RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 FOXK1P85037 733 aa8.78□□□□□ -1
ATXN3-249ENST00000564606 CEBPZQ03701 1054 aaKnown RBP8.78□□□□□ -1
ATXN3-249ENST00000564606 PPP4R3BQ5MIZ7 849 aa8.78□□□□□ -1
ATXN3-249ENST00000564606 SLC9C2Q5TAH2 1124 aa8.78□□□□□ -1
ATXN3-249ENST00000564606 NBPF14Q5TI25 921 aa8.78□□□□□ -1
ATXN3-249ENST00000564606 JAKMIP3Q5VZ66 844 aa8.78□□□□□ -1
ATXN3-249ENST00000564606 NBPF10Q6P3W6 841 aaKnown RBP8.78□□□□□ -1
ATXN3-249ENST00000564606 FAM173BQ6P4H8 233 aa8.78□□□□□ -1
ATXN3-249ENST00000564606 STOX1Q6ZVD7 989 aa8.78□□□□□ -1
ATXN3-249ENST00000564606 FAM177A1Q8N128 213 aaPredicted RBP8.78□□□□□ -1
ATXN3-249ENST00000564606 NBPF15Q8N660 670 aa8.78□□□□□ -1
ATXN3-249ENST00000564606 AOPEPQ8N6M6 819 aa8.78□□□□□ -1
ATXN3-249ENST00000564606 KRI1Q8N9T8 703 aaKnown RBP8.78□□□□□ -1
ATXN3-249ENST00000564606 OSBP2Q969R2 916 aa8.78□□□□□ -1
ATXN3-249ENST00000564606 EDC3Q96F86 508 aaKnown RBP8.78□□□□□ -1
ATXN3-249ENST00000564606 C16orf45Q96MC5 204 aaPredicted RBP8.78□□□□□ -1
ATXN3-249ENST00000564606 SEC62Q99442 399 aaKnown RBP8.78□□□□□ -1
ATXN3-249ENST00000564606 NAA15Q9BXJ9 866 aaKnown RBP8.78□□□□□ -1
ATXN3-249ENST00000564606 NAPBQ9H115 298 aa8.78□□□□□ -1
ATXN3-249ENST00000564606 FOXP1Q9H334 677 aaPredicted RBP8.78□□□□□ -1
ATXN3-249ENST00000564606 ZBTB3Q9H5J0 574 aa8.78□□□□□ -1
ATXN3-249ENST00000564606 PYCARDQ9ULZ3 195 aa8.78□□□□□ -1
ATXN3-249ENST00000564606 COL18A1P39060 1754 aa8.78□□□□□ -1
ATXN3-249ENST00000564606 DPYSL4O14531 572 aa8.77□□□□□ -1.01
ATXN3-249ENST00000564606 PDE8BO95263 885 aa8.77□□□□□ -1.01
ATXN3-249ENST00000564606 DEXIO95424 95 aa8.77□□□□□ -1.01
ATXN3-249ENST00000564606 CTDNEP1O95476 244 aa8.77□□□□□ -1.01
ATXN3-249ENST00000564606 U2AF2P26368 475 aaKnown RBP eCLIP8.77□□□□□ -1.01
ATXN3-249ENST00000564606 ARID4AP29374 1257 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-249ENST00000564606 IGHMBP2P38935 993 aaKnown RBP8.77□□□□□ -1.01
ATXN3-249ENST00000564606 IL6STP40189 918 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-249ENST00000564606 KIF23Q02241 960 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-249ENST00000564606 BMS1Q14692 1282 aaKnown RBP8.77□□□□□ -1.01
ATXN3-249ENST00000564606 FILIP1LQ4L180 1135 aa8.77□□□□□ -1.01
ATXN3-249ENST00000564606 CCDC178Q5BJE1 867 aa8.77□□□□□ -1.01
ATXN3-249ENST00000564606 TEX35Q5T0J7 233 aa8.77□□□□□ -1.01
ATXN3-249ENST00000564606 MFSD6Q6ZSS7 791 aa8.77□□□□□ -1.01
ATXN3-249ENST00000564606 TTLL7Q6ZT98 887 aa8.77□□□□□ -1.01
ATXN3-249ENST00000564606 HOMER1Q86YM7 354 aa8.77□□□□□ -1.01
ATXN3-249ENST00000564606 CCAR2Q8N163 923 aaKnown RBP8.77□□□□□ -1.01
ATXN3-249ENST00000564606 CNNM3Q8NE01 707 aa8.77□□□□□ -1.01
ATXN3-249ENST00000564606 CACTINQ8WUQ7 758 aaKnown RBP8.77□□□□□ -1.01
ATXN3-249ENST00000564606 MPHOSPH8Q99549 860 aa8.77□□□□□ -1.01
ATXN3-249ENST00000564606 RBM28Q9NW13 759 aaKnown RBP8.77□□□□□ -1.01
ATXN3-249ENST00000564606 TUBE1Q9UJT0 475 aa8.77□□□□□ -1.01
ATXN3-249ENST00000564606 PHLPP2Q6ZVD8 1323 aa8.77□□□□□ -1.01
ATXN3-249ENST00000564606 NID2Q14112 1375 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 CCDC66A2RUB6 948 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 POTEB2H3BUK9 544 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 M0R2C6 588 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 SH2B2O14492 632 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-249ENST00000564606 IRS4O14654 1257 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-249ENST00000564606 IFIT3O14879 490 aaKnown RBP8.76□□□□□ -1.01
ATXN3-249ENST00000564606 ARHGAP6O43182 974 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 TOP1P11387 765 aaKnown RBP8.76□□□□□ -1.01
ATXN3-249ENST00000564606 PLCG2P16885 1265 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 IFNAR1P17181 557 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 CDK11BP21127 795 aaKnown RBP8.76□□□□□ -1.01
ATXN3-249ENST00000564606 ITGA6P23229 1130 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 ERCC5P28715 1186 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-249ENST00000564606 HOXA7P31268 230 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-249ENST00000564606 ZAP70P43403 619 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 UBASH3AP57075 661 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 GPS2Q13227 327 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 LRRC24Q50LG9 513 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 TMEM67Q5HYA8 995 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 NYAP1Q6ZVC0 841 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 NUTM2AQ8IVF1 878 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-249ENST00000564606 DHX40Q8IX18 779 aaKnown RBP8.76□□□□□ -1.01
ATXN3-249ENST00000564606 PLPP6Q8IY26 295 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 KRT222Q8N1A0 295 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 MNS1Q8NEH6 495 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 ZC3H15Q8WU90 426 aaKnown RBP8.76□□□□□ -1.01
ATXN3-249ENST00000564606 SMARCE1Q969G3 411 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 RBM33Q96EV2 1170 aaKnown RBP8.76□□□□□ -1.01
ATXN3-249ENST00000564606 LRRC2Q9BYS8 371 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 ZMYND15Q9H091 742 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 TRMT112Q9UI30 125 aaKnown RBP8.76□□□□□ -1.01
ATXN3-249ENST00000564606 ZNF652Q9Y2D9 606 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 RIPOR2Q9Y4F9 1068 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 SOS2Q07890 1332 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-249ENST00000564606 PNPLA7Q6ZV29 1317 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 UBR2Q8IWV8 1755 aa8.76□□□□□ -1.01
ATXN3-249ENST00000564606 KCPQ6ZWJ8 1503 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 IDH1O75874 414 aaKnown RBP8.75□□□□□ -1.01
ATXN3-249ENST00000564606 FMNL1O95466 1100 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-249ENST00000564606 A1BGP04217 495 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 PFKFB1P16118 471 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 NDUFA8P51970 172 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 FANCCQ00597 558 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 SPAG1Q07617 926 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 TRIM14Q14142 442 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 WTAPQ15007 396 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 CHRNA2Q15822 529 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 CFAP100Q494V2 611 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 CCDC152Q4G0S7 254 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 AKNAD1Q5T1N1 836 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 RESP18Q5W5W9 173 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 KRT40Q6A162 431 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 APOA5Q6Q788 366 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms