RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 TBC1D9Q6ZT07 1266 aa7.57□□□□□ -1.2
CNOT1-204ENST00000563130 KCNV2Q8TDN2 545 aa7.57□□□□□ -1.2
CNOT1-204ENST00000563130 GCC1Q96CN9 775 aa7.57□□□□□ -1.2
CNOT1-204ENST00000563130 ABCF2Q9UG63 623 aa7.57□□□□□ -1.2
CNOT1-204ENST00000563130 POLR2AP24928 1970 aaKnown RBP7.57□□□□□ -1.2
CNOT1-204ENST00000563130 TMEM88BA6NKF7 163 aa7.56□□□□□ -1.2
CNOT1-204ENST00000563130 MYO1BO43795 1136 aa7.56□□□□□ -1.2
CNOT1-204ENST00000563130 ZAP70P43403 619 aa7.56□□□□□ -1.2
CNOT1-204ENST00000563130 RBM5P52756 815 aaKnown RBP eCLIP7.56□□□□□ -1.2
CNOT1-204ENST00000563130 APOBEC3FQ8IUX4 373 aaKnown RBP7.56□□□□□ -1.2
CNOT1-204ENST00000563130 SMC5Q8IY18 1101 aa7.56□□□□□ -1.2
CNOT1-204ENST00000563130 NSUN4Q96CB9 384 aaKnown RBP7.56□□□□□ -1.2
CNOT1-204ENST00000563130 TDRD3Q9H7E2 651 aaKnown RBP7.56□□□□□ -1.2
CNOT1-204ENST00000563130 SNRKQ9NRH2 765 aa7.56□□□□□ -1.2
CNOT1-204ENST00000563130 DAGLAQ9Y4D2 1042 aa7.56□□□□□ -1.2
CNOT1-204ENST00000563130 ECM29Q5VYK3 1845 aa7.56□□□□□ -1.2
CNOT1-204ENST00000563130 IGHDP01880 384 aa7.55□□□□□ -1.2
CNOT1-204ENST00000563130 ATP5JP18859 108 aa7.55□□□□□ -1.2
CNOT1-204ENST00000563130 IRX6P78412 446 aaPredicted RBP7.55□□□□□ -1.2
CNOT1-204ENST00000563130 HTRA3P83110 453 aa7.55□□□□□ -1.2
CNOT1-204ENST00000563130 MECOMQ03112 1051 aa7.55□□□□□ -1.2
CNOT1-204ENST00000563130 NBR1Q14596 966 aa7.55□□□□□ -1.2
CNOT1-204ENST00000563130 DNAJC5GQ8N7S2 189 aa7.55□□□□□ -1.2
CNOT1-204ENST00000563130 ZNF70Q9UC06 446 aaPredicted RBP7.55□□□□□ -1.2
CNOT1-204ENST00000563130 SCAF8Q9UPN6 1271 aaKnown RBP7.55□□□□□ -1.2
CNOT1-204ENST00000563130 CEP350Q5VT06 3117 aa7.55□□□□□ -1.2
CNOT1-204ENST00000563130 SALL3Q9BXA9 1300 aa7.55□□□□□ -1.2
CNOT1-204ENST00000563130 CLRN2A0PK11 232 aa7.55□□□□□ -1.2
CNOT1-204ENST00000563130 CELF2O95319 508 aaKnown RBP7.55□□□□□ -1.2
CNOT1-204ENST00000563130 FKBP1CQ5VVH2 108 aa7.55□□□□□ -1.2
CNOT1-204ENST00000563130 CDCA5Q96FF9 252 aa7.55□□□□□ -1.2
CNOT1-204ENST00000563130 DEFB129Q9H1M3 183 aa7.55□□□□□ -1.2
CNOT1-204ENST00000563130 RWDD1Q9H446 243 aaPredicted RBP7.55□□□□□ -1.2
CNOT1-204ENST00000563130 ANTXR1Q9H6X2 564 aa7.55□□□□□ -1.2
CNOT1-204ENST00000563130 PIH1D3Q9NQM4 214 aaKnown RBP7.55□□□□□ -1.2
CNOT1-204ENST00000563130 PPP2R3BQ9Y5P8 575 aa7.55□□□□□ -1.2
CNOT1-204ENST00000563130 NDUFB9Q9Y6M9 179 aa7.55□□□□□ -1.2
CNOT1-204ENST00000563130 TRPM7Q96QT4 1865 aa7.55□□□□□ -1.2
CNOT1-204ENST00000563130 GPR75-ASB3A0A0A6YYF3 556 aa7.54□□□□□ -1.2
CNOT1-204ENST00000563130 CDC42EP5Q6NZY7 148 aa7.54□□□□□ -1.2
CNOT1-204ENST00000563130 SAPCD2Q86UD0 394 aa7.54□□□□□ -1.2
CNOT1-204ENST00000563130 DZIP1Q86YF9 867 aaKnown RBP7.54□□□□□ -1.2
CNOT1-204ENST00000563130 SLF2Q8IX21 1173 aa7.54□□□□□ -1.2
CNOT1-204ENST00000563130 ECHDC1Q9NTX5 307 aa7.54□□□□□ -1.2
CNOT1-204ENST00000563130 LRP2BPQ9P2M1 347 aa7.54□□□□□ -1.2
CNOT1-204ENST00000563130 MROH7-TTC4A0A0A0MT08 1334 aa7.54□□□□□ -1.2
CNOT1-204ENST00000563130 POTEMA6NI47 508 aa7.54□□□□□ -1.2
CNOT1-204ENST00000563130 RASSF10A6NK89 507 aa7.54□□□□□ -1.2
CNOT1-204ENST00000563130 TNFAIP1Q13829 316 aa7.54□□□□□ -1.2
CNOT1-204ENST00000563130 RASA3Q14644 834 aa7.54□□□□□ -1.2
CNOT1-204ENST00000563130 PRAMEF18Q5VWM3 479 aa7.54□□□□□ -1.2
CNOT1-204ENST00000563130 TMED8Q6PL24 325 aaPredicted RBP7.54□□□□□ -1.2
CNOT1-204ENST00000563130 POTEGQ6S5H5 508 aa7.54□□□□□ -1.2
CNOT1-204ENST00000563130 FAM83AQ86UY5 434 aa7.54□□□□□ -1.2
CNOT1-204ENST00000563130 TEPSINQ96N21 525 aa7.54□□□□□ -1.2
CNOT1-204ENST00000563130 HAUS7Q99871 368 aa7.54□□□□□ -1.2
CNOT1-204ENST00000563130 VEZTQ9HBM0 779 aa7.54□□□□□ -1.2
CNOT1-204ENST00000563130 RAI14Q9P0K7 980 aa7.54□□□□□ -1.2
CNOT1-204ENST00000563130 TLL2Q9Y6L7 1015 aa7.54□□□□□ -1.2
CNOT1-204ENST00000563130 CNTNAP1P78357 1384 aa7.54□□□□□ -1.2
CNOT1-204ENST00000563130 RFX7Q2KHR2 1363 aa7.54□□□□□ -1.2
CNOT1-204ENST00000563130 FAM205CA6NFA0 338 aa7.53□□□□□ -1.2
CNOT1-204ENST00000563130 RHBDL3P58872 404 aa7.53□□□□□ -1.2
CNOT1-204ENST00000563130 FKBP1BP68106 108 aa7.53□□□□□ -1.2
CNOT1-204ENST00000563130 ADGRA1Q86SQ6 560 aa7.53□□□□□ -1.2
CNOT1-204ENST00000563130 OTUD7AQ8TE49 926 aaPredicted RBP7.53□□□□□ -1.2
CNOT1-204ENST00000563130 HHIPL1Q96JK4 782 aa7.53□□□□□ -1.2
CNOT1-204ENST00000563130 IDI2Q9BXS1 227 aa7.53□□□□□ -1.2
CNOT1-204ENST00000563130 BOLA2Q9H3K6 86 aa7.53□□□□□ -1.2
CNOT1-204ENST00000563130 GBA2Q9HCG7 927 aaPredicted RBP7.53□□□□□ -1.2
CNOT1-204ENST00000563130 LHX6Q9UPM6 363 aa7.53□□□□□ -1.2
CNOT1-204ENST00000563130 SSC5DA1L4H1 1573 aa7.53□□□□□ -1.2
CNOT1-204ENST00000563130 DOCK2Q92608 1830 aa7.53□□□□□ -1.2
CNOT1-204ENST00000563130 TTC41PQ6P2S7 1318 aa7.53□□□□□ -1.2
CNOT1-204ENST00000563130 MYH2Q9UKX2 1941 aa7.53□□□□□ -1.2
CNOT1-204ENST00000563130 LDHCP07864 332 aa7.53□□□□□ -1.2
CNOT1-204ENST00000563130 BTDP43251 543 aa7.53□□□□□ -1.2
CNOT1-204ENST00000563130 CACNB3P54284 484 aa7.53□□□□□ -1.2
CNOT1-204ENST00000563130 PPP4CP60510 307 aa7.53□□□□□ -1.2
CNOT1-204ENST00000563130 GSTO1P78417 241 aa7.53□□□□□ -1.2
CNOT1-204ENST00000563130 NFIAQ12857 509 aa7.53□□□□□ -1.2
CNOT1-204ENST00000563130 TTF1Q15361 905 aaPredicted RBP7.53□□□□□ -1.2
CNOT1-204ENST00000563130 ANKRD45Q5TZF3 282 aa7.53□□□□□ -1.2
CNOT1-204ENST00000563130 NAA16Q6N069 864 aaPredicted RBP7.53□□□□□ -1.2
CNOT1-204ENST00000563130 PI4K2BQ8TCG2 481 aa7.53□□□□□ -1.2
CNOT1-204ENST00000563130 ZNF408Q9H9D4 720 aa7.53□□□□□ -1.2
CNOT1-204ENST00000563130 RPAP1Q9BWH6 1393 aaPredicted RBP7.52□□□□□ -1.2
CNOT1-204ENST00000563130 MAST2Q6P0Q8 1798 aa7.52□□□□□ -1.2
CNOT1-204ENST00000563130 MYO5AQ9Y4I1 1855 aaKnown RBP7.52□□□□□ -1.21
CNOT1-204ENST00000563130 TCP10L2B9ZVM9 353 aa7.52□□□□□ -1.21
CNOT1-204ENST00000563130 WDHD1O75717 1129 aaPredicted RBP7.52□□□□□ -1.21
CNOT1-204ENST00000563130 IDH1O75874 414 aaKnown RBP7.52□□□□□ -1.21
CNOT1-204ENST00000563130 MAP4K4O95819 1239 aaPredicted RBP7.52□□□□□ -1.21
CNOT1-204ENST00000563130 TNNI2P48788 182 aa7.52□□□□□ -1.21
CNOT1-204ENST00000563130 MAP3K11Q16584 847 aa7.52□□□□□ -1.21
CNOT1-204ENST00000563130 NBPF12Q5TAG4 269 aaPredicted RBP7.52□□□□□ -1.21
CNOT1-204ENST00000563130 CDAN1Q8IWY9 1227 aa7.52□□□□□ -1.21
CNOT1-204ENST00000563130 KLRG1Q96E93 195 aa7.52□□□□□ -1.21
CNOT1-204ENST00000563130 EDC3Q96F86 508 aaKnown RBP7.52□□□□□ -1.21
CNOT1-204ENST00000563130 TMEM39BQ9GZU3 492 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms