RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 MYH2Q9UKX2 1941 aa15□□□□□ -0.01
GTF3C1-204ENST00000564664 ZBTB7BO15156 539 aaPredicted RBP14.99□□□□□ -0.01
GTF3C1-204ENST00000564664 CTNND1O60716 968 aaKnown RBP14.99□□□□□ -0.01
GTF3C1-204ENST00000564664 BTDP43251 543 aa14.99□□□□□ -0.01
GTF3C1-204ENST00000564664 PRMT2P55345 433 aa14.99□□□□□ -0.01
GTF3C1-204ENST00000564664 CCDC158Q5M9N0 1113 aa14.99□□□□□ -0.01
GTF3C1-204ENST00000564664 ZSCAN29Q8IWY8 852 aaPredicted RBP14.99□□□□□ -0.01
GTF3C1-204ENST00000564664 PICK1Q9NRD5 415 aa14.99□□□□□ -0.01
GTF3C1-204ENST00000564664 TNNQ9UQP3 1299 aa14.99□□□□□ -0.01
GTF3C1-204ENST00000564664 NOP58Q9Y2X3 529 aaKnown RBP14.99□□□□□ -0.01
GTF3C1-204ENST00000564664 RHBDL3P58872 404 aa14.98□□□□□ -0.01
GTF3C1-204ENST00000564664 FASTKD5Q7L8L6 764 aaKnown RBP14.98□□□□□ -0.01
GTF3C1-204ENST00000564664 SCYL3Q8IZE3 742 aa14.98□□□□□ -0.01
GTF3C1-204ENST00000564664 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.98□□□□□ -0.01
GTF3C1-204ENST00000564664 NSUN4Q96CB9 384 aaKnown RBP14.98□□□□□ -0.01
GTF3C1-204ENST00000564664 ZNF512BQ96KM6 892 aaPredicted RBP14.98□□□□□ -0.01
GTF3C1-204ENST00000564664 SURF6O75683 361 aaKnown RBP14.97□□□□□ -0.01
GTF3C1-204ENST00000564664 MS4A1P11836 297 aa14.97□□□□□ -0.01
GTF3C1-204ENST00000564664 LACTBP83111 547 aaPredicted RBP14.97□□□□□ -0.01
GTF3C1-204ENST00000564664 OS9Q13438 667 aaPredicted RBP14.97□□□□□ -0.01
GTF3C1-204ENST00000564664 TNNI3KQ59H18 835 aa14.97□□□□□ -0.01
GTF3C1-204ENST00000564664 C17orf99Q6UX52 265 aa14.97□□□□□ -0.01
GTF3C1-204ENST00000564664 RAI14Q9P0K7 980 aa14.97□□□□□ -0.01
GTF3C1-204ENST00000564664 LRP2BPQ9P2M1 347 aa14.97□□□□□ -0.01
GTF3C1-204ENST00000564664 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.97□□□□□ -0.01
GTF3C1-204ENST00000564664 FPGT-TNNI3KV9GXZ4 949 aa14.97□□□□□ -0.01
GTF3C1-204ENST00000564664 RFX7Q2KHR2 1363 aa14.97□□□□□ -0.01
GTF3C1-204ENST00000564664 ATRNL1Q5VV63 1379 aa14.97□□□□□ -0.01
GTF3C1-204ENST00000564664 ZBED9Q6R2W3 1325 aa14.96□□□□□ -0.01
GTF3C1-204ENST00000564664 DDTLA6NHG4 134 aaPredicted RBP14.96□□□□□ -0.01
GTF3C1-204ENST00000564664 PDHXO00330 501 aa14.96□□□□□ -0.01
GTF3C1-204ENST00000564664 BAG3O95817 575 aa14.96□□□□□ -0.01
GTF3C1-204ENST00000564664 PLCG2P16885 1265 aa14.96□□□□□ -0.01
GTF3C1-204ENST00000564664 PTPRAP18433 802 aa14.96□□□□□ -0.01
GTF3C1-204ENST00000564664 HOXD10P28358 340 aa14.96□□□□□ -0.01
GTF3C1-204ENST00000564664 MCAMP43121 646 aa14.96□□□□□ -0.01
GTF3C1-204ENST00000564664 SH3BP5LQ7L8J4 393 aa14.96□□□□□ -0.01
GTF3C1-204ENST00000564664 ITPRIPQ8IWB1 547 aa14.96□□□□□ -0.01
GTF3C1-204ENST00000564664 ZNF384Q8TF68 577 aa14.96□□□□□ -0.01
GTF3C1-204ENST00000564664 NOL10Q9BSC4 688 aaKnown RBP14.96□□□□□ -0.01
GTF3C1-204ENST00000564664 TMEM106CQ9BVX2 250 aa14.96□□□□□ -0.01
GTF3C1-204ENST00000564664 DDX4Q9NQI0 724 aaKnown RBP14.96□□□□□ -0.01
GTF3C1-204ENST00000564664 SLC45A1Q9Y2W3 748 aa14.96□□□□□ -0.01
GTF3C1-204ENST00000564664 AFG3L2Q9Y4W6 797 aa14.96□□□□□ -0.01
GTF3C1-204ENST00000564664 ZHX2Q9Y6X8 837 aa14.96□□□□□ -0.01
GTF3C1-204ENST00000564664 MOGSQ13724 837 aa14.95□□□□□ -0.02
GTF3C1-204ENST00000564664 TTC39AQ5SRH9 613 aa14.95□□□□□ -0.02
GTF3C1-204ENST00000564664 TMED8Q6PL24 325 aaPredicted RBP14.95□□□□□ -0.02
GTF3C1-204ENST00000564664 TBC1D9Q6ZT07 1266 aa14.95□□□□□ -0.02
GTF3C1-204ENST00000564664 PARK7Q99497 189 aaKnown RBP14.95□□□□□ -0.02
GTF3C1-204ENST00000564664 TBC1D2Q9BYX2 928 aa14.95□□□□□ -0.02
GTF3C1-204ENST00000564664 TNRC18O15417 2968 aaPredicted RBP14.94□□□□□ -0.02
GTF3C1-204ENST00000564664 A0A0G2JLL6 359 aaPredicted RBP14.94□□□□□ -0.02
GTF3C1-204ENST00000564664 PPP4CP60510 307 aa14.94□□□□□ -0.02
GTF3C1-204ENST00000564664 PICALMQ13492 652 aa14.94□□□□□ -0.02
GTF3C1-204ENST00000564664 SLC9C1Q4G0N8 1177 aa14.94□□□□□ -0.02
GTF3C1-204ENST00000564664 PRRT2Q7Z6L0 340 aaPredicted RBP14.94□□□□□ -0.02
GTF3C1-204ENST00000564664 OSBPL5Q9H0X9 879 aaPredicted RBP14.94□□□□□ -0.02
GTF3C1-204ENST00000564664 DHX36Q9H2U1 1008 aaKnown RBP14.94□□□□□ -0.02
GTF3C1-204ENST00000564664 COL2A1P02458 1487 aaPredicted RBP14.94□□□□□ -0.02
GTF3C1-204ENST00000564664 KIAA0100Q14667 2235 aaKnown RBP14.93□□□□□ -0.02
GTF3C1-204ENST00000564664 CAP1Q01518 475 aa14.93□□□□□ -0.02
GTF3C1-204ENST00000564664 HSP90AB4PQ58FF6 505 aa14.93□□□□□ -0.02
GTF3C1-204ENST00000564664 PRPF38BQ5VTL8 546 aaKnown RBP14.93□□□□□ -0.02
GTF3C1-204ENST00000564664 NAA16Q6N069 864 aaPredicted RBP14.93□□□□□ -0.02
GTF3C1-204ENST00000564664 GPAT2Q6NUI2 795 aa14.93□□□□□ -0.02
GTF3C1-204ENST00000564664 PI16Q6UXB8 463 aa14.93□□□□□ -0.02
GTF3C1-204ENST00000564664 ERC1Q8IUD2 1116 aa14.93□□□□□ -0.02
GTF3C1-204ENST00000564664 ZNF333Q96JL9 665 aa14.93□□□□□ -0.02
GTF3C1-204ENST00000564664 DBNDD2Q9BQY9 259 aa14.93□□□□□ -0.02
GTF3C1-204ENST00000564664 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.93□□□□□ -0.02
GTF3C1-204ENST00000564664 PI4KBQ9UBF8 816 aa14.93□□□□□ -0.02
GTF3C1-204ENST00000564664 HERC5Q9UII4 1024 aaKnown RBP14.93□□□□□ -0.02
GTF3C1-204ENST00000564664 RLBP1P12271 317 aa14.92□□□□□ -0.02
GTF3C1-204ENST00000564664 PSMC4P43686 418 aa14.92□□□□□ -0.02
GTF3C1-204ENST00000564664 CERS3Q8IU89 383 aa14.92□□□□□ -0.02
GTF3C1-204ENST00000564664 TEX11Q8IYF3 940 aa14.92□□□□□ -0.02
GTF3C1-204ENST00000564664 CHMP4BQ9H444 224 aaKnown RBP14.92□□□□□ -0.02
GTF3C1-204ENST00000564664 CPA4Q9UI42 421 aa14.92□□□□□ -0.02
GTF3C1-204ENST00000564664 PTCH2Q9Y6C5 1203 aa14.92□□□□□ -0.02
GTF3C1-204ENST00000564664 ADGRA2Q96PE1 1338 aa14.92□□□□□ -0.02
GTF3C1-204ENST00000564664 FOXP4Q8IVH2 680 aaPredicted RBP14.91□□□□□ -0.02
GTF3C1-204ENST00000564664 GINM1Q9NU53 330 aa14.91□□□□□ -0.02
GTF3C1-204ENST00000564664 SRRDQ9UH36 339 aa14.91□□□□□ -0.02
GTF3C1-204ENST00000564664 HTTP42858 3142 aa14.9□□□□□ -0.02
GTF3C1-204ENST00000564664 POTEFA5A3E0 1075 aa14.9□□□□□ -0.02
GTF3C1-204ENST00000564664 FMNL1O95466 1100 aaPredicted RBP14.9□□□□□ -0.02
GTF3C1-204ENST00000564664 CYP2E1P05181 493 aaPredicted RBP14.9□□□□□ -0.02
GTF3C1-204ENST00000564664 BCRP11274 1271 aa14.9□□□□□ -0.02
GTF3C1-204ENST00000564664 CAP2P40123 477 aa14.9□□□□□ -0.02
GTF3C1-204ENST00000564664 CEP85Q6P2H3 762 aa14.9□□□□□ -0.02
GTF3C1-204ENST00000564664 PROCA1Q8NCQ7 364 aaPredicted RBP14.9□□□□□ -0.02
GTF3C1-204ENST00000564664 ARHGAP39Q9C0H5 1083 aa14.9□□□□□ -0.02
GTF3C1-204ENST00000564664 C1orf115Q9H7X2 142 aa14.9□□□□□ -0.02
GTF3C1-204ENST00000564664 SNRKQ9NRH2 765 aa14.9□□□□□ -0.02
GTF3C1-204ENST00000564664 DOCK2Q92608 1830 aa14.89□□□□□ -0.03
GTF3C1-204ENST00000564664 FCGRTP55899 365 aa14.89□□□□□ -0.03
GTF3C1-204ENST00000564664 GADL1Q6ZQY3 521 aa14.89□□□□□ -0.03
GTF3C1-204ENST00000564664 METTL16Q86W50 562 aaKnown RBP14.89□□□□□ -0.03
GTF3C1-204ENST00000564664 RPAP2Q8IXW5 612 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms