RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 PAG1Q9NWQ8 432 aa24.65■■□□□ 1.54
CMTM3-206ENST00000563672 ATRNL1Q5VV63 1379 aa24.65■■□□□ 1.54
CMTM3-206ENST00000563672 MYO5AQ9Y4I1 1855 aaKnown RBP24.64■■□□□ 1.54
CMTM3-206ENST00000563672 DDTLA6NHG4 134 aaPredicted RBP24.64■■□□□ 1.54
CMTM3-206ENST00000563672 BEGAINQ9BUH8 593 aa24.64■■□□□ 1.54
CMTM3-206ENST00000563672 ZNF341Q9BYN7 854 aa24.64■■□□□ 1.54
CMTM3-206ENST00000563672 MAP3K10Q02779 954 aa24.63■■□□□ 1.53
CMTM3-206ENST00000563672 VGLL4Q14135 290 aa24.63■■□□□ 1.53
CMTM3-206ENST00000563672 SLC9C2Q5TAH2 1124 aa24.63■■□□□ 1.53
CMTM3-206ENST00000563672 GPATCH3Q96I76 525 aa24.63■■□□□ 1.53
CMTM3-206ENST00000563672 WNK4Q96J92 1243 aa24.63■■□□□ 1.53
CMTM3-206ENST00000563672 RWDD1Q9H446 243 aaPredicted RBP24.63■■□□□ 1.53
CMTM3-206ENST00000563672 ZNF112Q9UJU3 913 aa24.63■■□□□ 1.53
CMTM3-206ENST00000563672 ZBTB48P10074 688 aaPredicted RBP24.62■■□□□ 1.53
CMTM3-206ENST00000563672 PDE6AP16499 860 aa24.62■■□□□ 1.53
CMTM3-206ENST00000563672 CTCFP49711 727 aaPredicted RBP24.62■■□□□ 1.53
CMTM3-206ENST00000563672 DYNLL1P63167 89 aaKnown RBP24.62■■□□□ 1.53
CMTM3-206ENST00000563672 ANKRD45Q5TZF3 282 aa24.62■■□□□ 1.53
CMTM3-206ENST00000563672 ZSCAN29Q8IWY8 852 aaPredicted RBP24.62■■□□□ 1.53
CMTM3-206ENST00000563672 WRNIP1Q96S55 665 aa24.62■■□□□ 1.53
CMTM3-206ENST00000563672 OSBPL5Q9H0X9 879 aaPredicted RBP24.62■■□□□ 1.53
CMTM3-206ENST00000563672 DOCK2Q92608 1830 aa24.61■■□□□ 1.53
CMTM3-206ENST00000563672 CA12O43570 354 aa24.61■■□□□ 1.53
CMTM3-206ENST00000563672 IGHDP01880 384 aa24.61■■□□□ 1.53
CMTM3-206ENST00000563672 MKRN3Q13064 507 aaKnown RBP24.61■■□□□ 1.53
CMTM3-206ENST00000563672 CERS3Q8IU89 383 aa24.61■■□□□ 1.53
CMTM3-206ENST00000563672 SMC5Q8IY18 1101 aa24.61■■□□□ 1.53
CMTM3-206ENST00000563672 MIGA1Q8NAN2 632 aa24.61■■□□□ 1.53
CMTM3-206ENST00000563672 OTUD7AQ8TE49 926 aaPredicted RBP24.61■■□□□ 1.53
CMTM3-206ENST00000563672 ELP3Q9H9T3 547 aa24.61■■□□□ 1.53
CMTM3-206ENST00000563672 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.61■■□□□ 1.53
CMTM3-206ENST00000563672 CSADQ9Y600 493 aa24.61■■□□□ 1.53
CMTM3-206ENST00000563672 COL2A1P02458 1487 aaPredicted RBP24.61■■□□□ 1.53
CMTM3-206ENST00000563672 TCRBV5S4A2TA0A5A2 114 aa24.6■■□□□ 1.53
CMTM3-206ENST00000563672 GJA5P36382 358 aa24.6■■□□□ 1.53
CMTM3-206ENST00000563672 TM4SF4P48230 202 aa24.6■■□□□ 1.53
CMTM3-206ENST00000563672 TSHZ3Q63HK5 1081 aa24.6■■□□□ 1.53
CMTM3-206ENST00000563672 ZKSCAN4Q969J2 545 aaPredicted RBP24.6■■□□□ 1.53
CMTM3-206ENST00000563672 TTC41PQ6P2S7 1318 aa24.6■■□□□ 1.53
CMTM3-206ENST00000563672 HSPA8P11142 646 aaKnown RBP24.59■■□□□ 1.53
CMTM3-206ENST00000563672 IRX6P78412 446 aaPredicted RBP24.59■■□□□ 1.53
CMTM3-206ENST00000563672 TGFBRAP1Q8WUH2 860 aa24.59■■□□□ 1.53
CMTM3-206ENST00000563672 RIOK1Q9BRS2 568 aaKnown RBP24.59■■□□□ 1.53
CMTM3-206ENST00000563672 SNCAIPQ9Y6H5 919 aa24.59■■□□□ 1.53
CMTM3-206ENST00000563672 SALL3Q9BXA9 1300 aa24.59■■□□□ 1.53
CMTM3-206ENST00000563672 ZNF532Q9HCE3 1301 aa24.59■■□□□ 1.53
CMTM3-206ENST00000563672 INPP5BP32019 993 aa24.58■■□□□ 1.53
CMTM3-206ENST00000563672 ADD2P35612 726 aa24.58■■□□□ 1.53
CMTM3-206ENST00000563672 OPTNQ96CV9 577 aa24.58■■□□□ 1.53
CMTM3-206ENST00000563672 RNF186Q9NXI6 227 aa24.58■■□□□ 1.53
CMTM3-206ENST00000563672 OTOFQ9HC10 1997 aa24.57■■□□□ 1.52
CMTM3-206ENST00000563672 SPDYE5A6NIY4 337 aa24.57■■□□□ 1.52
CMTM3-206ENST00000563672 PHF20L1A8MW92 1017 aa24.57■■□□□ 1.52
CMTM3-206ENST00000563672 TBC1D12O60347 775 aa24.57■■□□□ 1.52
CMTM3-206ENST00000563672 SREBF2Q12772 1141 aa24.57■■□□□ 1.52
CMTM3-206ENST00000563672 MAPKAPK5Q8IW41 473 aa24.57■■□□□ 1.52
CMTM3-206ENST00000563672 PI4K2BQ8TCG2 481 aa24.57■■□□□ 1.52
CMTM3-206ENST00000563672 CNKSR2Q8WXI2 1034 aa24.57■■□□□ 1.52
CMTM3-206ENST00000563672 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.57■■□□□ 1.52
CMTM3-206ENST00000563672 SAGE1Q9NXZ1 904 aa24.57■■□□□ 1.52
CMTM3-206ENST00000563672 ZBTB47Q9UFB7 747 aaPredicted RBP24.57■■□□□ 1.52
CMTM3-206ENST00000563672 FLT1P17948 1338 aa24.57■■□□□ 1.52
CMTM3-206ENST00000563672 MAGEB6P1A0A0J9YX57 407 aa24.56■■□□□ 1.52
CMTM3-206ENST00000563672 MANSC4A6NHS7 340 aaPredicted RBP24.56■■□□□ 1.52
CMTM3-206ENST00000563672 SLURP2P0DP57 97 aa24.56■■□□□ 1.52
CMTM3-206ENST00000563672 MX1P20591 662 aa24.56■■□□□ 1.52
CMTM3-206ENST00000563672 LBX1P52954 281 aa24.56■■□□□ 1.52
CMTM3-206ENST00000563672 INHBEP58166 350 aa24.56■■□□□ 1.52
CMTM3-206ENST00000563672 ERO1BQ86YB8 467 aa24.56■■□□□ 1.52
CMTM3-206ENST00000563672 DHX36Q9H2U1 1008 aaKnown RBP24.56■■□□□ 1.52
CMTM3-206ENST00000563672 PRDM10Q9NQV6 1147 aa24.56■■□□□ 1.52
CMTM3-206ENST00000563672 ERC2O15083 957 aa24.55■■□□□ 1.52
CMTM3-206ENST00000563672 UBE3CQ15386 1083 aa24.55■■□□□ 1.52
CMTM3-206ENST00000563672 NOL9Q5SY16 702 aaKnown RBP24.55■■□□□ 1.52
CMTM3-206ENST00000563672 TSKSQ9UJT2 592 aa24.55■■□□□ 1.52
CMTM3-206ENST00000563672 TRPA1O75762 1119 aa24.54■■□□□ 1.52
CMTM3-206ENST00000563672 GLRX3O76003 335 aaKnown RBP24.54■■□□□ 1.52
CMTM3-206ENST00000563672 SLFNL1Q499Z3 407 aa24.54■■□□□ 1.52
CMTM3-206ENST00000563672 KBTBD3Q8NAB2 608 aa24.54■■□□□ 1.52
CMTM3-206ENST00000563672 PI4KBQ9UBF8 816 aa24.54■■□□□ 1.52
CMTM3-206ENST00000563672 STAP2Q9UGK3 403 aa24.54■■□□□ 1.52
CMTM3-206ENST00000563672 AK9Q5TCS8 1911 aa24.54■■□□□ 1.52
CMTM3-206ENST00000563672 TESPA1A2RU30 521 aaPredicted RBP24.53■■□□□ 1.52
CMTM3-206ENST00000563672 CHGBP05060 677 aa24.53■■□□□ 1.52
CMTM3-206ENST00000563672 ZSCAN25Q6NSZ9 544 aa24.53■■□□□ 1.52
CMTM3-206ENST00000563672 OTUD5Q96G74 571 aa24.53■■□□□ 1.52
CMTM3-206ENST00000563672 MS4A4AQ96JQ5 239 aa24.53■■□□□ 1.52
CMTM3-206ENST00000563672 PALD1Q9ULE6 856 aa24.53■■□□□ 1.52
CMTM3-206ENST00000563672 PPATQ06203 517 aa24.52■■□□□ 1.52
CMTM3-206ENST00000563672 COL13A1Q5TAT6 717 aaPredicted RBP24.52■■□□□ 1.52
CMTM3-206ENST00000563672 METTL16Q86W50 562 aaKnown RBP24.52■■□□□ 1.52
CMTM3-206ENST00000563672 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.52■■□□□ 1.52
CMTM3-206ENST00000563672 USP5P45974 858 aa24.51■■□□□ 1.51
CMTM3-206ENST00000563672 PPIL2Q13356 520 aa24.51■■□□□ 1.51
CMTM3-206ENST00000563672 B4GALNT3Q6L9W6 998 aa24.51■■□□□ 1.51
CMTM3-206ENST00000563672 FOXP4Q8IVH2 680 aaPredicted RBP24.51■■□□□ 1.51
CMTM3-206ENST00000563672 LCORLQ8N3X6 602 aa24.51■■□□□ 1.51
CMTM3-206ENST00000563672 CRNKL1Q9BZJ0 848 aaKnown RBP24.51■■□□□ 1.51
CMTM3-206ENST00000563672 LNPKQ9C0E8 428 aa24.51■■□□□ 1.51
CMTM3-206ENST00000563672 HERC5Q9UII4 1024 aaKnown RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms