RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	KIF16B	Q96L93	1317 aa		10.55	□□□□□ -0.72
CKLF-208	ENST00000563092	SGPL1	O95470	568 aa		10.54	□□□□□ -0.72
CKLF-208	ENST00000563092	INPP5B	P32019	993 aa		10.54	□□□□□ -0.72
CKLF-208	ENST00000563092	VASP	P50552	380 aa	Predicted RBP	10.54	□□□□□ -0.72
CKLF-208	ENST00000563092	PRKCZ	Q05513	592 aa		10.54	□□□□□ -0.72
CKLF-208	ENST00000563092	DCAF15	Q66K64	600 aa		10.54	□□□□□ -0.72
CKLF-208	ENST00000563092	GPR153	Q6NV75	609 aa		10.54	□□□□□ -0.72
CKLF-208	ENST00000563092	RAET1E	Q8TD07	263 aa		10.54	□□□□□ -0.72
CKLF-208	ENST00000563092	ZNF341	Q9BYN7	854 aa		10.54	□□□□□ -0.72
CKLF-208	ENST00000563092	RNF208	Q9H0X6	261 aa		10.54	□□□□□ -0.72
CKLF-208	ENST00000563092	CHMP3	Q9Y3E7	222 aa		10.54	□□□□□ -0.72
CKLF-208	ENST00000563092	FANCI	Q9NVI1	1328 aa		10.54	□□□□□ -0.72
CKLF-208	ENST00000563092	ATRNL1	Q5VV63	1379 aa		10.53	□□□□□ -0.72
CKLF-208	ENST00000563092	ALDH1L1	O75891	902 aa		10.53	□□□□□ -0.72
CKLF-208	ENST00000563092	FARP2	O94887	1054 aa	Predicted RBP	10.53	□□□□□ -0.72
CKLF-208	ENST00000563092	FMNL1	O95466	1100 aa	Predicted RBP	10.53	□□□□□ -0.72
CKLF-208	ENST00000563092	UBXN2A	P68543	259 aa		10.53	□□□□□ -0.72
CKLF-208	ENST00000563092	RABL6	Q3YEC7	729 aa	Predicted RBP	10.53	□□□□□ -0.72
CKLF-208	ENST00000563092	TAF7L	Q5H9L4	462 aa		10.53	□□□□□ -0.72
CKLF-208	ENST00000563092	PXYLP1	Q8TE99	480 aa		10.53	□□□□□ -0.72
CKLF-208	ENST00000563092	FAM151A	Q8WW52	585 aa		10.53	□□□□□ -0.72
CKLF-208	ENST00000563092	CRISPLD2	Q9H0B8	497 aa		10.53	□□□□□ -0.72
CKLF-208	ENST00000563092	UNC93B1	Q9H1C4	597 aa		10.53	□□□□□ -0.72
CKLF-208	ENST00000563092	PAK6	Q9NQU5	681 aa	Predicted RBP	10.53	□□□□□ -0.72
CKLF-208	ENST00000563092	CXCL11	O14625	94 aa		10.52	□□□□□ -0.73
CKLF-208	ENST00000563092	FGFR2	P21802	821 aa		10.52	□□□□□ -0.73
CKLF-208	ENST00000563092	BMP8B	P34820	402 aa		10.52	□□□□□ -0.73
CKLF-208	ENST00000563092	FCGRT	P55899	365 aa		10.52	□□□□□ -0.73
CKLF-208	ENST00000563092	IRF5	Q13568	498 aa		10.52	□□□□□ -0.73
CKLF-208	ENST00000563092	GSE1	Q14687	1217 aa		10.52	□□□□□ -0.73
CKLF-208	ENST00000563092	MIGA2	Q7L4E1	593 aa		10.52	□□□□□ -0.73
CKLF-208	ENST00000563092	GDF15	Q99988	308 aa		10.52	□□□□□ -0.73
CKLF-208	ENST00000563092	TMOD2	Q9NZR1	351 aa		10.52	□□□□□ -0.73
CKLF-208	ENST00000563092	GABRQ	Q9UN88	632 aa		10.52	□□□□□ -0.73
CKLF-208	ENST00000563092	UNC80	Q8N2C7	3258 aa		10.52	□□□□□ -0.73
CKLF-208	ENST00000563092	MAST3	O60307	1309 aa		10.52	□□□□□ -0.73
CKLF-208	ENST00000563092	PHF20L1	A8MW92	1017 aa		10.51	□□□□□ -0.73
CKLF-208	ENST00000563092	PDE8B	O95263	885 aa		10.51	□□□□□ -0.73
CKLF-208	ENST00000563092	MAP3K10	Q02779	954 aa		10.51	□□□□□ -0.73
CKLF-208	ENST00000563092	LRRC24	Q50LG9	513 aa		10.51	□□□□□ -0.73
CKLF-208	ENST00000563092	SUCLG2	Q96I99	432 aa		10.51	□□□□□ -0.73
CKLF-208	ENST00000563092	LRCH3	Q96II8	777 aa		10.51	□□□□□ -0.73
CKLF-208	ENST00000563092	PARK7	Q99497	189 aa	Known RBP	10.51	□□□□□ -0.73
CKLF-208	ENST00000563092	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.51	□□□□□ -0.73
CKLF-208	ENST00000563092	SLC45A1	Q9Y2W3	748 aa		10.51	□□□□□ -0.73
CKLF-208	ENST00000563092		A0A0G2JLL6	359 aa	Predicted RBP	10.5	□□□□□ -0.73
CKLF-208	ENST00000563092	ADCY3	O60266	1144 aa		10.5	□□□□□ -0.73
CKLF-208	ENST00000563092	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.5	□□□□□ -0.73
CKLF-208	ENST00000563092	CYP2C8	P10632	490 aa		10.5	□□□□□ -0.73
CKLF-208	ENST00000563092	FLT3LG	P49771	235 aa		10.5	□□□□□ -0.73
CKLF-208	ENST00000563092	BCAM	P50895	628 aa		10.5	□□□□□ -0.73
CKLF-208	ENST00000563092	CHAF1A	Q13111	956 aa	Predicted RBP	10.5	□□□□□ -0.73
CKLF-208	ENST00000563092	CAVIN4	Q5BKX8	364 aa		10.5	□□□□□ -0.73
CKLF-208	ENST00000563092	PRRT2	Q7Z6L0	340 aa	Predicted RBP	10.5	□□□□□ -0.73
CKLF-208	ENST00000563092	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.5	□□□□□ -0.73
CKLF-208	ENST00000563092	WDR63	Q8IWG1	891 aa		10.5	□□□□□ -0.73
CKLF-208	ENST00000563092	ANKRD44	Q8N8A2	993 aa		10.5	□□□□□ -0.73
CKLF-208	ENST00000563092	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.5	□□□□□ -0.73
CKLF-208	ENST00000563092	FAM198A	Q9UFP1	575 aa		10.5	□□□□□ -0.73
CKLF-208	ENST00000563092	MGAM	O43451	1857 aa		10.49	□□□□□ -0.73
CKLF-208	ENST00000563092	EVI5	O60447	810 aa		10.49	□□□□□ -0.73
CKLF-208	ENST00000563092	INHA	P05111	366 aa		10.49	□□□□□ -0.73
CKLF-208	ENST00000563092	EXOSC9	Q06265	439 aa	Known RBP	10.49	□□□□□ -0.73
CKLF-208	ENST00000563092	NFIA	Q12857	509 aa		10.49	□□□□□ -0.73
CKLF-208	ENST00000563092	CCDC184	Q52MB2	194 aa		10.49	□□□□□ -0.73
CKLF-208	ENST00000563092	CDC42EP5	Q6NZY7	148 aa		10.49	□□□□□ -0.73
CKLF-208	ENST00000563092	VPS37D	Q86XT2	251 aa		10.49	□□□□□ -0.73
CKLF-208	ENST00000563092	STAP2	Q9UGK3	403 aa		10.49	□□□□□ -0.73
CKLF-208	ENST00000563092	DAGLA	Q9Y4D2	1042 aa		10.49	□□□□□ -0.73
CKLF-208	ENST00000563092	AFG3L2	Q9Y4W6	797 aa		10.49	□□□□□ -0.73
CKLF-208	ENST00000563092	RFX7	Q2KHR2	1363 aa		10.49	□□□□□ -0.73
CKLF-208	ENST00000563092	ECM2	O94769	699 aa	Predicted RBP	10.48	□□□□□ -0.73
CKLF-208	ENST00000563092	ELN	P15502	786 aa		10.48	□□□□□ -0.73
CKLF-208	ENST00000563092	PTPRA	P18433	802 aa		10.48	□□□□□ -0.73
CKLF-208	ENST00000563092	LRIT3	Q3SXY7	679 aa		10.48	□□□□□ -0.73
CKLF-208	ENST00000563092	METTL24	Q5JXM2	366 aa		10.48	□□□□□ -0.73
CKLF-208	ENST00000563092	FASTKD5	Q7L8L6	764 aa	Known RBP	10.48	□□□□□ -0.73
CKLF-208	ENST00000563092	ANKLE1	Q8NAG6	615 aa		10.48	□□□□□ -0.73
CKLF-208	ENST00000563092	WDR66	Q8TBY9	1149 aa		10.48	□□□□□ -0.73
CKLF-208	ENST00000563092	DEFB118	Q96PH6	123 aa		10.48	□□□□□ -0.73
CKLF-208	ENST00000563092	SRCIN1	Q9C0H9	1055 aa		10.48	□□□□□ -0.73
CKLF-208	ENST00000563092	BICC1	Q9H694	974 aa	Known RBP	10.48	□□□□□ -0.73
CKLF-208	ENST00000563092	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.48	□□□□□ -0.73
CKLF-208	ENST00000563092	BIN2	Q9UBW5	565 aa	Predicted RBP	10.48	□□□□□ -0.73
CKLF-208	ENST00000563092	ALPK3	Q96L96	1907 aa		10.48	□□□□□ -0.73
CKLF-208	ENST00000563092	FRAT2	O75474	233 aa	Predicted RBP	10.47	□□□□□ -0.73
CKLF-208	ENST00000563092	TCP10	Q12799	353 aa		10.47	□□□□□ -0.73
CKLF-208	ENST00000563092	PUM3	Q15397	648 aa	Known RBP	10.47	□□□□□ -0.73
CKLF-208	ENST00000563092	ZFPM1	Q8IX07	1006 aa		10.47	□□□□□ -0.73
CKLF-208	ENST00000563092	SCYL3	Q8IZE3	742 aa		10.47	□□□□□ -0.73
CKLF-208	ENST00000563092	PDCD7	Q8N8D1	485 aa	Known RBP	10.47	□□□□□ -0.73
CKLF-208	ENST00000563092	PAWR	Q96IZ0	340 aa	Known RBP	10.47	□□□□□ -0.73
CKLF-208	ENST00000563092	IDI2	Q9BXS1	227 aa		10.47	□□□□□ -0.73
CKLF-208	ENST00000563092	STXBP5L	Q9Y2K9	1186 aa		10.47	□□□□□ -0.73
CKLF-208	ENST00000563092	SALL1	Q9NSC2	1324 aa		10.47	□□□□□ -0.73
CKLF-208	ENST00000563092	TFRC	P02786	760 aa	Known RBP	10.46	□□□□□ -0.73
CKLF-208	ENST00000563092	RFX5	P48382	616 aa	Predicted RBP	10.46	□□□□□ -0.73
CKLF-208	ENST00000563092	DIXDC1	Q155Q3	683 aa		10.46	□□□□□ -0.73
CKLF-208	ENST00000563092	SH3BP5L	Q7L8J4	393 aa		10.46	□□□□□ -0.73
CKLF-208	ENST00000563092	DIS3L	Q8TF46	1054 aa	Known RBP	10.46	□□□□□ -0.73

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