RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 PPP1R18Q6NYC8 613 aa9.63□□□□□ -0.87
TCF4-221ENST00000563888 USP17L2Q6R6M4 530 aa9.63□□□□□ -0.87
TCF4-221ENST00000563888 DDX46Q7L014 1031 aaKnown RBP9.63□□□□□ -0.87
TCF4-221ENST00000563888 USP17L1Q7RTZ2 530 aa9.63□□□□□ -0.87
TCF4-221ENST00000563888 DEFB123Q8N688 67 aa9.63□□□□□ -0.87
TCF4-221ENST00000563888 GAS2L2Q8NHY3 880 aa9.63□□□□□ -0.87
TCF4-221ENST00000563888 RTL9Q8NET4 1388 aa9.63□□□□□ -0.87
TCF4-221ENST00000563888 MAP3K15Q6ZN16 1313 aa9.62□□□□□ -0.87
TCF4-221ENST00000563888 LZTS3O60299 673 aaPredicted RBP9.62□□□□□ -0.87
TCF4-221ENST00000563888 CD2BP2O95400 341 aaKnown RBP9.62□□□□□ -0.87
TCF4-221ENST00000563888 HCLS1P14317 486 aaPredicted RBP9.62□□□□□ -0.87
TCF4-221ENST00000563888 MYL6BP14649 208 aa9.62□□□□□ -0.87
TCF4-221ENST00000563888 NF2P35240 595 aa9.62□□□□□ -0.87
TCF4-221ENST00000563888 CAP1Q01518 475 aa9.62□□□□□ -0.87
TCF4-221ENST00000563888 TRIM32Q13049 653 aa9.62□□□□□ -0.87
TCF4-221ENST00000563888 MAP7D1Q3KQU3 841 aa9.62□□□□□ -0.87
TCF4-221ENST00000563888 SPRYD7Q5W111 196 aa9.62□□□□□ -0.87
TCF4-221ENST00000563888 Q7L0L9 218 aa9.62□□□□□ -0.87
TCF4-221ENST00000563888 PPP1R42Q7Z4L9 355 aa9.62□□□□□ -0.87
TCF4-221ENST00000563888 DEPDC4Q8N2C3 294 aa9.62□□□□□ -0.87
TCF4-221ENST00000563888 IGF2BP3O00425 579 aaKnown RBP eCLIP9.61□□□□□ -0.87
TCF4-221ENST00000563888 U2SURPO15042 1029 aaKnown RBP9.61□□□□□ -0.87
TCF4-221ENST00000563888 DIAPH1O60610 1272 aaKnown RBP9.61□□□□□ -0.87
TCF4-221ENST00000563888 VIL1P09327 827 aaKnown RBP9.61□□□□□ -0.87
TCF4-221ENST00000563888 SP3Q02447 781 aa9.61□□□□□ -0.87
TCF4-221ENST00000563888 NBPF20Q3BBV1 942 aa9.61□□□□□ -0.87
TCF4-221ENST00000563888 PLEKHM2Q8IWE5 1019 aa9.61□□□□□ -0.87
TCF4-221ENST00000563888 ZNF34Q8IZ26 560 aa9.61□□□□□ -0.87
TCF4-221ENST00000563888 PLPP7Q8NBV4 271 aa9.61□□□□□ -0.87
TCF4-221ENST00000563888 FAM174AQ8TBP5 190 aa9.61□□□□□ -0.87
TCF4-221ENST00000563888 SH3TC2Q8TF17 1288 aa9.61□□□□□ -0.87
TCF4-221ENST00000563888 UTP14AQ9BVJ6 771 aaKnown RBP9.61□□□□□ -0.87
TCF4-221ENST00000563888 PRO3102Q9H379 93 aa9.61□□□□□ -0.87
TCF4-221ENST00000563888 CDV3Q9UKY7 258 aaKnown RBP9.61□□□□□ -0.87
TCF4-221ENST00000563888 PTCH2Q9Y6C5 1203 aa9.61□□□□□ -0.87
TCF4-221ENST00000563888 POLR2AP24928 1970 aaKnown RBP9.61□□□□□ -0.87
TCF4-221ENST00000563888 MANSC4A6NHS7 340 aaPredicted RBP9.6□□□□□ -0.87
TCF4-221ENST00000563888 ATG7O95352 703 aa9.6□□□□□ -0.87
TCF4-221ENST00000563888 INHBEP58166 350 aa9.6□□□□□ -0.87
TCF4-221ENST00000563888 ZNF280AP59817 542 aaPredicted RBP9.6□□□□□ -0.87
TCF4-221ENST00000563888 TRIM26Q12899 539 aaPredicted RBP9.6□□□□□ -0.87
TCF4-221ENST00000563888 CRHR2Q13324 411 aa9.6□□□□□ -0.87
TCF4-221ENST00000563888 GRAPQ13588 217 aa9.6□□□□□ -0.87
TCF4-221ENST00000563888 EML3Q32P44 896 aa9.6□□□□□ -0.87
TCF4-221ENST00000563888 SLC10A5Q5PT55 438 aa9.6□□□□□ -0.87
TCF4-221ENST00000563888 ARMC9Q7Z3E5 817 aa9.6□□□□□ -0.87
TCF4-221ENST00000563888 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.6□□□□□ -0.87
TCF4-221ENST00000563888 PHTF2Q8N3S3 785 aa9.6□□□□□ -0.87
TCF4-221ENST00000563888 KCTD17Q8N5Z5 321 aa9.6□□□□□ -0.87
TCF4-221ENST00000563888 GRAPLQ8TC17 118 aaPredicted RBP9.6□□□□□ -0.87
TCF4-221ENST00000563888 ZNF428Q96B54 188 aa9.6□□□□□ -0.87
TCF4-221ENST00000563888 IRX2Q9BZI1 471 aaPredicted RBP9.6□□□□□ -0.87
TCF4-221ENST00000563888 MYOZ2Q9NPC6 264 aa9.6□□□□□ -0.87
TCF4-221ENST00000563888 PRDM6Q9NQX0 595 aa9.6□□□□□ -0.87
TCF4-221ENST00000563888 STAP2Q9UGK3 403 aa9.6□□□□□ -0.87
TCF4-221ENST00000563888 POLLQ9UGP5 575 aa9.6□□□□□ -0.87
TCF4-221ENST00000563888 ANGEL1Q9UNK9 670 aaKnown RBP9.6□□□□□ -0.87
TCF4-221ENST00000563888 FZD1Q9UP38 647 aa9.6□□□□□ -0.87
TCF4-221ENST00000563888 NR2E3Q9Y5X4 410 aa9.6□□□□□ -0.87
TCF4-221ENST00000563888 VARSP26640 1264 aaKnown RBP9.59□□□□□ -0.87
TCF4-221ENST00000563888 RPIAP49247 311 aa9.59□□□□□ -0.87
TCF4-221ENST00000563888 WNT7BP56706 349 aa9.59□□□□□ -0.87
TCF4-221ENST00000563888 GPSM2P81274 684 aa9.59□□□□□ -0.87
TCF4-221ENST00000563888 NCOA4Q13772 614 aa9.59□□□□□ -0.87
TCF4-221ENST00000563888 NBPF9Q3BBW0 867 aa9.59□□□□□ -0.87
TCF4-221ENST00000563888 C4orf48Q5BLP8 95 aa9.59□□□□□ -0.87
TCF4-221ENST00000563888 MCM10Q7L590 875 aa9.59□□□□□ -0.87
TCF4-221ENST00000563888 ZC3H12CQ9C0D7 883 aaKnown RBP9.59□□□□□ -0.87
TCF4-221ENST00000563888 MIS18AQ9NYP9 233 aa9.59□□□□□ -0.87
TCF4-221ENST00000563888 DOLKQ9UPQ8 538 aa9.59□□□□□ -0.87
TCF4-221ENST00000563888 USTQ9Y2C2 406 aa9.59□□□□□ -0.87
TCF4-221ENST00000563888 STXBP5LQ9Y2K9 1186 aa9.59□□□□□ -0.87
TCF4-221ENST00000563888 ZBTB7BO15156 539 aaPredicted RBP9.58□□□□□ -0.88
TCF4-221ENST00000563888 PARP10Q53GL7 1025 aa9.58□□□□□ -0.88
TCF4-221ENST00000563888 OTUD7BQ6GQQ9 843 aa9.58□□□□□ -0.88
TCF4-221ENST00000563888 EYA3Q99504 573 aa9.58□□□□□ -0.88
TCF4-221ENST00000563888 HTATIP2Q9BUP3 242 aa9.58□□□□□ -0.88
TCF4-221ENST00000563888 IBTKQ9P2D0 1353 aaPredicted RBP9.58□□□□□ -0.88
TCF4-221ENST00000563888 ZNF609O15014 1411 aa9.57□□□□□ -0.88
TCF4-221ENST00000563888 LAMA2P24043 3122 aaKnown RBP9.57□□□□□ -0.88
TCF4-221ENST00000563888 ATP5J2-PTCD1G3V325 749 aa9.57□□□□□ -0.88
TCF4-221ENST00000563888 RASA1P20936 1047 aa9.57□□□□□ -0.88
TCF4-221ENST00000563888 ARHGEF6Q15052 776 aa9.57□□□□□ -0.88
TCF4-221ENST00000563888 PLA2G2CQ5R387 149 aa9.57□□□□□ -0.88
TCF4-221ENST00000563888 LDLRAD1Q5T700 205 aa9.57□□□□□ -0.88
TCF4-221ENST00000563888 TRIM50Q86XT4 487 aa9.57□□□□□ -0.88
TCF4-221ENST00000563888 EHBP1Q8NDI1 1231 aa9.57□□□□□ -0.88
TCF4-221ENST00000563888 TBC1D16Q8TBP0 767 aa9.57□□□□□ -0.88
TCF4-221ENST00000563888 PHACTR3Q96KR7 559 aa9.57□□□□□ -0.88
TCF4-221ENST00000563888 PODXL2Q9NZ53 605 aa9.57□□□□□ -0.88
TCF4-221ENST00000563888 NOD1Q9Y239 953 aa9.57□□□□□ -0.88
TCF4-221ENST00000563888 CEMIPQ8WUJ3 1361 aa9.57□□□□□ -0.88
TCF4-221ENST00000563888 A0A1W2PPC1 479 aa9.56□□□□□ -0.88
TCF4-221ENST00000563888 DCTN1Q14203 1278 aa9.56□□□□□ -0.88
TCF4-221ENST00000563888 ARID5BQ14865 1188 aa9.56□□□□□ -0.88
TCF4-221ENST00000563888 OXLD1Q5BKU9 147 aa9.56□□□□□ -0.88
TCF4-221ENST00000563888 VASH1Q7L8A9 365 aaPredicted RBP9.56□□□□□ -0.88
TCF4-221ENST00000563888 TMC4Q7Z404 712 aa9.56□□□□□ -0.88
TCF4-221ENST00000563888 TRMT44Q8IYL2 757 aaKnown RBP9.56□□□□□ -0.88
TCF4-221ENST00000563888 AGBL3Q8NEM8 1001 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms