RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 CDCA7LQ96GN5 454 aa14.7□□□□□ -0.06
CARMIL3-204ENST00000561354 API5Q9BZZ5 524 aaKnown RBP14.7□□□□□ -0.06
CARMIL3-204ENST00000561354 PICK1Q9NRD5 415 aa14.7□□□□□ -0.06
CARMIL3-204ENST00000561354 NOB1Q9ULX3 412 aaKnown RBP14.7□□□□□ -0.06
CARMIL3-204ENST00000561354 LRRFIP2Q9Y608 721 aaKnown RBP14.7□□□□□ -0.06
CARMIL3-204ENST00000561354 ZHX2Q9Y6X8 837 aa14.7□□□□□ -0.06
CARMIL3-204ENST00000561354 RFX7Q2KHR2 1363 aa14.7□□□□□ -0.06
CARMIL3-204ENST00000561354 GJB1P08034 283 aa14.69□□□□□ -0.06
CARMIL3-204ENST00000561354 CYP2C8P10632 490 aa14.69□□□□□ -0.06
CARMIL3-204ENST00000561354 PTPRAP18433 802 aa14.69□□□□□ -0.06
CARMIL3-204ENST00000561354 GJA8P48165 433 aa14.69□□□□□ -0.06
CARMIL3-204ENST00000561354 FCGRTP55899 365 aa14.69□□□□□ -0.06
CARMIL3-204ENST00000561354 PA2G4Q9UQ80 394 aaKnown RBP14.69□□□□□ -0.06
CARMIL3-204ENST00000561354 SLC45A1Q9Y2W3 748 aa14.69□□□□□ -0.06
CARMIL3-204ENST00000561354 AFG3L2Q9Y4W6 797 aa14.69□□□□□ -0.06
CARMIL3-204ENST00000561354 CTNND1O60716 968 aaKnown RBP14.68□□□□□ -0.06
CARMIL3-204ENST00000561354 ADORA1P30542 326 aa14.68□□□□□ -0.06
CARMIL3-204ENST00000561354 UBXN2AP68543 259 aa14.68□□□□□ -0.06
CARMIL3-204ENST00000561354 RASGRF1Q13972 1273 aa14.68□□□□□ -0.06
CARMIL3-204ENST00000561354 SPTY2D1Q68D10 685 aaPredicted RBP14.68□□□□□ -0.06
CARMIL3-204ENST00000561354 SH3BP5LQ7L8J4 393 aa14.68□□□□□ -0.06
CARMIL3-204ENST00000561354 DZIP1Q86YF9 867 aaKnown RBP14.68□□□□□ -0.06
CARMIL3-204ENST00000561354 DOCK2Q92608 1830 aa14.68□□□□□ -0.06
CARMIL3-204ENST00000561354 MYH2Q9UKX2 1941 aa14.68□□□□□ -0.06
CARMIL3-204ENST00000561354 DDTLA6NHG4 134 aaPredicted RBP14.67□□□□□ -0.06
CARMIL3-204ENST00000561354 NPM3O75607 178 aaKnown RBP14.67□□□□□ -0.06
CARMIL3-204ENST00000561354 CCL5P13501 91 aa14.67□□□□□ -0.06
CARMIL3-204ENST00000561354 TIMM10P62072 90 aa14.67□□□□□ -0.06
CARMIL3-204ENST00000561354 PRKCZQ05513 592 aa14.67□□□□□ -0.06
CARMIL3-204ENST00000561354 UBE2Q1Q7Z7E8 422 aa14.67□□□□□ -0.06
CARMIL3-204ENST00000561354 ZSCAN29Q8IWY8 852 aaPredicted RBP14.67□□□□□ -0.06
CARMIL3-204ENST00000561354 SLAIN1Q8ND83 568 aa14.67□□□□□ -0.06
CARMIL3-204ENST00000561354 ABCF2Q9UG63 623 aa14.67□□□□□ -0.06
CARMIL3-204ENST00000561354 AKAP2Q9Y2D5 859 aa14.67□□□□□ -0.06
CARMIL3-204ENST00000561354 GPR75-ASB3A0A0A6YYF3 556 aa14.66□□□□□ -0.06
CARMIL3-204ENST00000561354 A0A1B0GUL7 405 aa14.66□□□□□ -0.06
CARMIL3-204ENST00000561354 TBC1D12O60347 775 aa14.66□□□□□ -0.06
CARMIL3-204ENST00000561354 BTDP43251 543 aa14.66□□□□□ -0.06
CARMIL3-204ENST00000561354 MEIS3Q99687 375 aa14.66□□□□□ -0.06
CARMIL3-204ENST00000561354 RNF208Q9H0X6 261 aa14.66□□□□□ -0.06
CARMIL3-204ENST00000561354 DDX4Q9NQI0 724 aaKnown RBP14.66□□□□□ -0.06
CARMIL3-204ENST00000561354 BIN2Q9UBW5 565 aaPredicted RBP14.66□□□□□ -0.06
CARMIL3-204ENST00000561354 MROH7-TTC4A0A0A0MT08 1334 aa14.66□□□□□ -0.06
CARMIL3-204ENST00000561354 CAPN2P17655 700 aa14.65□□□□□ -0.06
CARMIL3-204ENST00000561354 MTX1Q13505 466 aa14.65□□□□□ -0.06
CARMIL3-204ENST00000561354 MVPQ14764 893 aaKnown RBP14.65□□□□□ -0.06
CARMIL3-204ENST00000561354 GADL1Q6ZQY3 521 aa14.65□□□□□ -0.06
CARMIL3-204ENST00000561354 ERICH6Q7L0X2 663 aa14.65□□□□□ -0.06
CARMIL3-204ENST00000561354 PXYLP1Q8TE99 480 aa14.65□□□□□ -0.06
CARMIL3-204ENST00000561354 ARHGAP45Q92619 1136 aa14.65□□□□□ -0.06
CARMIL3-204ENST00000561354 DPF3Q92784 378 aa14.65□□□□□ -0.06
CARMIL3-204ENST00000561354 XAGE2Q96GT9 111 aa14.65□□□□□ -0.06
CARMIL3-204ENST00000561354 HTATIP2Q9BUP3 242 aa14.65□□□□□ -0.06
CARMIL3-204ENST00000561354 GABRQQ9UN88 632 aa14.65□□□□□ -0.06
CARMIL3-204ENST00000561354 MGAMO43451 1857 aa14.65□□□□□ -0.06
CARMIL3-204ENST00000561354 SRGAP3O43295 1099 aa14.64□□□□□ -0.07
CARMIL3-204ENST00000561354 MAP4K4O95819 1239 aaPredicted RBP14.64□□□□□ -0.07
CARMIL3-204ENST00000561354 GNAI3P08754 354 aa14.64□□□□□ -0.07
CARMIL3-204ENST00000561354 FLT3LGP49771 235 aa14.64□□□□□ -0.07
CARMIL3-204ENST00000561354 RHBDL3P58872 404 aa14.64□□□□□ -0.07
CARMIL3-204ENST00000561354 MECOMQ03112 1051 aa14.64□□□□□ -0.07
CARMIL3-204ENST00000561354 TFCP2Q12800 502 aa14.64□□□□□ -0.07
CARMIL3-204ENST00000561354 IRF5Q13568 498 aa14.64□□□□□ -0.07
CARMIL3-204ENST00000561354 SMCR8Q8TEV9 937 aaPredicted RBP14.64□□□□□ -0.07
CARMIL3-204ENST00000561354 U2AF1L4Q8WU68 220 aaKnown RBP14.64□□□□□ -0.07
CARMIL3-204ENST00000561354 DOCK1Q14185 1865 aa14.63□□□□□ -0.07
CARMIL3-204ENST00000561354 PTPRFP10586 1907 aa14.63□□□□□ -0.07
CARMIL3-204ENST00000561354 TRIM75PA6NK02 468 aa14.63□□□□□ -0.07
CARMIL3-204ENST00000561354 ADCY3O60266 1144 aa14.63□□□□□ -0.07
CARMIL3-204ENST00000561354 SGPL1O95470 568 aa14.63□□□□□ -0.07
CARMIL3-204ENST00000561354 SLURP2P0DP57 97 aa14.63□□□□□ -0.07
CARMIL3-204ENST00000561354 PICALMQ13492 652 aa14.63□□□□□ -0.07
CARMIL3-204ENST00000561354 ZNF384Q8TF68 577 aa14.63□□□□□ -0.07
CARMIL3-204ENST00000561354 UNC93B1Q9H1C4 597 aa14.63□□□□□ -0.07
CARMIL3-204ENST00000561354 AGTPBP1Q9UPW5 1226 aa14.63□□□□□ -0.07
CARMIL3-204ENST00000561354 PHIPQ8WWQ0 1821 aa14.63□□□□□ -0.07
CARMIL3-204ENST00000561354 TNPO2O14787 897 aaKnown RBP14.62□□□□□ -0.07
CARMIL3-204ENST00000561354 LDHCP07864 332 aa14.62□□□□□ -0.07
CARMIL3-204ENST00000561354 RARSP54136 660 aaKnown RBP14.62□□□□□ -0.07
CARMIL3-204ENST00000561354 GSTO1P78417 241 aa14.62□□□□□ -0.07
CARMIL3-204ENST00000561354 CHRDL2Q6WN34 429 aa14.62□□□□□ -0.07
CARMIL3-204ENST00000561354 TBC1D2Q9BYX2 928 aa14.62□□□□□ -0.07
CARMIL3-204ENST00000561354 OSBPL5Q9H0X9 879 aaPredicted RBP14.62□□□□□ -0.07
CARMIL3-204ENST00000561354 HMG20BQ9P0W2 317 aa14.62□□□□□ -0.07
CARMIL3-204ENST00000561354 PNMA3Q9UL41 463 aa14.62□□□□□ -0.07
CARMIL3-204ENST00000561354 COL2A1P02458 1487 aaPredicted RBP14.62□□□□□ -0.07
CARMIL3-204ENST00000561354 FARP2O94887 1054 aaPredicted RBP14.61□□□□□ -0.07
CARMIL3-204ENST00000561354 FAM110CQ1W6H9 321 aa14.61□□□□□ -0.07
CARMIL3-204ENST00000561354 SPATA5Q8NB90 893 aa14.61□□□□□ -0.07
CARMIL3-204ENST00000561354 PROCA1Q8NCQ7 364 aaPredicted RBP14.61□□□□□ -0.07
CARMIL3-204ENST00000561354 COA7Q96BR5 231 aa14.61□□□□□ -0.07
CARMIL3-204ENST00000561354 NSUN4Q96CB9 384 aaKnown RBP14.61□□□□□ -0.07
CARMIL3-204ENST00000561354 NEUROD6Q96NK8 337 aa14.61□□□□□ -0.07
CARMIL3-204ENST00000561354 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.61□□□□□ -0.07
CARMIL3-204ENST00000561354 RBM27Q9P2N5 1060 aaKnown RBP14.61□□□□□ -0.07
CARMIL3-204ENST00000561354 NR2E3Q9Y5X4 410 aa14.61□□□□□ -0.07
CARMIL3-204ENST00000561354 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.61□□□□□ -0.07
CARMIL3-204ENST00000561354 INHAP05111 366 aa14.6□□□□□ -0.07
CARMIL3-204ENST00000561354 ELNP15502 786 aa14.6□□□□□ -0.07
CARMIL3-204ENST00000561354 ARID4AP29374 1257 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms