RNA–Protein interactions for RNA: ENST00000560980.5

LRRC49-226, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 1,443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-226ENST00000560980 TRIM28Q13263 835 aaKnown RBP8.05□□□□□ -1.12
LRRC49-226ENST00000560980 SCARF1Q14162 830 aa8.05□□□□□ -1.12
LRRC49-226ENST00000560980 GCKRQ14397 625 aa8.05□□□□□ -1.12
LRRC49-226ENST00000560980 ZNF772Q68DY9 489 aaPredicted RBP8.05□□□□□ -1.12
LRRC49-226ENST00000560980 CHD1LQ86WJ1 897 aa8.05□□□□□ -1.12
LRRC49-226ENST00000560980 CNKSR1Q969H4 720 aa8.05□□□□□ -1.12
LRRC49-226ENST00000560980 SYTL4Q96C24 671 aaPredicted RBP8.05□□□□□ -1.12
LRRC49-226ENST00000560980 QTRT2Q9H974 415 aaKnown RBP8.05□□□□□ -1.12
LRRC49-226ENST00000560980 ZNF358Q9NW07 568 aa8.05□□□□□ -1.12
LRRC49-226ENST00000560980 LRRFIP2Q9Y608 721 aaKnown RBP8.05□□□□□ -1.12
LRRC49-226ENST00000560980 DDX60Q8IY21 1712 aaKnown RBP8.05□□□□□ -1.12
LRRC49-226ENST00000560980 TNS1Q9HBL0 1735 aaKnown RBP8.05□□□□□ -1.12
LRRC49-226ENST00000560980 TMEM229AB2RXF0 380 aa8.04□□□□□ -1.12
LRRC49-226ENST00000560980 NBPF7P0C2Y1 421 aaPredicted RBP8.04□□□□□ -1.12
LRRC49-226ENST00000560980 HMGB2P26583 209 aaKnown RBP8.04□□□□□ -1.12
LRRC49-226ENST00000560980 CLN3Q13286 438 aa8.04□□□□□ -1.12
LRRC49-226ENST00000560980 HSP90AB3PQ58FF7 597 aa8.04□□□□□ -1.12
LRRC49-226ENST00000560980 KDF1Q8NAX2 398 aaPredicted RBP8.04□□□□□ -1.12
LRRC49-226ENST00000560980 CCDC191Q8NCU4 936 aa8.04□□□□□ -1.12
LRRC49-226ENST00000560980 ACSBG1Q96GR2 724 aa8.04□□□□□ -1.12
LRRC49-226ENST00000560980 HINFPQ9BQA5 517 aa8.04□□□□□ -1.12
LRRC49-226ENST00000560980 POLMQ9NP87 494 aaPredicted RBP8.04□□□□□ -1.12
LRRC49-226ENST00000560980 C9orf78Q9NZ63 289 aaPredicted RBP8.04□□□□□ -1.12
LRRC49-226ENST00000560980 MAP3K15Q6ZN16 1313 aa8.04□□□□□ -1.12
LRRC49-226ENST00000560980 ERVV-1B6SEH8 477 aa8.03□□□□□ -1.12
LRRC49-226ENST00000560980 RBM6P78332 1123 aaKnown RBP8.03□□□□□ -1.12
LRRC49-226ENST00000560980 CWF19L2Q2TBE0 894 aaKnown RBP8.03□□□□□ -1.12
LRRC49-226ENST00000560980 HSP90AB4PQ58FF6 505 aa8.03□□□□□ -1.12
LRRC49-226ENST00000560980 PHLDB3Q6NSJ2 640 aa8.03□□□□□ -1.12
LRRC49-226ENST00000560980 KIF6Q6ZMV9 814 aa8.03□□□□□ -1.12
LRRC49-226ENST00000560980 TTLL7Q6ZT98 887 aa8.03□□□□□ -1.12
LRRC49-226ENST00000560980 CLP1Q92989 425 aaKnown RBP8.03□□□□□ -1.12
LRRC49-226ENST00000560980 PURBQ96QR8 312 aaKnown RBP8.03□□□□□ -1.12
LRRC49-226ENST00000560980 MYD88Q99836 296 aa8.03□□□□□ -1.12
LRRC49-226ENST00000560980 ESYT1Q9BSJ8 1104 aa8.03□□□□□ -1.12
LRRC49-226ENST00000560980 ISCA1Q9BUE6 129 aa8.03□□□□□ -1.12
LRRC49-226ENST00000560980 CCDC87Q9NVE4 849 aa8.03□□□□□ -1.12
LRRC49-226ENST00000560980 CNTNAP4Q9C0A0 1308 aa8.03□□□□□ -1.12
LRRC49-226ENST00000560980 QSER1Q2KHR3 1735 aa8.03□□□□□ -1.12
LRRC49-226ENST00000560980 PNMA6EA0A0J9YXQ4 647 aa8.03□□□□□ -1.12
LRRC49-226ENST00000560980 H7C1W4 665 aa8.03□□□□□ -1.12
LRRC49-226ENST00000560980 KCNQ2O43526 872 aa8.03□□□□□ -1.12
LRRC49-226ENST00000560980 RAB11FIP3O75154 756 aa8.03□□□□□ -1.12
LRRC49-226ENST00000560980 IL2RAP01589 272 aa8.03□□□□□ -1.12
LRRC49-226ENST00000560980 RGS3P49796 1198 aa8.03□□□□□ -1.12
LRRC49-226ENST00000560980 EIF5P55010 431 aaKnown RBP8.03□□□□□ -1.12
LRRC49-226ENST00000560980 TCIRG1Q13488 830 aa8.03□□□□□ -1.12
LRRC49-226ENST00000560980 TLR1Q15399 786 aa8.03□□□□□ -1.12
LRRC49-226ENST00000560980 RABL6Q3YEC7 729 aaPredicted RBP8.03□□□□□ -1.12
LRRC49-226ENST00000560980 TSEN2Q8NCE0 465 aaKnown RBP8.03□□□□□ -1.12
LRRC49-226ENST00000560980 INSM2Q96T92 566 aaPredicted RBP8.03□□□□□ -1.12
LRRC49-226ENST00000560980 BACH2Q9BYV9 841 aa8.03□□□□□ -1.12
LRRC49-226ENST00000560980 CWC25Q9NXE8 425 aaPredicted RBP8.03□□□□□ -1.12
LRRC49-226ENST00000560980 ZBTB1Q9Y2K1 713 aa8.03□□□□□ -1.12
LRRC49-226ENST00000560980 NOP58Q9Y2X3 529 aaKnown RBP8.03□□□□□ -1.12
LRRC49-226ENST00000560980 A0A1B0GUL6 1792 aa8.02□□□□□ -1.13
LRRC49-226ENST00000560980 SPINT1O43278 529 aa8.02□□□□□ -1.13
LRRC49-226ENST00000560980 GTF2E1P29083 439 aaPredicted RBP8.02□□□□□ -1.13
LRRC49-226ENST00000560980 CRKLP46109 303 aaKnown RBP8.02□□□□□ -1.13
LRRC49-226ENST00000560980 PIP4K2AP48426 406 aaPredicted RBP8.02□□□□□ -1.13
LRRC49-226ENST00000560980 CASP7P55210 303 aa8.02□□□□□ -1.13
LRRC49-226ENST00000560980 ITPK1Q13572 414 aa8.02□□□□□ -1.13
LRRC49-226ENST00000560980 SLC27A3Q5K4L6 730 aa8.02□□□□□ -1.13
LRRC49-226ENST00000560980 ANKRD45Q5TZF3 282 aa8.02□□□□□ -1.13
LRRC49-226ENST00000560980 INTS5Q6P9B9 1019 aaKnown RBP8.02□□□□□ -1.13
LRRC49-226ENST00000560980 TREML4Q6UXN2 200 aa8.02□□□□□ -1.13
LRRC49-226ENST00000560980 FAM196AQ6ZSG2 479 aa8.02□□□□□ -1.13
LRRC49-226ENST00000560980 PPP1R42Q7Z4L9 355 aa8.02□□□□□ -1.13
LRRC49-226ENST00000560980 XAGE2Q96GT9 111 aa8.02□□□□□ -1.13
LRRC49-226ENST00000560980 KAZALD1Q96I82 304 aa8.02□□□□□ -1.13
LRRC49-226ENST00000560980 GZF1Q9H116 711 aaPredicted RBP8.02□□□□□ -1.13
LRRC49-226ENST00000560980 IVNS1ABPQ9Y6Y0 642 aa8.02□□□□□ -1.13
LRRC49-226ENST00000560980 SPEF2Q9C093 1822 aa8.01□□□□□ -1.13
LRRC49-226ENST00000560980 MYH7P12883 1935 aa8.01□□□□□ -1.13
LRRC49-226ENST00000560980 A0A087WZG4 1122 aa8.01□□□□□ -1.13
LRRC49-226ENST00000560980 M0R2N6 131 aa8.01□□□□□ -1.13
LRRC49-226ENST00000560980 SRGAP3O43295 1099 aa8.01□□□□□ -1.13
LRRC49-226ENST00000560980 SSFA2P28290 1259 aa8.01□□□□□ -1.13
LRRC49-226ENST00000560980 SWI5Q1ZZU3 235 aa8.01□□□□□ -1.13
LRRC49-226ENST00000560980 BMP2KLQ5H9B9 411 aa8.01□□□□□ -1.13
LRRC49-226ENST00000560980 TRIM46Q7Z4K8 759 aa8.01□□□□□ -1.13
LRRC49-226ENST00000560980 NPM2Q86SE8 214 aaKnown RBP8.01□□□□□ -1.13
LRRC49-226ENST00000560980 SUCLG2Q96I99 432 aa8.01□□□□□ -1.13
LRRC49-226ENST00000560980 LNPKQ9C0E8 428 aa8.01□□□□□ -1.13
LRRC49-226ENST00000560980 GMPR2Q9P2T1 348 aaKnown RBP8.01□□□□□ -1.13
LRRC49-226ENST00000560980 CDHR2Q9BYE9 1310 aa8.01□□□□□ -1.13
LRRC49-226ENST00000560980 ARAP2Q8WZ64 1704 aa8□□□□□ -1.13
LRRC49-226ENST00000560980 PATL2C9JE40 543 aaKnown RBP8□□□□□ -1.13
LRRC49-226ENST00000560980 LGR5O75473 907 aa8□□□□□ -1.13
LRRC49-226ENST00000560980 PCCAP05165 728 aaPredicted RBP8□□□□□ -1.13
LRRC49-226ENST00000560980 SMTNP53814 917 aa8□□□□□ -1.13
LRRC49-226ENST00000560980 CENPCQ03188 943 aa8□□□□□ -1.13
LRRC49-226ENST00000560980 C8orf34Q49A92 452 aa8□□□□□ -1.13
LRRC49-226ENST00000560980 UBE3BQ7Z3V4 1068 aa8□□□□□ -1.13
LRRC49-226ENST00000560980 KRT27Q7Z3Y8 459 aa8□□□□□ -1.13
LRRC49-226ENST00000560980 SKAP1Q86WV1 359 aa8□□□□□ -1.13
LRRC49-226ENST00000560980 ERC1Q8IUD2 1116 aa8□□□□□ -1.13
LRRC49-226ENST00000560980 TNS4Q8IZW8 715 aa8□□□□□ -1.13
LRRC49-226ENST00000560980 ZFP42Q96MM3 310 aa8□□□□□ -1.13
LRRC49-226ENST00000560980 PLA2G12BQ9BX93 195 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms