RNA–Protein interactions for RNA: ENST00000562474.1

TSC2-218, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 589 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-218ENST00000562474 TTC41PQ6P2S7 1318 aa13.6□□□□□ -0.23
TSC2-218ENST00000562474 PTPRFP10586 1907 aa13.59□□□□□ -0.23
TSC2-218ENST00000562474 TCRBV5S4A2TA0A5A2 114 aa13.59□□□□□ -0.23
TSC2-218ENST00000562474 ADD2P35612 726 aa13.59□□□□□ -0.23
TSC2-218ENST00000562474 EVX2Q03828 476 aa13.59□□□□□ -0.23
TSC2-218ENST00000562474 PLEKHM2Q8IWE5 1019 aa13.59□□□□□ -0.23
TSC2-218ENST00000562474 LCORLQ8N3X6 602 aa13.59□□□□□ -0.23
TSC2-218ENST00000562474 CAPNS2Q96L46 248 aa13.59□□□□□ -0.23
TSC2-218ENST00000562474 ARMT1Q9H993 441 aa13.59□□□□□ -0.23
TSC2-218ENST00000562474 PPP2R3BQ9Y5P8 575 aa13.59□□□□□ -0.23
TSC2-218ENST00000562474 THSD7BQ9C0I4 1608 aa13.59□□□□□ -0.23
TSC2-218ENST00000562474 PHIPQ8WWQ0 1821 aa13.59□□□□□ -0.23
TSC2-218ENST00000562474 MAGEB6P1A0A0J9YX57 407 aa13.58□□□□□ -0.24
TSC2-218ENST00000562474 RASSF10A6NK89 507 aa13.58□□□□□ -0.24
TSC2-218ENST00000562474 ERC2O15083 957 aa13.58□□□□□ -0.24
TSC2-218ENST00000562474 PRKAB2O43741 272 aa13.58□□□□□ -0.24
TSC2-218ENST00000562474 USP2O75604 605 aaPredicted RBP13.58□□□□□ -0.24
TSC2-218ENST00000562474 GLRX3O76003 335 aaKnown RBP13.58□□□□□ -0.24
TSC2-218ENST00000562474 MBD4O95243 580 aa13.58□□□□□ -0.24
TSC2-218ENST00000562474 FAM83AQ86UY5 434 aa13.58□□□□□ -0.24
TSC2-218ENST00000562474 FAM151AQ8WW52 585 aa13.58□□□□□ -0.24
TSC2-218ENST00000562474 FSD1Q9BTV5 496 aa13.58□□□□□ -0.24
TSC2-218ENST00000562474 BAG3O95817 575 aa13.57□□□□□ -0.24
TSC2-218ENST00000562474 ZNF157P51786 506 aaPredicted RBP13.57□□□□□ -0.24
TSC2-218ENST00000562474 SUPT20HL1Q3ZLR7 823 aa13.57□□□□□ -0.24
TSC2-218ENST00000562474 FKBP1CQ5VVH2 108 aa13.57□□□□□ -0.24
TSC2-218ENST00000562474 RGMBQ6NW40 437 aa13.57□□□□□ -0.24
TSC2-218ENST00000562474 KBTBD3Q8NAB2 608 aa13.57□□□□□ -0.24
TSC2-218ENST00000562474 SDR42E1Q8WUS8 393 aa13.57□□□□□ -0.24
TSC2-218ENST00000562474 CNKSR2Q8WXI2 1034 aa13.57□□□□□ -0.24
TSC2-218ENST00000562474 SEC62Q99442 399 aaKnown RBP13.57□□□□□ -0.24
TSC2-218ENST00000562474 RIOK1Q9BRS2 568 aaKnown RBP13.57□□□□□ -0.24
TSC2-218ENST00000562474 IDI2Q9BXS1 227 aa13.57□□□□□ -0.24
TSC2-218ENST00000562474 PUS7LQ9H0K6 701 aaKnown RBP13.57□□□□□ -0.24
TSC2-218ENST00000562474 OSBPL5Q9H0X9 879 aaPredicted RBP13.57□□□□□ -0.24
TSC2-218ENST00000562474 STAP2Q9UGK3 403 aa13.57□□□□□ -0.24
TSC2-218ENST00000562474 FLT1P17948 1338 aa13.57□□□□□ -0.24
TSC2-218ENST00000562474 WDR33Q9C0J8 1336 aaKnown RBP13.57□□□□□ -0.24
TSC2-218ENST00000562474 RPAP1Q9BWH6 1393 aaPredicted RBP13.57□□□□□ -0.24
TSC2-218ENST00000562474 TRIM6-TRIM34B2RNG4 842 aa13.56□□□□□ -0.24
TSC2-218ENST00000562474 M0R2C6 588 aa13.56□□□□□ -0.24
TSC2-218ENST00000562474 INPP5BP32019 993 aa13.56□□□□□ -0.24
TSC2-218ENST00000562474 USP5P45974 858 aa13.56□□□□□ -0.24
TSC2-218ENST00000562474 PPP4CP60510 307 aa13.56□□□□□ -0.24
TSC2-218ENST00000562474 ARMC9Q7Z3E5 817 aa13.56□□□□□ -0.24
TSC2-218ENST00000562474 RASAL3Q86YV0 1011 aa13.56□□□□□ -0.24
TSC2-218ENST00000562474 RILPL2Q969X0 211 aa13.56□□□□□ -0.24
TSC2-218ENST00000562474 CSRNP1Q96S65 589 aa13.56□□□□□ -0.24
TSC2-218ENST00000562474 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.56□□□□□ -0.243e-12■■■■■ 38.5
TSC2-218ENST00000562474 ELP3Q9H9T3 547 aa13.56□□□□□ -0.24
TSC2-218ENST00000562474 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.56□□□□□ -0.24
TSC2-218ENST00000562474 PALD1Q9ULE6 856 aa13.56□□□□□ -0.24
TSC2-218ENST00000562474 CASP8AP2Q9UKL3 1982 aa13.55□□□□□ -0.24
TSC2-218ENST00000562474 SMIM22K7EJ46 135 aa13.55□□□□□ -0.24
TSC2-218ENST00000562474 PPP1R12BO60237 982 aaPredicted RBP13.55□□□□□ -0.24
TSC2-218ENST00000562474 ENTPD3O75355 529 aa13.55□□□□□ -0.24
TSC2-218ENST00000562474 CYP2D6P10635 497 aa13.55□□□□□ -0.24
TSC2-218ENST00000562474 CCDC129Q6ZRS4 1044 aa13.55□□□□□ -0.24
TSC2-218ENST00000562474 CCDC84Q86UT8 332 aaPredicted RBP13.55□□□□□ -0.24
TSC2-218ENST00000562474 ZKSCAN4Q969J2 545 aaPredicted RBP13.55□□□□□ -0.24
TSC2-218ENST00000562474 OSBP2Q969R2 916 aa13.55□□□□□ -0.24
TSC2-218ENST00000562474 CCDC136Q96JN2 1154 aa13.55□□□□□ -0.24
TSC2-218ENST00000562474 WRNIP1Q96S55 665 aa13.55□□□□□ -0.24
TSC2-218ENST00000562474 ATRNL1Q5VV63 1379 aa13.55□□□□□ -0.24
TSC2-218ENST00000562474 CEP350Q5VT06 3117 aa13.54□□□□□ -0.24
TSC2-218ENST00000562474 CYP2D7A0A087X1C5 515 aa13.54□□□□□ -0.24
TSC2-218ENST00000562474 FAM155AB1AL88 458 aaPredicted RBP13.54□□□□□ -0.24
TSC2-218ENST00000562474 RNF113AO15541 343 aaKnown RBP13.54□□□□□ -0.24
TSC2-218ENST00000562474 SHROOM1Q2M3G4 852 aaPredicted RBP13.54□□□□□ -0.24
TSC2-218ENST00000562474 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.54□□□□□ -0.24
TSC2-218ENST00000562474 SLC10A3P09131 477 aa13.53□□□□□ -0.24
TSC2-218ENST00000562474 GSPT1P15170 499 aaKnown RBP13.53□□□□□ -0.24
TSC2-218ENST00000562474 PLCG2P16885 1265 aa13.53□□□□□ -0.24
TSC2-218ENST00000562474 GJA5P36382 358 aa13.53□□□□□ -0.24
TSC2-218ENST00000562474 IREB2P48200 963 aaKnown RBP13.53□□□□□ -0.24
TSC2-218ENST00000562474 FKBP1BP68106 108 aa13.53□□□□□ -0.24
TSC2-218ENST00000562474 VGLL4Q14135 290 aa13.53□□□□□ -0.24
TSC2-218ENST00000562474 UBE3CQ15386 1083 aa13.53□□□□□ -0.24
TSC2-218ENST00000562474 LDLRAD1Q5T700 205 aa13.53□□□□□ -0.24
TSC2-218ENST00000562474 AIDAQ96BJ3 306 aa13.53□□□□□ -0.24
TSC2-218ENST00000562474 ZNF341Q9BYN7 854 aa13.53□□□□□ -0.24
TSC2-218ENST00000562474 ECE1P42892 770 aa13.52□□□□□ -0.25
TSC2-218ENST00000562474 MAP3K9P80192 1104 aa13.52□□□□□ -0.25
TSC2-218ENST00000562474 RRP1BQ14684 758 aaKnown RBP13.52□□□□□ -0.25
TSC2-218ENST00000562474 MAP3K11Q16584 847 aa13.52□□□□□ -0.25
TSC2-218ENST00000562474 DCAF15Q66K64 600 aa13.52□□□□□ -0.25
TSC2-218ENST00000562474 ZSCAN25Q6NSZ9 544 aa13.52□□□□□ -0.25
TSC2-218ENST00000562474 STK11IPQ8N1F8 1099 aa13.52□□□□□ -0.25
TSC2-218ENST00000562474 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.52□□□□□ -0.25
TSC2-218ENST00000562474 APPBP2Q92624 585 aa13.52□□□□□ -0.25
TSC2-218ENST00000562474 FAM227BQ96M60 508 aa13.52□□□□□ -0.25
TSC2-218ENST00000562474 CRNKL1Q9BZJ0 848 aaKnown RBP13.52□□□□□ -0.25
TSC2-218ENST00000562474 DNAJC18Q9H819 358 aa13.52□□□□□ -0.25
TSC2-218ENST00000562474 TSKSQ9UJT2 592 aa13.52□□□□□ -0.25
TSC2-218ENST00000562474 SNCAIPQ9Y6H5 919 aa13.52□□□□□ -0.25
TSC2-218ENST00000562474 SLC4A4Q9Y6R1 1079 aa13.52□□□□□ -0.25
TSC2-218ENST00000562474 COL2A1P02458 1487 aaPredicted RBP13.51□□□□□ -0.25
TSC2-218ENST00000562474 A0A0D9SFI3 127 aa13.51□□□□□ -0.25
TSC2-218ENST00000562474 GPAA1O43292 621 aa13.51□□□□□ -0.25
TSC2-218ENST00000562474 KIF23Q02241 960 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms