RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 OTUD7BQ6GQQ9 843 aa11.43□□□□□ -0.58
CHRFAM7A-204ENST00000562729 ERICH6Q7L0X2 663 aa11.43□□□□□ -0.58
CHRFAM7A-204ENST00000562729 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.43□□□□□ -0.58
CHRFAM7A-204ENST00000562729 NOL10Q9BSC4 688 aaKnown RBP11.43□□□□□ -0.58
CHRFAM7A-204ENST00000562729 CHMP4BQ9H444 224 aaKnown RBP11.43□□□□□ -0.58
CHRFAM7A-204ENST00000562729 USP40Q9NVE5 1235 aa11.43□□□□□ -0.58
CHRFAM7A-204ENST00000562729 RCAN3Q9UKA8 241 aa11.43□□□□□ -0.58
CHRFAM7A-204ENST00000562729 SALL1Q9NSC2 1324 aa11.42□□□□□ -0.58
CHRFAM7A-204ENST00000562729 MANSC4A6NHS7 340 aaPredicted RBP11.42□□□□□ -0.58
CHRFAM7A-204ENST00000562729 ZBTB7BO15156 539 aaPredicted RBP11.42□□□□□ -0.58
CHRFAM7A-204ENST00000562729 USP2O75604 605 aaPredicted RBP11.42□□□□□ -0.58
CHRFAM7A-204ENST00000562729 UQCRFS1P1P0C7P4 283 aa11.42□□□□□ -0.58
CHRFAM7A-204ENST00000562729 ZBTB48P10074 688 aaPredicted RBP11.42□□□□□ -0.58
CHRFAM7A-204ENST00000562729 RLBP1P12271 317 aa11.42□□□□□ -0.58
CHRFAM7A-204ENST00000562729 INHBEP58166 350 aa11.42□□□□□ -0.58
CHRFAM7A-204ENST00000562729 GSTO1P78417 241 aa11.42□□□□□ -0.58
CHRFAM7A-204ENST00000562729 TCP10Q12799 353 aa11.42□□□□□ -0.58
CHRFAM7A-204ENST00000562729 DGKZQ13574 1117 aa11.42□□□□□ -0.58
CHRFAM7A-204ENST00000562729 MAP3K11Q16584 847 aa11.42□□□□□ -0.58
CHRFAM7A-204ENST00000562729 VARS2Q5ST30 1063 aaKnown RBP11.42□□□□□ -0.58
CHRFAM7A-204ENST00000562729 APOBEC3HQ6NTF7 200 aaKnown RBP11.42□□□□□ -0.58
CHRFAM7A-204ENST00000562729 FAM83AQ86UY5 434 aa11.42□□□□□ -0.58
CHRFAM7A-204ENST00000562729 ZSCAN29Q8IWY8 852 aaPredicted RBP11.42□□□□□ -0.58
CHRFAM7A-204ENST00000562729 SPATA5Q8NB90 893 aa11.42□□□□□ -0.58
CHRFAM7A-204ENST00000562729 CLMNQ96JQ2 1002 aa11.42□□□□□ -0.58
CHRFAM7A-204ENST00000562729 BCL11AQ9H165 835 aa11.42□□□□□ -0.58
CHRFAM7A-204ENST00000562729 ELP3Q9H9T3 547 aa11.42□□□□□ -0.58
CHRFAM7A-204ENST00000562729 RAI14Q9P0K7 980 aa11.42□□□□□ -0.58
CHRFAM7A-204ENST00000562729 AK9Q5TCS8 1911 aa11.42□□□□□ -0.58
CHRFAM7A-204ENST00000562729 SSC5DA1L4H1 1573 aa11.41□□□□□ -0.58
CHRFAM7A-204ENST00000562729 CCDC85CA6NKD9 419 aa11.41□□□□□ -0.58
CHRFAM7A-204ENST00000562729 TBC1D8O95759 1140 aa11.41□□□□□ -0.58
CHRFAM7A-204ENST00000562729 ALDH1A1P00352 501 aa11.41□□□□□ -0.58
CHRFAM7A-204ENST00000562729 FKBP1CQ5VVH2 108 aa11.41□□□□□ -0.58
CHRFAM7A-204ENST00000562729 SSH3Q8TE77 659 aa11.41□□□□□ -0.58
CHRFAM7A-204ENST00000562729 OPTNQ96CV9 577 aa11.41□□□□□ -0.58
CHRFAM7A-204ENST00000562729 WNK4Q96J92 1243 aa11.41□□□□□ -0.58
CHRFAM7A-204ENST00000562729 MS4A4AQ96JQ5 239 aa11.41□□□□□ -0.58
CHRFAM7A-204ENST00000562729 LRP2BPQ9P2M1 347 aa11.41□□□□□ -0.58
CHRFAM7A-204ENST00000562729 DDX19BQ9UMR2 479 aa11.41□□□□□ -0.58
CHRFAM7A-204ENST00000562729 DAGLAQ9Y4D2 1042 aa11.41□□□□□ -0.58
CHRFAM7A-204ENST00000562729 PDS5AQ29RF7 1337 aaKnown RBP11.4□□□□□ -0.58
CHRFAM7A-204ENST00000562729 CASP8AP2Q9UKL3 1982 aa11.4□□□□□ -0.58
CHRFAM7A-204ENST00000562729 HMMRO75330 724 aa11.4□□□□□ -0.58
CHRFAM7A-204ENST00000562729 WDHD1O75717 1129 aaPredicted RBP11.4□□□□□ -0.58
CHRFAM7A-204ENST00000562729 LDHCP07864 332 aa11.4□□□□□ -0.58
CHRFAM7A-204ENST00000562729 TM4SF4P48230 202 aa11.4□□□□□ -0.58
CHRFAM7A-204ENST00000562729 MAP3K9P80192 1104 aa11.4□□□□□ -0.58
CHRFAM7A-204ENST00000562729 HSP90AB4PQ58FF6 505 aa11.4□□□□□ -0.58
CHRFAM7A-204ENST00000562729 TNNI3KQ59H18 835 aa11.4□□□□□ -0.58
CHRFAM7A-204ENST00000562729 CDC42EP5Q6NZY7 148 aa11.4□□□□□ -0.58
CHRFAM7A-204ENST00000562729 ERC1Q8IUD2 1116 aa11.4□□□□□ -0.58
CHRFAM7A-204ENST00000562729 FAM151AQ8WW52 585 aa11.4□□□□□ -0.58
CHRFAM7A-204ENST00000562729 RNF25Q96BH1 459 aaPredicted RBP11.4□□□□□ -0.58
CHRFAM7A-204ENST00000562729 ABHD8Q96I13 439 aa11.4□□□□□ -0.58
CHRFAM7A-204ENST00000562729 WRNIP1Q96S55 665 aa11.4□□□□□ -0.58
CHRFAM7A-204ENST00000562729 ZSWIM6Q9HCJ5 1215 aa11.4□□□□□ -0.58
CHRFAM7A-204ENST00000562729 COG6Q9Y2V7 657 aa11.4□□□□□ -0.58
CHRFAM7A-204ENST00000562729 FPGT-TNNI3KV9GXZ4 949 aa11.4□□□□□ -0.58
CHRFAM7A-204ENST00000562729 APBB1O00213 710 aa11.39□□□□□ -0.59
CHRFAM7A-204ENST00000562729 BTDP43251 543 aa11.39□□□□□ -0.59
CHRFAM7A-204ENST00000562729 MECOMQ03112 1051 aa11.39□□□□□ -0.59
CHRFAM7A-204ENST00000562729 PICALMQ13492 652 aa11.39□□□□□ -0.59
CHRFAM7A-204ENST00000562729 VGLL4Q14135 290 aa11.39□□□□□ -0.59
CHRFAM7A-204ENST00000562729 GPR153Q6NV75 609 aa11.39□□□□□ -0.59
CHRFAM7A-204ENST00000562729 CEP85Q6P2H3 762 aa11.39□□□□□ -0.59
CHRFAM7A-204ENST00000562729 MIGA2Q7L4E1 593 aa11.39□□□□□ -0.59
CHRFAM7A-204ENST00000562729 TEPSINQ96N21 525 aa11.39□□□□□ -0.59
CHRFAM7A-204ENST00000562729 ZNF341Q9BYN7 854 aa11.39□□□□□ -0.59
CHRFAM7A-204ENST00000562729 GPR108Q9NPR9 543 aa11.39□□□□□ -0.59
CHRFAM7A-204ENST00000562729 HMG20BQ9P0W2 317 aa11.39□□□□□ -0.59
CHRFAM7A-204ENST00000562729 MYH2Q9UKX2 1941 aa11.39□□□□□ -0.59
CHRFAM7A-204ENST00000562729 RIOK3O14730 519 aaKnown RBP11.38□□□□□ -0.59
CHRFAM7A-204ENST00000562729 ARID4AP29374 1257 aaPredicted RBP11.38□□□□□ -0.59
CHRFAM7A-204ENST00000562729 PI16Q6UXB8 463 aa11.38□□□□□ -0.59
CHRFAM7A-204ENST00000562729 TBC1D9Q6ZT07 1266 aa11.38□□□□□ -0.59
CHRFAM7A-204ENST00000562729 MCOLN1Q9GZU1 580 aa11.38□□□□□ -0.59
CHRFAM7A-204ENST00000562729 SNRKQ9NRH2 765 aa11.38□□□□□ -0.59
CHRFAM7A-204ENST00000562729 EXOC6BQ9Y2D4 811 aa11.38□□□□□ -0.59
CHRFAM7A-204ENST00000562729 MROH7-TTC4A0A0A0MT08 1334 aa11.37□□□□□ -0.59
CHRFAM7A-204ENST00000562729 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.37□□□□□ -0.59
CHRFAM7A-204ENST00000562729 RGS3P49796 1198 aa11.37□□□□□ -0.59
CHRFAM7A-204ENST00000562729 GTF2A2P52657 109 aa11.37□□□□□ -0.59
CHRFAM7A-204ENST00000562729 NFIAQ12857 509 aa11.37□□□□□ -0.59
CHRFAM7A-204ENST00000562729 AACSQ86V21 672 aa11.37□□□□□ -0.59
CHRFAM7A-204ENST00000562729 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.37□□□□□ -0.59
CHRFAM7A-204ENST00000562729 ZKSCAN4Q969J2 545 aaPredicted RBP11.37□□□□□ -0.59
CHRFAM7A-204ENST00000562729 ZFP91Q96JP5 570 aaPredicted RBP11.37□□□□□ -0.59
CHRFAM7A-204ENST00000562729 DBNDD2Q9BQY9 259 aa11.37□□□□□ -0.59
CHRFAM7A-204ENST00000562729 CCDC8Q9H0W5 538 aaPredicted RBP11.37□□□□□ -0.59
CHRFAM7A-204ENST00000562729 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.37□□□□□ -0.59
CHRFAM7A-204ENST00000562729 OTOFQ9HC10 1997 aa11.37□□□□□ -0.59
CHRFAM7A-204ENST00000562729 RPAP1Q9BWH6 1393 aaPredicted RBP11.37□□□□□ -0.59
CHRFAM7A-204ENST00000562729 CCL15-CCL14A0A0B4J2E2 113 aa11.36□□□□□ -0.59
CHRFAM7A-204ENST00000562729 GPR25O00155 361 aa11.36□□□□□ -0.59
CHRFAM7A-204ENST00000562729 FKTNO75072 461 aa11.36□□□□□ -0.59
CHRFAM7A-204ENST00000562729 ENTPD3O75355 529 aa11.36□□□□□ -0.59
CHRFAM7A-204ENST00000562729 BAG3O95817 575 aa11.36□□□□□ -0.59
CHRFAM7A-204ENST00000562729 MCAMP43121 646 aa11.36□□□□□ -0.59
CHRFAM7A-204ENST00000562729 CCL15Q16663 113 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms