RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 CSRNP1Q96S65 589 aa18.73■□□□□ 0.59
CCNDBP1-203ENST00000562553 ATRNL1Q5VV63 1379 aa18.72■□□□□ 0.59
CCNDBP1-203ENST00000562553 ATP5JP18859 108 aa18.72■□□□□ 0.59
CCNDBP1-203ENST00000562553 SPRYD7Q5W111 196 aa18.72■□□□□ 0.59
CCNDBP1-203ENST00000562553 TEX11Q8IYF3 940 aa18.72■□□□□ 0.59
CCNDBP1-203ENST00000562553 MAGEB6Q8N7X4 407 aa18.72■□□□□ 0.59
CCNDBP1-203ENST00000562553 WNK4Q96J92 1243 aa18.72■□□□□ 0.59
CCNDBP1-203ENST00000562553 DDTLA6NHG4 134 aaPredicted RBP18.71■□□□□ 0.59
CCNDBP1-203ENST00000562553 UNCXA6NJT0 531 aa18.71■□□□□ 0.59
CCNDBP1-203ENST00000562553 IGSF3O75054 1194 aa18.71■□□□□ 0.59
CCNDBP1-203ENST00000562553 SLURP2P0DP57 97 aa18.71■□□□□ 0.59
CCNDBP1-203ENST00000562553 GJA5P36382 358 aa18.71■□□□□ 0.59
CCNDBP1-203ENST00000562553 DYNLL1P63167 89 aaKnown RBP18.71■□□□□ 0.59
CCNDBP1-203ENST00000562553 MAP3K9P80192 1104 aa18.71■□□□□ 0.59
CCNDBP1-203ENST00000562553 HDAC1Q13547 482 aaPredicted RBP18.71■□□□□ 0.59
CCNDBP1-203ENST00000562553 VGLL4Q14135 290 aa18.71■□□□□ 0.59
CCNDBP1-203ENST00000562553 TSHZ3Q63HK5 1081 aa18.71■□□□□ 0.59
CCNDBP1-203ENST00000562553 DCAF15Q66K64 600 aa18.71■□□□□ 0.59
CCNDBP1-203ENST00000562553 WRNIP1Q96S55 665 aa18.71■□□□□ 0.59
CCNDBP1-203ENST00000562553 ELP3Q9H9T3 547 aa18.71■□□□□ 0.59
CCNDBP1-203ENST00000562553 SIPA1L1O43166 1804 aa18.71■□□□□ 0.59
CCNDBP1-203ENST00000562553 MAP4K4O95819 1239 aaPredicted RBP18.7■□□□□ 0.58
CCNDBP1-203ENST00000562553 PPP4CP60510 307 aa18.7■□□□□ 0.58
CCNDBP1-203ENST00000562553 IRX6P78412 446 aaPredicted RBP18.7■□□□□ 0.58
CCNDBP1-203ENST00000562553 MAP3K12Q12852 859 aa18.7■□□□□ 0.58
CCNDBP1-203ENST00000562553 TTF1Q15361 905 aaPredicted RBP18.7■□□□□ 0.58
CCNDBP1-203ENST00000562553 ZSCAN29Q8IWY8 852 aaPredicted RBP18.7■□□□□ 0.58
CCNDBP1-203ENST00000562553 MIGA1Q8NAN2 632 aa18.7■□□□□ 0.58
CCNDBP1-203ENST00000562553 CNKSR2Q8WXI2 1034 aa18.7■□□□□ 0.58
CCNDBP1-203ENST00000562553 HOOK2Q96ED9 719 aa18.7■□□□□ 0.58
CCNDBP1-203ENST00000562553 HAUS7Q99871 368 aa18.7■□□□□ 0.58
CCNDBP1-203ENST00000562553 NOL10Q9BSC4 688 aaKnown RBP18.7■□□□□ 0.58
CCNDBP1-203ENST00000562553 ZNF341Q9BYN7 854 aa18.7■□□□□ 0.58
CCNDBP1-203ENST00000562553 PAG1Q9NWQ8 432 aa18.7■□□□□ 0.58
CCNDBP1-203ENST00000562553 RNF186Q9NXI6 227 aa18.7■□□□□ 0.58
CCNDBP1-203ENST00000562553 NPM3O75607 178 aaKnown RBP18.69■□□□□ 0.58
CCNDBP1-203ENST00000562553 BAG3O95817 575 aa18.69■□□□□ 0.58
CCNDBP1-203ENST00000562553 AAMPQ13685 434 aa18.69■□□□□ 0.58
CCNDBP1-203ENST00000562553 OTUD7AQ8TE49 926 aaPredicted RBP18.69■□□□□ 0.58
CCNDBP1-203ENST00000562553 ZKSCAN4Q969J2 545 aaPredicted RBP18.69■□□□□ 0.58
CCNDBP1-203ENST00000562553 MCOLN1Q9GZU1 580 aa18.69■□□□□ 0.58
CCNDBP1-203ENST00000562553 ECHDC1Q9NTX5 307 aa18.69■□□□□ 0.58
CCNDBP1-203ENST00000562553 SNCAIPQ9Y6H5 919 aa18.69■□□□□ 0.58
CCNDBP1-203ENST00000562553 MYH1P12882 1939 aa18.68■□□□□ 0.58
CCNDBP1-203ENST00000562553 PDE6AP16499 860 aa18.68■□□□□ 0.58
CCNDBP1-203ENST00000562553 INPP5BP32019 993 aa18.68■□□□□ 0.58
CCNDBP1-203ENST00000562553 OPTNQ96CV9 577 aa18.68■□□□□ 0.58
CCNDBP1-203ENST00000562553 OSBPL5Q9H0X9 879 aaPredicted RBP18.68■□□□□ 0.58
CCNDBP1-203ENST00000562553 CSADQ9Y600 493 aa18.68■□□□□ 0.58
CCNDBP1-203ENST00000562553 COL2A1P02458 1487 aaPredicted RBP18.68■□□□□ 0.58
CCNDBP1-203ENST00000562553 ZBTB48P10074 688 aaPredicted RBP18.67■□□□□ 0.58
CCNDBP1-203ENST00000562553 PLCG2P16885 1265 aa18.67■□□□□ 0.58
CCNDBP1-203ENST00000562553 RGS19P49795 217 aa18.67■□□□□ 0.58
CCNDBP1-203ENST00000562553 SLFNL1Q499Z3 407 aa18.67■□□□□ 0.58
CCNDBP1-203ENST00000562553 SLC9C2Q5TAH2 1124 aa18.67■□□□□ 0.58
CCNDBP1-203ENST00000562553 MAPKAPK5Q8IW41 473 aa18.67■□□□□ 0.58
CCNDBP1-203ENST00000562553 TGFBRAP1Q8WUH2 860 aa18.67■□□□□ 0.58
CCNDBP1-203ENST00000562553 ZNF112Q9UJU3 913 aa18.67■□□□□ 0.58
CCNDBP1-203ENST00000562553 TCRBV5S4A2TA0A5A2 114 aa18.66■□□□□ 0.58
CCNDBP1-203ENST00000562553 TRPA1O75762 1119 aa18.66■□□□□ 0.58
CCNDBP1-203ENST00000562553 CHGBP05060 677 aa18.66■□□□□ 0.58
CCNDBP1-203ENST00000562553 ANKRD45Q5TZF3 282 aa18.66■□□□□ 0.58
CCNDBP1-203ENST00000562553 GCC1Q96CN9 775 aa18.66■□□□□ 0.58
CCNDBP1-203ENST00000562553 DOCK1Q14185 1865 aa18.66■□□□□ 0.58
CCNDBP1-203ENST00000562553 FLT1P17948 1338 aa18.66■□□□□ 0.58
CCNDBP1-203ENST00000562553 ZNF532Q9HCE3 1301 aa18.66■□□□□ 0.58
CCNDBP1-203ENST00000562553 NAV1Q8NEY1 1877 aa18.65■□□□□ 0.58
CCNDBP1-203ENST00000562553 CCDC85CA6NKD9 419 aa18.65■□□□□ 0.58
CCNDBP1-203ENST00000562553 FAM196BA6NMK8 535 aa18.65■□□□□ 0.58
CCNDBP1-203ENST00000562553 IGHDP01880 384 aa18.65■□□□□ 0.58
CCNDBP1-203ENST00000562553 TM4SF4P48230 202 aa18.65■□□□□ 0.58
CCNDBP1-203ENST00000562553 DGKZQ13574 1117 aa18.65■□□□□ 0.58
CCNDBP1-203ENST00000562553 OTUD5Q96G74 571 aa18.65■□□□□ 0.58
CCNDBP1-203ENST00000562553 GPATCH3Q96I76 525 aa18.65■□□□□ 0.58
CCNDBP1-203ENST00000562553 RIOK1Q9BRS2 568 aaKnown RBP18.65■□□□□ 0.58
CCNDBP1-203ENST00000562553 DDX60LQ5H9U9 1706 aaKnown RBP18.65■□□□□ 0.58
CCNDBP1-203ENST00000562553 MANSC4A6NHS7 340 aaPredicted RBP18.64■□□□□ 0.57
CCNDBP1-203ENST00000562553 SPDYE5A6NIY4 337 aa18.64■□□□□ 0.57
CCNDBP1-203ENST00000562553 PHF20L1A8MW92 1017 aa18.64■□□□□ 0.57
CCNDBP1-203ENST00000562553 ADD2P35612 726 aa18.64■□□□□ 0.57
CCNDBP1-203ENST00000562553 MAP3K10Q02779 954 aa18.64■□□□□ 0.57
CCNDBP1-203ENST00000562553 SREBF2Q12772 1141 aa18.64■□□□□ 0.57
CCNDBP1-203ENST00000562553 TMED8Q6PL24 325 aaPredicted RBP18.64■□□□□ 0.57
CCNDBP1-203ENST00000562553 ATAD5Q96QE3 1844 aa18.64■□□□□ 0.57
CCNDBP1-203ENST00000562553 SALL3Q9BXA9 1300 aa18.64■□□□□ 0.57
CCNDBP1-203ENST00000562553 NOL9Q5SY16 702 aaKnown RBP18.63■□□□□ 0.57
CCNDBP1-203ENST00000562553 PI4K2BQ8TCG2 481 aa18.63■□□□□ 0.57
CCNDBP1-203ENST00000562553 RWDD1Q9H446 243 aaPredicted RBP18.63■□□□□ 0.57
CCNDBP1-203ENST00000562553 SAP30BPQ9UHR5 308 aaKnown RBP18.63■□□□□ 0.57
CCNDBP1-203ENST00000562553 PHIPQ8WWQ0 1821 aa18.63■□□□□ 0.57
CCNDBP1-203ENST00000562553 MAGEB6P1A0A0J9YX57 407 aa18.62■□□□□ 0.57
CCNDBP1-203ENST00000562553 IGF2BP3O00425 579 aaKnown RBP eCLIP18.62■□□□□ 0.57
CCNDBP1-203ENST00000562553 SLC4A8Q2Y0W8 1093 aa18.62■□□□□ 0.57
CCNDBP1-203ENST00000562553 ERO1BQ86YB8 467 aa18.62■□□□□ 0.57
CCNDBP1-203ENST00000562553 SMC5Q8IY18 1101 aa18.62■□□□□ 0.57
CCNDBP1-203ENST00000562553 LCORLQ8N3X6 602 aa18.62■□□□□ 0.57
CCNDBP1-203ENST00000562553 MS4A4AQ96JQ5 239 aa18.62■□□□□ 0.57
CCNDBP1-203ENST00000562553 PALD1Q9ULE6 856 aa18.62■□□□□ 0.57
CCNDBP1-203ENST00000562553 TTC41PQ6P2S7 1318 aa18.62■□□□□ 0.57
CCNDBP1-203ENST00000562553 TBC1D12O60347 775 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms