RNA–Protein interactions for RNA: ENST00000562083.1

CCP110-205, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-205ENST00000562083 MAP3K12Q12852 859 aa16.44■□□□□ 0.22
CCP110-205ENST00000562083 NFIAQ12857 509 aa16.44■□□□□ 0.22
CCP110-205ENST00000562083 EPHA10Q5JZY3 1008 aa16.44■□□□□ 0.22
CCP110-205ENST00000562083 CCDC30Q5VVM6 783 aa16.44■□□□□ 0.22
CCP110-205ENST00000562083 FASTKD5Q7L8L6 764 aaKnown RBP16.44■□□□□ 0.22
CCP110-205ENST00000562083 CCDC84Q86UT8 332 aaPredicted RBP16.44■□□□□ 0.22
CCP110-205ENST00000562083 ZFPM1Q8IX07 1006 aa16.44■□□□□ 0.22
CCP110-205ENST00000562083 AFG3L2Q9Y4W6 797 aa16.44■□□□□ 0.22
CCP110-205ENST00000562083 XIRP2A4UGR9 3374 aa16.44■□□□□ 0.22
CCP110-205ENST00000562083 MAST2Q6P0Q8 1798 aa16.43■□□□□ 0.22
CCP110-205ENST00000562083 TREML2Q5T2D2 321 aa16.43■□□□□ 0.22
CCP110-205ENST00000562083 MAP3K21Q5TCX8 1036 aa16.43■□□□□ 0.22
CCP110-205ENST00000562083 LDHAL6AQ6ZMR3 332 aa16.43■□□□□ 0.22
CCP110-205ENST00000562083 FAM151AQ8WW52 585 aa16.43■□□□□ 0.22
CCP110-205ENST00000562083 PHF20L1A8MW92 1017 aa16.42■□□□□ 0.22
CCP110-205ENST00000562083 PRKAR2AP13861 404 aaKnown RBP16.42■□□□□ 0.22
CCP110-205ENST00000562083 PTPRAP18433 802 aa16.42■□□□□ 0.22
CCP110-205ENST00000562083 RUNDC1Q96C34 613 aa16.42■□□□□ 0.22
CCP110-205ENST00000562083 LBHD1Q9BQE6 289 aaPredicted RBP16.42■□□□□ 0.22
CCP110-205ENST00000562083 SLC45A1Q9Y2W3 748 aa16.42■□□□□ 0.22
CCP110-205ENST00000562083 UBE4AQ14139 1066 aa16.41■□□□□ 0.22
CCP110-205ENST00000562083 FAM110CQ1W6H9 321 aa16.41■□□□□ 0.22
CCP110-205ENST00000562083 LHX8Q68G74 356 aa16.41■□□□□ 0.22
CCP110-205ENST00000562083 LMBR1LQ6UX01 489 aa16.41■□□□□ 0.22
CCP110-205ENST00000562083 FBXO33Q7Z6M2 555 aa16.41■□□□□ 0.22
CCP110-205ENST00000562083 CCER1Q8TC90 406 aaPredicted RBP16.41■□□□□ 0.22
CCP110-205ENST00000562083 PUS3Q9BZE2 481 aaKnown RBP16.41■□□□□ 0.22
CCP110-205ENST00000562083 CNNM1Q9NRU3 951 aa16.41■□□□□ 0.22
CCP110-205ENST00000562083 FAM198AQ9UFP1 575 aa16.41■□□□□ 0.22
CCP110-205ENST00000562083 FRMPD3Q5JV73 1810 aa16.4■□□□□ 0.22
CCP110-205ENST00000562083 ATRNL1Q5VV63 1379 aa16.4■□□□□ 0.22
CCP110-205ENST00000562083 PEX10O60683 326 aa16.4■□□□□ 0.22
CCP110-205ENST00000562083 CYP2B6P20813 491 aa16.4■□□□□ 0.22
CCP110-205ENST00000562083 IFT57Q9NWB7 429 aa16.4■□□□□ 0.22
CCP110-205ENST00000562083 TRIM75PA6NK02 468 aa16.39■□□□□ 0.21
CCP110-205ENST00000562083 CCND3P30281 292 aaPredicted RBP16.39■□□□□ 0.21
CCP110-205ENST00000562083 CDC42EP5Q6NZY7 148 aa16.39■□□□□ 0.21
CCP110-205ENST00000562083 SCYL3Q8IZE3 742 aa16.39■□□□□ 0.21
CCP110-205ENST00000562083 MRIQ9BWK5 157 aa16.39■□□□□ 0.21
CCP110-205ENST00000562083 DOCK2Q92608 1830 aa16.38■□□□□ 0.21
CCP110-205ENST00000562083 CACNB2Q08289 660 aaPredicted RBP16.38■□□□□ 0.21
CCP110-205ENST00000562083 HHIPL2Q6UWX4 724 aa16.38■□□□□ 0.21
CCP110-205ENST00000562083 AGTPBP1Q9UPW5 1226 aa16.38■□□□□ 0.21
CCP110-205ENST00000562083 MYO9BQ13459 2157 aa16.38■□□□□ 0.21
CCP110-205ENST00000562083 CHD9Q3L8U1 2897 aa16.38■□□□□ 0.21
CCP110-205ENST00000562083 DOCK1Q14185 1865 aa16.37■□□□□ 0.21
CCP110-205ENST00000562083 ATN1P54259 1190 aaPredicted RBP16.37■□□□□ 0.21
CCP110-205ENST00000562083 GNAI1P63096 354 aa16.37■□□□□ 0.21
CCP110-205ENST00000562083 GRIN2CQ14957 1233 aa16.37■□□□□ 0.21
CCP110-205ENST00000562083 TAF7LQ5H9L4 462 aa16.37■□□□□ 0.21
CCP110-205ENST00000562083 TBC1D22AQ8WUA7 517 aa16.37■□□□□ 0.21
CCP110-205ENST00000562083 SENP6Q9GZR1 1112 aaPredicted RBP16.37■□□□□ 0.21
CCP110-205ENST00000562083 MYH16Q9H6N6 1097 aa16.37■□□□□ 0.21
CCP110-205ENST00000562083 PICK1Q9NRD5 415 aa16.37■□□□□ 0.21
CCP110-205ENST00000562083 SMAD3P84022 425 aaKnown RBP16.36■□□□□ 0.21
CCP110-205ENST00000562083 DIXDC1Q155Q3 683 aa16.36■□□□□ 0.21
CCP110-205ENST00000562083 CCL14Q16627 93 aa16.36■□□□□ 0.21
CCP110-205ENST00000562083 CCDC57Q2TAC2 916 aa16.36■□□□□ 0.21
CCP110-205ENST00000562083 DAGLAQ9Y4D2 1042 aa16.36■□□□□ 0.21
CCP110-205ENST00000562083 FRAT2O75474 233 aaPredicted RBP16.35■□□□□ 0.21
CCP110-205ENST00000562083 SH3BP5LQ7L8J4 393 aa16.35■□□□□ 0.21
CCP110-205ENST00000562083 VPS37DQ86XT2 251 aa16.35■□□□□ 0.21
CCP110-205ENST00000562083 LINS1Q8NG48 757 aa16.35■□□□□ 0.21
CCP110-205ENST00000562083 ADAMTS8Q9UP79 889 aa16.35■□□□□ 0.21
CCP110-205ENST00000562083 TCF20Q9UGU0 1960 aaKnown RBP16.35■□□□□ 0.21
CCP110-205ENST00000562083 PIEZO1Q92508 2521 aa16.35■□□□□ 0.21
CCP110-205ENST00000562083 SLC4A2P04920 1241 aa16.34■□□□□ 0.21
CCP110-205ENST00000562083 ADAMTS19Q8TE59 1207 aa16.34■□□□□ 0.21
CCP110-205ENST00000562083 DNAAF4Q8WXU2 420 aa16.34■□□□□ 0.21
CCP110-205ENST00000562083 CHD7Q9P2D1 2997 aa16.34■□□□□ 0.21
CCP110-205ENST00000562083 LOC285556D6RIA3 1793 aa16.33■□□□□ 0.21
CCP110-205ENST00000562083 RTP1P59025 263 aa16.33■□□□□ 0.2
CCP110-205ENST00000562083 PPM1EQ8WY54 764 aa16.33■□□□□ 0.2
CCP110-205ENST00000562083 BADQ92934 168 aa16.33■□□□□ 0.2
CCP110-205ENST00000562083 STK31Q9BXU1 1019 aa16.33■□□□□ 0.2
CCP110-205ENST00000562083 RLFQ13129 1914 aa16.33■□□□□ 0.2
CCP110-205ENST00000562083 MAST3O60307 1309 aa16.32■□□□□ 0.2
CCP110-205ENST00000562083 FLIIQ13045 1269 aa16.32■□□□□ 0.2
CCP110-205ENST00000562083 TSR2Q969E8 191 aaKnown RBP16.32■□□□□ 0.2
CCP110-205ENST00000562083 NECAB3Q96P71 396 aaPredicted RBP16.32■□□□□ 0.2
CCP110-205ENST00000562083 SYNGAP1Q96PV0 1343 aa16.32■□□□□ 0.2
CCP110-205ENST00000562083 ASCC2Q9H1I8 757 aaPredicted RBP16.32■□□□□ 0.2
CCP110-205ENST00000562083 USP40Q9NVE5 1235 aa16.32■□□□□ 0.2
CCP110-205ENST00000562083 MYH13Q9UKX3 1938 aa16.31■□□□□ 0.2
CCP110-205ENST00000562083 GCLCP48506 637 aaPredicted RBP16.31■□□□□ 0.2
CCP110-205ENST00000562083 FKBP5Q13451 457 aaPredicted RBP16.31■□□□□ 0.2
CCP110-205ENST00000562083 ASB2Q96Q27 587 aa16.31■□□□□ 0.2
CCP110-205ENST00000562083 UHRF1Q96T88 793 aaPredicted RBP16.31■□□□□ 0.2
CCP110-205ENST00000562083 PNMA3Q9UL41 463 aa16.31■□□□□ 0.2
CCP110-205ENST00000562083 DDTLA6NHG4 134 aaPredicted RBP16.3■□□□□ 0.2
CCP110-205ENST00000562083 F6X3S4 739 aa16.3■□□□□ 0.2
CCP110-205ENST00000562083 ZKSCAN1P17029 563 aaPredicted RBP16.3■□□□□ 0.2
CCP110-205ENST00000562083 RGS3P49796 1198 aa16.3■□□□□ 0.2
CCP110-205ENST00000562083 MAP3K10Q02779 954 aa16.3■□□□□ 0.2
CCP110-205ENST00000562083 LRRC24Q50LG9 513 aa16.3■□□□□ 0.2
CCP110-205ENST00000562083 SH3RF1Q7Z6J0 888 aa16.3■□□□□ 0.2
CCP110-205ENST00000562083 USP6NLQ92738 828 aa16.3■□□□□ 0.2
CCP110-205ENST00000562083 TXNRD2Q9NNW7 524 aa16.3■□□□□ 0.2
CCP110-205ENST00000562083 PRKAG2Q9UGJ0 569 aa16.3■□□□□ 0.2
CCP110-205ENST00000562083 ATP11BQ9Y2G3 1177 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms