RNA–Protein interactions for RNA: ENST00000562656.1

AC009055.1-201, humanhuman

TSL 3 BASIC

Gene AC009055.1, Length 781 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009055.1-201ENST00000562656 CXCL11O14625 94 aa16.12■□□□□ 0.17
AC009055.1-201ENST00000562656 RHBDL3P58872 404 aa16.12■□□□□ 0.17
AC009055.1-201ENST00000562656 ANKRD23Q86SG2 305 aa16.12■□□□□ 0.17
AC009055.1-201ENST00000562656 ITPRIPQ8IWB1 547 aa16.12■□□□□ 0.17
AC009055.1-201ENST00000562656 NSUN4Q96CB9 384 aaKnown RBP16.12■□□□□ 0.17
AC009055.1-201ENST00000562656 NOP58Q9Y2X3 529 aaKnown RBP16.12■□□□□ 0.17
AC009055.1-201ENST00000562656 PHF20L1A8MW92 1017 aa16.11■□□□□ 0.17
AC009055.1-201ENST00000562656 SURF6O75683 361 aaKnown RBP16.11■□□□□ 0.17
AC009055.1-201ENST00000562656 MCAMP43121 646 aa16.11■□□□□ 0.17
AC009055.1-201ENST00000562656 TNNI3KQ59H18 835 aa16.11■□□□□ 0.17
AC009055.1-201ENST00000562656 CCDC158Q5M9N0 1113 aa16.11■□□□□ 0.17
AC009055.1-201ENST00000562656 SH3BP5LQ7L8J4 393 aa16.11■□□□□ 0.17
AC009055.1-201ENST00000562656 ZSCAN29Q8IWY8 852 aaPredicted RBP16.11■□□□□ 0.17
AC009055.1-201ENST00000562656 SCYL3Q8IZE3 742 aa16.11■□□□□ 0.17
AC009055.1-201ENST00000562656 ZNF384Q8TF68 577 aa16.11■□□□□ 0.17
AC009055.1-201ENST00000562656 ZNF512BQ96KM6 892 aaPredicted RBP16.11■□□□□ 0.17
AC009055.1-201ENST00000562656 FPGT-TNNI3KV9GXZ4 949 aa16.11■□□□□ 0.17
AC009055.1-201ENST00000562656 TBC1D12O60347 775 aa16.1■□□□□ 0.17
AC009055.1-201ENST00000562656 GNRH1P01148 92 aa16.1■□□□□ 0.17
AC009055.1-201ENST00000562656 RLBP1P12271 317 aa16.1■□□□□ 0.17
AC009055.1-201ENST00000562656 OS9Q13438 667 aaPredicted RBP16.1■□□□□ 0.17
AC009055.1-201ENST00000562656 PI16Q6UXB8 463 aa16.1■□□□□ 0.17
AC009055.1-201ENST00000562656 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.1■□□□□ 0.17
AC009055.1-201ENST00000562656 ARMC5Q96C12 935 aa16.1■□□□□ 0.17
AC009055.1-201ENST00000562656 DDX4Q9NQI0 724 aaKnown RBP16.1■□□□□ 0.17
AC009055.1-201ENST00000562656 RAI14Q9P0K7 980 aa16.1■□□□□ 0.17
AC009055.1-201ENST00000562656 COL2A1P02458 1487 aaPredicted RBP16.1■□□□□ 0.17
AC009055.1-201ENST00000562656 DDTLA6NHG4 134 aaPredicted RBP16.09■□□□□ 0.17
AC009055.1-201ENST00000562656 CTNND1O60716 968 aaKnown RBP16.09■□□□□ 0.17
AC009055.1-201ENST00000562656 MS4A1P11836 297 aa16.09■□□□□ 0.17
AC009055.1-201ENST00000562656 KIF22Q14807 665 aa16.09■□□□□ 0.17
AC009055.1-201ENST00000562656 TTC39AQ5SRH9 613 aa16.09■□□□□ 0.17
AC009055.1-201ENST00000562656 TBC1D9Q6ZT07 1266 aa16.09■□□□□ 0.17
AC009055.1-201ENST00000562656 PICK1Q9NRD5 415 aa16.09■□□□□ 0.17
AC009055.1-201ENST00000562656 LRP2BPQ9P2M1 347 aa16.09■□□□□ 0.17
AC009055.1-201ENST00000562656 PTPRAP18433 802 aa16.08■□□□□ 0.16
AC009055.1-201ENST00000562656 LACTBP83111 547 aaPredicted RBP16.08■□□□□ 0.16
AC009055.1-201ENST00000562656 CAP1Q01518 475 aa16.08■□□□□ 0.16
AC009055.1-201ENST00000562656 PICALMQ13492 652 aa16.08■□□□□ 0.16
AC009055.1-201ENST00000562656 MOGSQ13724 837 aa16.08■□□□□ 0.16
AC009055.1-201ENST00000562656 C17orf99Q6UX52 265 aa16.08■□□□□ 0.16
AC009055.1-201ENST00000562656 FASTKD5Q7L8L6 764 aaKnown RBP16.08■□□□□ 0.16
AC009055.1-201ENST00000562656 DBNDD2Q9BQY9 259 aa16.08■□□□□ 0.16
AC009055.1-201ENST00000562656 C1orf115Q9H7X2 142 aa16.08■□□□□ 0.16
AC009055.1-201ENST00000562656 PDHXO00330 501 aa16.07■□□□□ 0.16
AC009055.1-201ENST00000562656 BAG3O95817 575 aa16.07■□□□□ 0.16
AC009055.1-201ENST00000562656 PRMT2P55345 433 aa16.07■□□□□ 0.16
AC009055.1-201ENST00000562656 ZHX2Q9Y6X8 837 aa16.07■□□□□ 0.16
AC009055.1-201ENST00000562656 RBBP6Q7Z6E9 1792 aaKnown RBP16.07■□□□□ 0.16
AC009055.1-201ENST00000562656 DOCK1Q14185 1865 aa16.07■□□□□ 0.16
AC009055.1-201ENST00000562656 PDE4DIPQ5VU43 2346 aa16.07■□□□□ 0.16
AC009055.1-201ENST00000562656 MAST2Q6P0Q8 1798 aa16.06■□□□□ 0.16
AC009055.1-201ENST00000562656 PLCG2P16885 1265 aa16.06■□□□□ 0.16
AC009055.1-201ENST00000562656 PPP4CP60510 307 aa16.06■□□□□ 0.16
AC009055.1-201ENST00000562656 CEP85Q6P2H3 762 aa16.06■□□□□ 0.16
AC009055.1-201ENST00000562656 NBPF11Q86T75 865 aa16.06■□□□□ 0.16
AC009055.1-201ENST00000562656 NOL10Q9BSC4 688 aaKnown RBP16.06■□□□□ 0.16
AC009055.1-201ENST00000562656 OSBPL5Q9H0X9 879 aaPredicted RBP16.06■□□□□ 0.16
AC009055.1-201ENST00000562656 SLC45A1Q9Y2W3 748 aa16.06■□□□□ 0.16
AC009055.1-201ENST00000562656 AFG3L2Q9Y4W6 797 aa16.06■□□□□ 0.16
AC009055.1-201ENST00000562656 ADGRA2Q96PE1 1338 aa16.05■□□□□ 0.16
AC009055.1-201ENST00000562656 A0A0G2JLL6 359 aaPredicted RBP16.05■□□□□ 0.16
AC009055.1-201ENST00000562656 CYP2E1P05181 493 aaPredicted RBP16.05■□□□□ 0.16
AC009055.1-201ENST00000562656 NAA16Q6N069 864 aaPredicted RBP16.05■□□□□ 0.16
AC009055.1-201ENST00000562656 GPAT2Q6NUI2 795 aa16.05■□□□□ 0.16
AC009055.1-201ENST00000562656 PRRT2Q7Z6L0 340 aaPredicted RBP16.05■□□□□ 0.16
AC009055.1-201ENST00000562656 ERC1Q8IUD2 1116 aa16.05■□□□□ 0.16
AC009055.1-201ENST00000562656 TEX11Q8IYF3 940 aa16.05■□□□□ 0.16
AC009055.1-201ENST00000562656 PARK7Q99497 189 aaKnown RBP16.05■□□□□ 0.16
AC009055.1-201ENST00000562656 TBC1D2Q9BYX2 928 aa16.05■□□□□ 0.16
AC009055.1-201ENST00000562656 DHX36Q9H2U1 1008 aaKnown RBP16.05■□□□□ 0.16
AC009055.1-201ENST00000562656 SNRKQ9NRH2 765 aa16.05■□□□□ 0.16
AC009055.1-201ENST00000562656 DBNLQ9UJU6 430 aaKnown RBP16.05■□□□□ 0.16
AC009055.1-201ENST00000562656 PHIPQ8WWQ0 1821 aa16.04■□□□□ 0.16
AC009055.1-201ENST00000562656 HSP90AB4PQ58FF6 505 aa16.04■□□□□ 0.16
AC009055.1-201ENST00000562656 TMED8Q6PL24 325 aaPredicted RBP16.04■□□□□ 0.16
AC009055.1-201ENST00000562656 EAF2Q96CJ1 260 aaPredicted RBP16.04■□□□□ 0.16
AC009055.1-201ENST00000562656 ZNF333Q96JL9 665 aa16.04■□□□□ 0.16
AC009055.1-201ENST00000562656 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.04■□□□□ 0.16
AC009055.1-201ENST00000562656 HERC5Q9UII4 1024 aaKnown RBP16.04■□□□□ 0.16
AC009055.1-201ENST00000562656 PTCH2Q9Y6C5 1203 aa16.04■□□□□ 0.16
AC009055.1-201ENST00000562656 PTPRFP10586 1907 aa16.04■□□□□ 0.16
AC009055.1-201ENST00000562656 TNRC18O15417 2968 aaPredicted RBP16.03■□□□□ 0.16
AC009055.1-201ENST00000562656 HOXD10P28358 340 aa16.03■□□□□ 0.16
AC009055.1-201ENST00000562656 SLC9C1Q4G0N8 1177 aa16.03■□□□□ 0.16
AC009055.1-201ENST00000562656 PANK1Q8TE04 598 aa16.03■□□□□ 0.16
AC009055.1-201ENST00000562656 PI4KBQ9UBF8 816 aa16.03■□□□□ 0.16
AC009055.1-201ENST00000562656 CPA4Q9UI42 421 aa16.03■□□□□ 0.16
AC009055.1-201ENST00000562656 BCRP11274 1271 aa16.02■□□□□ 0.16
AC009055.1-201ENST00000562656 ZAP70P43403 619 aa16.02■□□□□ 0.16
AC009055.1-201ENST00000562656 CERS3Q8IU89 383 aa16.02■□□□□ 0.16
AC009055.1-201ENST00000562656 RPAP2Q8IXW5 612 aaPredicted RBP16.02■□□□□ 0.16
AC009055.1-201ENST00000562656 SH3RF3Q8TEJ3 882 aaPredicted RBP16.02■□□□□ 0.16
AC009055.1-201ENST00000562656 TMEM106CQ9BVX2 250 aa16.02■□□□□ 0.16
AC009055.1-201ENST00000562656 ARHGAP39Q9C0H5 1083 aa16.02■□□□□ 0.16
AC009055.1-201ENST00000562656 CCDC8Q9H0W5 538 aaPredicted RBP16.02■□□□□ 0.16
AC009055.1-201ENST00000562656 AATFQ9NY61 560 aaKnown RBP eCLIP16.02■□□□□ 0.16
AC009055.1-201ENST00000562656 HTTP42858 3142 aa16.01■□□□□ 0.15
AC009055.1-201ENST00000562656 FOCADQ5VW36 1801 aa16.01■□□□□ 0.15
AC009055.1-201ENST00000562656 POTEFA5A3E0 1075 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms