RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 MAP3K9P80192 1104 aa18.56■□□□□ 0.56
SNRPA1-213ENST00000560856 ANKRD45Q5TZF3 282 aa18.56■□□□□ 0.56
SNRPA1-213ENST00000560856 MIGA2Q7L4E1 593 aa18.56■□□□□ 0.56
SNRPA1-213ENST00000560856 TEX11Q8IYF3 940 aa18.56■□□□□ 0.56
SNRPA1-213ENST00000560856 ANKRD13AQ8IZ07 590 aa18.56■□□□□ 0.56
SNRPA1-213ENST00000560856 SLC10A4Q96EP9 437 aa18.56■□□□□ 0.56
SNRPA1-213ENST00000560856 CSRNP1Q96S65 589 aa18.56■□□□□ 0.56
SNRPA1-213ENST00000560856 RWDD1Q9H446 243 aaPredicted RBP18.56■□□□□ 0.56
SNRPA1-213ENST00000560856 ZNF112Q9UJU3 913 aa18.56■□□□□ 0.56
SNRPA1-213ENST00000560856 FOXN1O15353 648 aa18.55■□□□□ 0.56
SNRPA1-213ENST00000560856 SLURP2P0DP57 97 aa18.55■□□□□ 0.56
SNRPA1-213ENST00000560856 GJA5P36382 358 aa18.55■□□□□ 0.56
SNRPA1-213ENST00000560856 PICALMQ13492 652 aa18.55■□□□□ 0.56
SNRPA1-213ENST00000560856 SPRYD7Q5W111 196 aa18.55■□□□□ 0.56
SNRPA1-213ENST00000560856 PI4K2BQ8TCG2 481 aa18.55■□□□□ 0.56
SNRPA1-213ENST00000560856 HOOK2Q96ED9 719 aa18.55■□□□□ 0.56
SNRPA1-213ENST00000560856 OTOFQ9HC10 1997 aa18.54■□□□□ 0.56
SNRPA1-213ENST00000560856 PLCG2P16885 1265 aa18.54■□□□□ 0.56
SNRPA1-213ENST00000560856 VGLL4Q14135 290 aa18.54■□□□□ 0.56
SNRPA1-213ENST00000560856 SLFNL1Q499Z3 407 aa18.54■□□□□ 0.56
SNRPA1-213ENST00000560856 SLC9C2Q5TAH2 1124 aa18.54■□□□□ 0.56
SNRPA1-213ENST00000560856 DCAF15Q66K64 600 aa18.54■□□□□ 0.56
SNRPA1-213ENST00000560856 MIGA1Q8NAN2 632 aa18.54■□□□□ 0.56
SNRPA1-213ENST00000560856 WNK4Q96J92 1243 aa18.54■□□□□ 0.56
SNRPA1-213ENST00000560856 RIOK1Q9BRS2 568 aaKnown RBP18.54■□□□□ 0.56
SNRPA1-213ENST00000560856 OSBPL5Q9H0X9 879 aaPredicted RBP18.54■□□□□ 0.56
SNRPA1-213ENST00000560856 TTC41PQ6P2S7 1318 aa18.53■□□□□ 0.56
SNRPA1-213ENST00000560856 ZNF532Q9HCE3 1301 aa18.53■□□□□ 0.56
SNRPA1-213ENST00000560856 CHGBP05060 677 aa18.53■□□□□ 0.56
SNRPA1-213ENST00000560856 TGFBRAP1Q8WUH2 860 aa18.53■□□□□ 0.56
SNRPA1-213ENST00000560856 NOL10Q9BSC4 688 aaKnown RBP18.53■□□□□ 0.56
SNRPA1-213ENST00000560856 ZNF341Q9BYN7 854 aa18.53■□□□□ 0.56
SNRPA1-213ENST00000560856 AK9Q5TCS8 1911 aa18.53■□□□□ 0.56
SNRPA1-213ENST00000560856 COL2A1P02458 1487 aaPredicted RBP18.52■□□□□ 0.56
SNRPA1-213ENST00000560856 PHF20L1A8MW92 1017 aa18.52■□□□□ 0.56
SNRPA1-213ENST00000560856 INPP5BP32019 993 aa18.52■□□□□ 0.56
SNRPA1-213ENST00000560856 ADD2P35612 726 aa18.52■□□□□ 0.56
SNRPA1-213ENST00000560856 MKRN3Q13064 507 aaKnown RBP18.52■□□□□ 0.56
SNRPA1-213ENST00000560856 CNKSR2Q8WXI2 1034 aa18.52■□□□□ 0.56
SNRPA1-213ENST00000560856 GPATCH3Q96I76 525 aa18.52■□□□□ 0.56
SNRPA1-213ENST00000560856 WRNIP1Q96S55 665 aa18.52■□□□□ 0.56
SNRPA1-213ENST00000560856 ELP3Q9H9T3 547 aa18.52■□□□□ 0.56
SNRPA1-213ENST00000560856 STAP2Q9UGK3 403 aa18.52■□□□□ 0.56
SNRPA1-213ENST00000560856 SNCAIPQ9Y6H5 919 aa18.52■□□□□ 0.56
SNRPA1-213ENST00000560856 MX1P20591 662 aa18.51■□□□□ 0.55
SNRPA1-213ENST00000560856 TM4SF4P48230 202 aa18.51■□□□□ 0.55
SNRPA1-213ENST00000560856 MAPKAPK5Q8IW41 473 aa18.51■□□□□ 0.55
SNRPA1-213ENST00000560856 ZSCAN29Q8IWY8 852 aaPredicted RBP18.51■□□□□ 0.55
SNRPA1-213ENST00000560856 ZKSCAN4Q969J2 545 aaPredicted RBP18.51■□□□□ 0.55
SNRPA1-213ENST00000560856 CDK5RAP2Q96SN8 1893 aa18.51■□□□□ 0.55
SNRPA1-213ENST00000560856 FLT1P17948 1338 aa18.5■□□□□ 0.55
SNRPA1-213ENST00000560856 TBC1D12O60347 775 aa18.5■□□□□ 0.55
SNRPA1-213ENST00000560856 ZBTB48P10074 688 aaPredicted RBP18.5■□□□□ 0.55
SNRPA1-213ENST00000560856 HSPA8P11142 646 aaKnown RBP18.5■□□□□ 0.55
SNRPA1-213ENST00000560856 NUCB1Q02818 461 aa18.5■□□□□ 0.55
SNRPA1-213ENST00000560856 UBE3CQ15386 1083 aa18.5■□□□□ 0.55
SNRPA1-213ENST00000560856 CERS3Q8IU89 383 aa18.5■□□□□ 0.55
SNRPA1-213ENST00000560856 REM2Q8IYK8 340 aaPredicted RBP18.5■□□□□ 0.55
SNRPA1-213ENST00000560856 KBTBD3Q8NAB2 608 aa18.5■□□□□ 0.55
SNRPA1-213ENST00000560856 LNPKQ9C0E8 428 aa18.5■□□□□ 0.55
SNRPA1-213ENST00000560856 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.5■□□□□ 0.55
SNRPA1-213ENST00000560856 GLRX3O76003 335 aaKnown RBP18.49■□□□□ 0.55
SNRPA1-213ENST00000560856 CTCFP49711 727 aaPredicted RBP18.49■□□□□ 0.55
SNRPA1-213ENST00000560856 PDE1AP54750 535 aa18.49■□□□□ 0.55
SNRPA1-213ENST00000560856 NOL9Q5SY16 702 aaKnown RBP18.49■□□□□ 0.55
SNRPA1-213ENST00000560856 B4GALNT3Q6L9W6 998 aa18.49■□□□□ 0.55
SNRPA1-213ENST00000560856 METTL16Q86W50 562 aaKnown RBP18.49■□□□□ 0.55
SNRPA1-213ENST00000560856 AIDAQ96BJ3 306 aa18.49■□□□□ 0.55
SNRPA1-213ENST00000560856 OPTNQ96CV9 577 aa18.49■□□□□ 0.55
SNRPA1-213ENST00000560856 CSADQ9Y600 493 aa18.49■□□□□ 0.55
SNRPA1-213ENST00000560856 FOCADQ5VW36 1801 aa18.49■□□□□ 0.55
SNRPA1-213ENST00000560856 MAGEB6P1A0A0J9YX57 407 aa18.48■□□□□ 0.55
SNRPA1-213ENST00000560856 SPDYE5A6NIY4 337 aa18.48■□□□□ 0.55
SNRPA1-213ENST00000560856 ERC2O15083 957 aa18.48■□□□□ 0.55
SNRPA1-213ENST00000560856 CHD1LQ86WJ1 897 aa18.48■□□□□ 0.55
SNRPA1-213ENST00000560856 LCORLQ8N3X6 602 aa18.48■□□□□ 0.55
SNRPA1-213ENST00000560856 MS4A4AQ96JQ5 239 aa18.48■□□□□ 0.55
SNRPA1-213ENST00000560856 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.48■□□□□ 0.55
SNRPA1-213ENST00000560856 DHX36Q9H2U1 1008 aaKnown RBP18.48■□□□□ 0.55
SNRPA1-213ENST00000560856 RNF186Q9NXI6 227 aa18.48■□□□□ 0.55
SNRPA1-213ENST00000560856 SIPA1L1O43166 1804 aa18.47■□□□□ 0.55
SNRPA1-213ENST00000560856 TESPA1A2RU30 521 aaPredicted RBP18.47■□□□□ 0.55
SNRPA1-213ENST00000560856 MANSC4A6NHS7 340 aaPredicted RBP18.47■□□□□ 0.55
SNRPA1-213ENST00000560856 FAM196BA6NMK8 535 aa18.47■□□□□ 0.55
SNRPA1-213ENST00000560856 CA12O43570 354 aa18.47■□□□□ 0.55
SNRPA1-213ENST00000560856 ERO1BQ86YB8 467 aa18.47■□□□□ 0.55
SNRPA1-213ENST00000560856 BEGAINQ9BUH8 593 aa18.47■□□□□ 0.55
SNRPA1-213ENST00000560856 ZBTB47Q9UFB7 747 aaPredicted RBP18.47■□□□□ 0.55
SNRPA1-213ENST00000560856 TSKSQ9UJT2 592 aa18.47■□□□□ 0.55
SNRPA1-213ENST00000560856 PALD1Q9ULE6 856 aa18.47■□□□□ 0.55
SNRPA1-213ENST00000560856 LAMB1P07942 1786 aa18.46■□□□□ 0.55
SNRPA1-213ENST00000560856 LBX1P52954 281 aa18.46■□□□□ 0.55
SNRPA1-213ENST00000560856 RRP1BQ14684 758 aaKnown RBP18.46■□□□□ 0.55
SNRPA1-213ENST00000560856 PUS7LQ9H0K6 701 aaKnown RBP18.46■□□□□ 0.55
SNRPA1-213ENST00000560856 DNAJC18Q9H819 358 aa18.46■□□□□ 0.55
SNRPA1-213ENST00000560856 SAGE1Q9NXZ1 904 aa18.46■□□□□ 0.55
SNRPA1-213ENST00000560856 PI4KBQ9UBF8 816 aa18.46■□□□□ 0.55
SNRPA1-213ENST00000560856 SAP30BPQ9UHR5 308 aaKnown RBP18.46■□□□□ 0.55
SNRPA1-213ENST00000560856 MYH7P12883 1935 aa18.45■□□□□ 0.54
SNRPA1-213ENST00000560856 TRPA1O75762 1119 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms