRN1Q9UHC7 482 aaKnown RBP17.24■□□□□ 0.35
NIP7-206ENST00000565034 ROBO3Q96MS0 1386 aa17.24■□□□□ 0.35
NIP7-206ENST00000565034 GOLGA8BA8MQT2 603 aa17.23■□□□□ 0.35
NIP7-206ENST00000565034 ORC4O43929 436 aa17.23■□□□□ 0.35
NIP7-206ENST00000565034 ECE2O60344 883 aa17.23■□□□□ 0.35
NIP7-206ENST00000565034 DPEP1P16444 411 aa17.23■□□□□ 0.35
NIP7-206ENST00000565034 STRIP1Q5VSL9 837 aa17.23■□□□□ 0.35
NIP7-206ENST00000565034 ILDR1Q86SU0 546 aaPredicted RBP17.23■□□□□ 0.35
NIP7-206ENST00000565034 IGDCC4Q8TDY8 1250 aa17.23■□□□□ 0.35
NIP7-206ENST00000565034 FBXW7Q969H0 707 aa17.23■□□□□ 0.35
NIP7-206ENST00000565034 PSMD1Q99460 953 aa17.23■□□□□ 0.35
NIP7-206ENST00000565034 VPS33BQ9H267 617 aa17.23■□□□□ 0.35
NIP7-206ENST00000565034 TOMM22Q9NS69 142 aa17.23■□□□□ 0.35
NIP7-206ENST00000565034 BRPF3Q9ULD4 1205 aa17.23■□□□□ 0.35
NIP7-206ENST00000565034 NAP1L2Q9ULW6 460 aaPredicted RBP17.23■□□□□ 0.35
NIP7-206ENST00000565034 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.23■□□□□ 0.35
NIP7-206ENST00000565034 ATP6V1DQ9Y5K8 247 aa17.23■□□□□ 0.35
NIP7-206ENST00000565034 TACC3Q9Y6A5 838 aa17.23■□□□□ 0.35
NIP7-206ENST00000565034 BRCA1P38398 1863 aaKnown RBP17.22■□□□□ 0.35
NIP7-206ENST00000565034 ERICH2A1L162 156 aa17.22■□□□□ 0.35
NIP7-206ENST00000565034 IFIT3O14879 490 aaKnown RBP17.22■□□□□ 0.35
NIP7-206ENST00000565034 C21orf2O43822 256 aa17.22■□□□□ 0.35
NIP7-206ENST00000565034 ZBTB7AO95365 584 aa17.22■□□□□ 0.35
NIP7-206ENST00000565034 RCAN1P53805 252 aa17.22■□□□□ 0.35
NIP7-206ENST00000565034 RRP12Q5JTH9 1297 aaKnown RBP17.22■□□□□ 0.35
NIP7-206ENST00000565034 LARP1BQ659C4 914 aaKnown RBP17.22■□□□□ 0.35
NIP7-206ENST00000565034 CERS5Q8N5B7 392 aa17.22■□□□□ 0.35
NIP7-206ENST00000565034 NSUN7Q8NE18 718 aaKnown RBP17.22■□□□□ 0.35
NIP7-206ENST00000565034 MRIQ9BWK5 157 aa17.22■□□□□ 0.35
NIP7-206ENST00000565034 LY9Q9HBG7 655 aa17.22■□□□□ 0.35
NIP7-206ENST00000565034 GPHNQ9NQX3 736 aaPredicted RBP17.22■□□□□ 0.35
NIP7-206ENST00000565034 MCM9Q9NXL9 1143 aa17.22■□□□□ 0.35
NIP7-206ENST00000565034 ZNF219Q9P2Y4 722 aaPredicted RBP17.22■□□□□ 0.35
NIP7-206ENST00000565034 DAGLAQ9Y4D2 1042 aa17.22■□□□□ 0.35
NIP7-206ENST00000565034 ECM29Q5VYK3 1845 aa17.21■□□□□ 0.35
NIP7-206ENST00000565034 MYH1P12882 1939 aa17.21■□□□□ 0.35
NIP7-206ENST00000565034 SCN9AQ15858 1988 aa17.21■□□□□ 0.35
NIP7-206ENST00000565034 NID2Q14112 1375 aa17.21■□□□□ 0.35
NIP7-206ENST00000565034 KCNA3P22001 575 aa17.21■□□□□ 0.35
NIP7-206ENST00000565034 HDLBPQ00341 1268 aaKnown RBP17.21■□□□□ 0.35
NIP7-206ENST00000565034 PDE4BQ07343 736 aa17.21■□□□□ 0.35
NIP7-206ENST00000565034 C12orf60Q5U649 245 aa17.21■□□□□ 0.35
NIP7-206ENST00000565034 HHIPL2Q6UWX4 724 aa17.21■□□□□ 0.35
NIP7-206ENST00000565034 TEX11Q8IYF3 940 aa17.21■□□□□ 0.35
NIP7-206ENST00000565034 UBAC1Q9BSL1 405 aa17.21■□□□□ 0.35
NIP7-206ENST00000565034 DBNDD1Q9H9R9 158 aa17.21■□□□□ 0.35
NIP7-206ENST00000565034 TTF2Q9UNY4 1162 aaKnown RBP17.21■□□□□ 0.35
NIP7-206ENST00000565034 PTPDC1A2A3K4 754 aa17.2■□□□□ 0.34
NIP7-206ENST00000565034 USP17L3A6NCW0 530 aa17.2■□□□□ 0.34
NIP7-206ENST00000565034 USP17L4A6NCW7 530 aa17.2■□□□□ 0.34
NIP7-206ENST00000565034 CCDC69A6NI79 296 aa17.2■□□□□ 0.34
NIP7-206ENST00000565034 F13A1P00488 732 aa17.2■□□□□ 0.34
NIP7-206ENST00000565034 RHBDL3P58872 404 aa17.2■□□□□ 0.34
NIP7-206ENST00000565034 CCT2P78371 535 aaKnown RBP17.2■□□□□ 0.34
NIP7-206ENST00000565034 WTAPQ15007 396 aa17.2■□□□□ 0.34
NIP7-206ENST00000565034 AOC3Q16853 763 aa17.2■□□□□ 0.34
NIP7-206ENST00000565034 SKOR2Q2VWA4 1001 aaPredicted RBP17.2■□□□□ 0.34
NIP7-206ENST00000565034 CPLX2Q6PUV4 134 aaKnown RBP17.2■□□□□ 0.34
NIP7-206ENST00000565034 APOA5Q6Q788 366 aa17.2■□□□□ 0.34
NIP7-206ENST00000565034 SYNE3Q6ZMZ3 975 aa17.2■□□□□ 0.34
NIP7-206ENST00000565034 NFXL1Q6ZNB6 911 aa17.2■□□□□ 0.34
NIP7-206ENST00000565034 USP17L1Q7RTZ2 530 aa17.2■□□□□ 0.34
NIP7-206ENST00000565034 FAM184AQ8NB25 1140 aa17.2■□□□□ 0.34
NIP7-206ENST00000565034 UPF1Q92900 1129 aaKnown RBP eCLIP17.2■□□□□ 0.34
NIP7-206ENST00000565034 INCENPQ9NQS7 918 aa17.2■□□□□ 0.34
NIP7-206ENST00000565034 PIM2Q9P1W9 311 aa17.2■□□□□ 0.34
NIP7-206ENST00000565034 HPS5Q9UPZ3 1129 aa17.2■□□□□ 0.34
NIP7-206ENST00000565034 MTMR6Q9Y217 621 aa17.2■□□□□ 0.34
NIP7-206ENST00000565034 CYP2D7A0A087X1C5 515 aa17.19■□□□□ 0.34
NIP7-206ENST00000565034 ZBTB43O43298 467 aa17.19■□□□□ 0.34
NIP7-206ENST00000565034 PPIP5K2O43314 1243 aa17.19■□□□□ 0.34
NIP7-206ENST00000565034 JAK2O60674 1132 aa17.19■□□□□ 0.34
NIP7-206ENST00000565034 CDKL5O76039 1030 aa17.19■□□□□ 0.34
NIP7-206ENST00000565034 CTDNEP1O95476 244 aa17.19■□□□□ 0.34
NIP7-206ENST00000565034 DACT2Q5SW24 774 aa17.19■□□□□ 0.34
NIP7-206ENST00000565034 IQCA1Q86XH1 822 aa17.19■□□□□ 0.34
NIP7-206ENST00000565034 RGS22Q8NE09 1264 aa17.19■□□□□ 0.34
NIP7-206ENST00000565034 NKX2-3Q8TAU0 364 aa17.19■□□□□ 0.34
NIP7-206ENST00000565034 TGFBRAP1Q8WUH2 860 aa17.19■□□□□ 0.34
NIP7-206ENST00000565034 TEKT1Q969V4 418 aa17.19■□□□□ 0.34
NIP7-206ENST00000565034 ZNF287Q9HBT7 754 aa17.19■□□□□ 0.34
NIP7-206ENST00000565034 ATF5Q9Y2D1 282 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 264.4 ms