RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-208ENST00000561059 TMEM106CQ9BVX2 250 aa16.58■□□□□ 0.24
PSME1-208ENST00000561059 ZHX2Q9Y6X8 837 aa16.58■□□□□ 0.24
PSME1-208ENST00000561059 RFX7Q2KHR2 1363 aa16.57■□□□□ 0.24
PSME1-208ENST00000561059 PSMC4P43686 418 aa16.57■□□□□ 0.24
PSME1-208ENST00000561059 NOL9Q5SY16 702 aaKnown RBP16.57■□□□□ 0.24
PSME1-208ENST00000561059 GPAT2Q6NUI2 795 aa16.57■□□□□ 0.24
PSME1-208ENST00000561059 TRIM47Q96LD4 638 aa16.57■□□□□ 0.24
PSME1-208ENST00000561059 IDI2Q9BXS1 227 aa16.57■□□□□ 0.24
PSME1-208ENST00000561059 ZCCHC17Q9NP64 241 aaKnown RBP16.57■□□□□ 0.24
PSME1-208ENST00000561059 HMG20BQ9P0W2 317 aa16.57■□□□□ 0.24
PSME1-208ENST00000561059 AKAP2Q9Y2D5 859 aa16.57■□□□□ 0.24
PSME1-208ENST00000561059 MROH7-TTC4A0A0A0MT08 1334 aa16.56■□□□□ 0.24
PSME1-208ENST00000561059 ADGRA2Q96PE1 1338 aa16.56■□□□□ 0.24
PSME1-208ENST00000561059 ENTPD3O75355 529 aa16.56■□□□□ 0.24
PSME1-208ENST00000561059 FMNL1O95466 1100 aaPredicted RBP16.56■□□□□ 0.24
PSME1-208ENST00000561059 GNAI2P04899 355 aa16.56■□□□□ 0.24
PSME1-208ENST00000561059 MTX1Q13505 466 aa16.56■□□□□ 0.24
PSME1-208ENST00000561059 MVPQ14764 893 aaKnown RBP16.56■□□□□ 0.24
PSME1-208ENST00000561059 GORABQ5T7V8 394 aa16.56■□□□□ 0.24
PSME1-208ENST00000561059 ATF7IPQ6VMQ6 1270 aa16.56■□□□□ 0.24
PSME1-208ENST00000561059 GADL1Q6ZQY3 521 aa16.56■□□□□ 0.24
PSME1-208ENST00000561059 ERICH6Q7L0X2 663 aa16.56■□□□□ 0.24
PSME1-208ENST00000561059 NBPF11Q86T75 865 aa16.56■□□□□ 0.24
PSME1-208ENST00000561059 PICK1Q9NRD5 415 aa16.56■□□□□ 0.24
PSME1-208ENST00000561059 OSBPP22059 807 aa16.55■□□□□ 0.24
PSME1-208ENST00000561059 RHBDL3P58872 404 aa16.55■□□□□ 0.24
PSME1-208ENST00000561059 MTFR1Q15390 333 aa16.55■□□□□ 0.24
PSME1-208ENST00000561059 SPTY2D1Q68D10 685 aaPredicted RBP16.55■□□□□ 0.24
PSME1-208ENST00000561059 SCYL3Q8IZE3 742 aa16.55■□□□□ 0.24
PSME1-208ENST00000561059 TMEM57Q8N5G2 664 aa16.55■□□□□ 0.24
PSME1-208ENST00000561059 SPATA5Q8NB90 893 aa16.55■□□□□ 0.24
PSME1-208ENST00000561059 C1orf115Q9H7X2 142 aa16.55■□□□□ 0.24
PSME1-208ENST00000561059 MYH2Q9UKX2 1941 aa16.55■□□□□ 0.24
PSME1-208ENST00000561059 TRIM75PA6NK02 468 aa16.54■□□□□ 0.24
PSME1-208ENST00000561059 IPO8O15397 1037 aaKnown RBP16.54■□□□□ 0.24
PSME1-208ENST00000561059 PTPRAP18433 802 aa16.54■□□□□ 0.24
PSME1-208ENST00000561059 G3BP1Q13283 466 aaKnown RBP eCLIP16.54■□□□□ 0.248e-13■■■■□ 25.9
PSME1-208ENST00000561059 SLF2Q8IX21 1173 aa16.54■□□□□ 0.24
PSME1-208ENST00000561059 FAM163AQ96GL9 167 aaPredicted RBP16.54■□□□□ 0.24
PSME1-208ENST00000561059 SNRKQ9NRH2 765 aa16.54■□□□□ 0.24
PSME1-208ENST00000561059 RAI14Q9P0K7 980 aa16.54■□□□□ 0.24
PSME1-208ENST00000561059 PDS5AQ29RF7 1337 aaKnown RBP16.53■□□□□ 0.24
PSME1-208ENST00000561059 GPR75-ASB3A0A0A6YYF3 556 aa16.53■□□□□ 0.24
PSME1-208ENST00000561059 CXCL11O14625 94 aa16.53■□□□□ 0.24
PSME1-208ENST00000561059 MCAMP43121 646 aa16.53■□□□□ 0.24
PSME1-208ENST00000561059 PARK7Q99497 189 aaKnown RBP16.53■□□□□ 0.24
PSME1-208ENST00000561059 SRRDQ9UH36 339 aa16.53■□□□□ 0.24
PSME1-208ENST00000561059 AFG3L2Q9Y4W6 797 aa16.53■□□□□ 0.24
PSME1-208ENST00000561059 DOCK2Q92608 1830 aa16.53■□□□□ 0.24
PSME1-208ENST00000561059 MYPNQ86TC9 1320 aa16.52■□□□□ 0.24
PSME1-208ENST00000561059 A0A0G2JLL6 359 aaPredicted RBP16.52■□□□□ 0.24
PSME1-208ENST00000561059 PRKCZQ05513 592 aa16.52■□□□□ 0.24
PSME1-208ENST00000561059 PRRT2Q7Z6L0 340 aaPredicted RBP16.52■□□□□ 0.24
PSME1-208ENST00000561059 RAET1EQ8TD07 263 aa16.52■□□□□ 0.24
PSME1-208ENST00000561059 NSUN4Q96CB9 384 aaKnown RBP16.52■□□□□ 0.24
PSME1-208ENST00000561059 RBBP6Q7Z6E9 1792 aaKnown RBP16.51■□□□□ 0.23
PSME1-208ENST00000561059 BCRP11274 1271 aa16.51■□□□□ 0.23
PSME1-208ENST00000561059 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.51■□□□□ 0.23
PSME1-208ENST00000561059 BIN2Q9UBW5 565 aaPredicted RBP16.51■□□□□ 0.23
PSME1-208ENST00000561059 GABRQQ9UN88 632 aa16.51■□□□□ 0.23
PSME1-208ENST00000561059 ZBTB22O15209 634 aa16.5■□□□□ 0.23
PSME1-208ENST00000561059 CTNND1O60716 968 aaKnown RBP16.5■□□□□ 0.23
PSME1-208ENST00000561059 ARID4AP29374 1257 aaPredicted RBP16.5■□□□□ 0.23
PSME1-208ENST00000561059 MAP3K10Q02779 954 aa16.5■□□□□ 0.23
PSME1-208ENST00000561059 OS9Q13438 667 aaPredicted RBP16.5■□□□□ 0.23
PSME1-208ENST00000561059 RRP1BQ14684 758 aaKnown RBP16.5■□□□□ 0.23
PSME1-208ENST00000561059 TREML2Q5T2D2 321 aa16.5■□□□□ 0.23
PSME1-208ENST00000561059 FASTKD5Q7L8L6 764 aaKnown RBP16.5■□□□□ 0.23
PSME1-208ENST00000561059 TEX11Q8IYF3 940 aa16.5■□□□□ 0.23
PSME1-208ENST00000561059 SH3RF3Q8TEJ3 882 aaPredicted RBP16.5■□□□□ 0.23
PSME1-208ENST00000561059 DBNDD2Q9BQY9 259 aa16.5■□□□□ 0.23
PSME1-208ENST00000561059 LRP2BPQ9P2M1 347 aa16.5■□□□□ 0.23
PSME1-208ENST00000561059 GNRH1P01148 92 aa16.49■□□□□ 0.23
PSME1-208ENST00000561059 GRK4P32298 578 aa16.49■□□□□ 0.23
PSME1-208ENST00000561059 PRMT2P55345 433 aa16.49■□□□□ 0.23
PSME1-208ENST00000561059 GSTO1P78417 241 aa16.49■□□□□ 0.23
PSME1-208ENST00000561059 HNRNPUQ00839 825 aaKnown RBP eCLIP16.49■□□□□ 0.23
PSME1-208ENST00000561059 HABP4Q5JVS0 413 aaKnown RBP16.49■□□□□ 0.23
PSME1-208ENST00000561059 ZKSCAN2Q63HK3 967 aa16.49■□□□□ 0.23
PSME1-208ENST00000561059 SHISA4Q96DD7 197 aa16.49■□□□□ 0.23
PSME1-208ENST00000561059 CEP290O15078 2479 aa16.48■□□□□ 0.23
PSME1-208ENST00000561059 LDHCP07864 332 aa16.48■□□□□ 0.23
PSME1-208ENST00000561059 HOXD10P28358 340 aa16.48■□□□□ 0.23
PSME1-208ENST00000561059 FCGRTP55899 365 aa16.48■□□□□ 0.23
PSME1-208ENST00000561059 TNNI3KQ59H18 835 aa16.48■□□□□ 0.23
PSME1-208ENST00000561059 TTC39AQ5SRH9 613 aa16.48■□□□□ 0.23
PSME1-208ENST00000561059 SMCR8Q8TEV9 937 aaPredicted RBP16.48■□□□□ 0.23
PSME1-208ENST00000561059 OSBPL5Q9H0X9 879 aaPredicted RBP16.48■□□□□ 0.23
PSME1-208ENST00000561059 AATFQ9NY61 560 aaKnown RBP eCLIP16.48■□□□□ 0.23
PSME1-208ENST00000561059 TAOK2Q9UL54 1235 aa16.48■□□□□ 0.23
PSME1-208ENST00000561059 FPGT-TNNI3KV9GXZ4 949 aa16.48■□□□□ 0.23
PSME1-208ENST00000561059 SURF6O75683 361 aaKnown RBP16.47■□□□□ 0.23
PSME1-208ENST00000561059 UQCRFS1P1P0C7P4 283 aa16.47■□□□□ 0.23
PSME1-208ENST00000561059 RLBP1P12271 317 aa16.47■□□□□ 0.23
PSME1-208ENST00000561059 CCL5P13501 91 aa16.47■□□□□ 0.23
PSME1-208ENST00000561059 ELNP15502 786 aa16.47■□□□□ 0.23
PSME1-208ENST00000561059 SPP2Q13103 211 aa16.47■□□□□ 0.23
PSME1-208ENST00000561059 POLA2Q14181 598 aa16.47■□□□□ 0.23
PSME1-208ENST00000561059 SHROOM1Q2M3G4 852 aaPredicted RBP16.47■□□□□ 0.23
PSME1-208ENST00000561059 ADGRA1Q86SQ6 560 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms