RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 NSUN4Q96CB9 384 aaKnown RBP13.81□□□□□ -0.2
GABPB1-210ENST00000560825 TMOD2Q9NZR1 351 aa13.81□□□□□ -0.2
GABPB1-210ENST00000560825 FPGT-TNNI3KV9GXZ4 949 aa13.81□□□□□ -0.2
GABPB1-210ENST00000560825 MGAMO43451 1857 aa13.81□□□□□ -0.2
GABPB1-210ENST00000560825 MROH7-TTC4A0A0A0MT08 1334 aa13.81□□□□□ -0.2
GABPB1-210ENST00000560825 PDS5AQ29RF7 1337 aaKnown RBP13.81□□□□□ -0.2
GABPB1-210ENST00000560825 SURF6O75683 361 aaKnown RBP13.81□□□□□ -0.2
GABPB1-210ENST00000560825 PICALMQ13492 652 aa13.81□□□□□ -0.2
GABPB1-210ENST00000560825 MOGSQ13724 837 aa13.81□□□□□ -0.2
GABPB1-210ENST00000560825 MVPQ14764 893 aaKnown RBP13.81□□□□□ -0.2
GABPB1-210ENST00000560825 CCDC84Q86UT8 332 aaPredicted RBP13.81□□□□□ -0.2
GABPB1-210ENST00000560825 SIRT2Q8IXJ6 389 aa13.81□□□□□ -0.2
GABPB1-210ENST00000560825 FTSJ3Q8IY81 847 aaKnown RBP13.81□□□□□ -0.2
GABPB1-210ENST00000560825 EAF2Q96CJ1 260 aaPredicted RBP13.81□□□□□ -0.2
GABPB1-210ENST00000560825 CCDC8Q9H0W5 538 aaPredicted RBP13.81□□□□□ -0.2
GABPB1-210ENST00000560825 ZNF112Q9UJU3 913 aa13.81□□□□□ -0.2
GABPB1-210ENST00000560825 DBNLQ9UJU6 430 aaKnown RBP13.81□□□□□ -0.2
GABPB1-210ENST00000560825 HDAC5Q9UQL6 1122 aa13.81□□□□□ -0.2
GABPB1-210ENST00000560825 AKAP2Q9Y2D5 859 aa13.81□□□□□ -0.2
GABPB1-210ENST00000560825 ECM2O94769 699 aaPredicted RBP13.8□□□□□ -0.2
GABPB1-210ENST00000560825 INHBEP58166 350 aa13.8□□□□□ -0.2
GABPB1-210ENST00000560825 RRP1BQ14684 758 aaKnown RBP13.8□□□□□ -0.2
GABPB1-210ENST00000560825 NOM1Q5C9Z4 860 aaKnown RBP13.8□□□□□ -0.2
GABPB1-210ENST00000560825 OTOP1Q7RTM1 612 aa13.8□□□□□ -0.2
GABPB1-210ENST00000560825 DZIP1Q86YF9 867 aaKnown RBP13.8□□□□□ -0.2
GABPB1-210ENST00000560825 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.8□□□□□ -0.2
GABPB1-210ENST00000560825 IDI2Q9BXS1 227 aa13.8□□□□□ -0.2
GABPB1-210ENST00000560825 ARHGAP39Q9C0H5 1083 aa13.8□□□□□ -0.2
GABPB1-210ENST00000560825 EXOC6BQ9Y2D4 811 aa13.8□□□□□ -0.2
GABPB1-210ENST00000560825 CSADQ9Y600 493 aa13.8□□□□□ -0.2
GABPB1-210ENST00000560825 RBBP6Q7Z6E9 1792 aaKnown RBP13.79□□□□□ -0.2
GABPB1-210ENST00000560825 MYH1P12882 1939 aa13.79□□□□□ -0.2
GABPB1-210ENST00000560825 GPR75-ASB3A0A0A6YYF3 556 aa13.79□□□□□ -0.2
GABPB1-210ENST00000560825 BTBD19C9JJ37 291 aa13.79□□□□□ -0.2
GABPB1-210ENST00000560825 CYP2E1P05181 493 aaPredicted RBP13.79□□□□□ -0.2
GABPB1-210ENST00000560825 CTGFP29279 349 aa13.79□□□□□ -0.2
GABPB1-210ENST00000560825 ERO1BQ86YB8 467 aa13.79□□□□□ -0.2
GABPB1-210ENST00000560825 FAM163AQ96GL9 167 aaPredicted RBP13.79□□□□□ -0.2
GABPB1-210ENST00000560825 ZNF341Q9BYN7 854 aa13.79□□□□□ -0.2
GABPB1-210ENST00000560825 PIH1D3Q9NQM4 214 aaKnown RBP13.79□□□□□ -0.2
GABPB1-210ENST00000560825 NOP58Q9Y2X3 529 aaKnown RBP13.79□□□□□ -0.2
GABPB1-210ENST00000560825 ZAP70P43403 619 aa13.78□□□□□ -0.2
GABPB1-210ENST00000560825 SHROOM1Q2M3G4 852 aaPredicted RBP13.78□□□□□ -0.2
GABPB1-210ENST00000560825 GORABQ5T7V8 394 aa13.78□□□□□ -0.2
GABPB1-210ENST00000560825 ERICH6Q7L0X2 663 aa13.78□□□□□ -0.2
GABPB1-210ENST00000560825 SH3RF3Q8TEJ3 882 aaPredicted RBP13.78□□□□□ -0.2
GABPB1-210ENST00000560825 COG6Q9Y2V7 657 aa13.78□□□□□ -0.2
GABPB1-210ENST00000560825 DDX60LQ5H9U9 1706 aaKnown RBP13.78□□□□□ -0.2
GABPB1-210ENST00000560825 LOC285556D6RIA3 1793 aa13.77□□□□□ -0.2
GABPB1-210ENST00000560825 ALDH1A1P00352 501 aa13.77□□□□□ -0.21
GABPB1-210ENST00000560825 GTF2A2P52657 109 aa13.77□□□□□ -0.21
GABPB1-210ENST00000560825 PPIL2Q13356 520 aa13.77□□□□□ -0.21
GABPB1-210ENST00000560825 TAF1CQ15572 869 aaPredicted RBP13.77□□□□□ -0.21
GABPB1-210ENST00000560825 ANTXR1Q9H6X2 564 aa13.77□□□□□ -0.21
GABPB1-210ENST00000560825 RAI14Q9P0K7 980 aa13.77□□□□□ -0.21
GABPB1-210ENST00000560825 TRIM17Q9Y577 477 aa13.77□□□□□ -0.21
GABPB1-210ENST00000560825 MYCNP04198 464 aaPredicted RBP13.76□□□□□ -0.21
GABPB1-210ENST00000560825 JAG1P78504 1218 aa13.76□□□□□ -0.21
GABPB1-210ENST00000560825 MLLT1Q03111 559 aaPredicted RBP13.76□□□□□ -0.21
GABPB1-210ENST00000560825 OS9Q13438 667 aaPredicted RBP13.76□□□□□ -0.21
GABPB1-210ENST00000560825 ZGPATQ8N5A5 531 aaKnown RBP13.76□□□□□ -0.21
GABPB1-210ENST00000560825 IL1RAPL2Q9NP60 686 aa13.76□□□□□ -0.21
GABPB1-210ENST00000560825 GPR108Q9NPR9 543 aa13.76□□□□□ -0.21
GABPB1-210ENST00000560825 ENTPD3O75355 529 aa13.75□□□□□ -0.21
GABPB1-210ENST00000560825 DYNLL1P63167 89 aaKnown RBP13.75□□□□□ -0.21
GABPB1-210ENST00000560825 MAP3K10Q02779 954 aa13.75□□□□□ -0.21
GABPB1-210ENST00000560825 TTC39AQ5SRH9 613 aa13.75□□□□□ -0.21
GABPB1-210ENST00000560825 NOL9Q5SY16 702 aaKnown RBP13.75□□□□□ -0.21
GABPB1-210ENST00000560825 DCAF15Q66K64 600 aa13.75□□□□□ -0.21
GABPB1-210ENST00000560825 GPAT2Q6NUI2 795 aa13.75□□□□□ -0.21
GABPB1-210ENST00000560825 FBXO46Q6PJ61 603 aaPredicted RBP13.75□□□□□ -0.21
GABPB1-210ENST00000560825 KCNH4Q9UQ05 1017 aa13.75□□□□□ -0.21
GABPB1-210ENST00000560825 ADGRA2Q96PE1 1338 aa13.75□□□□□ -0.21
GABPB1-210ENST00000560825 APBB1O00213 710 aa13.74□□□□□ -0.21
GABPB1-210ENST00000560825 SP3Q02447 781 aa13.74□□□□□ -0.21
GABPB1-210ENST00000560825 PPATQ06203 517 aa13.74□□□□□ -0.21
GABPB1-210ENST00000560825 SPTY2D1Q68D10 685 aaPredicted RBP13.74□□□□□ -0.21
GABPB1-210ENST00000560825 ZSCAN29Q8IWY8 852 aaPredicted RBP13.74□□□□□ -0.21
GABPB1-210ENST00000560825 AATFQ9NY61 560 aaKnown RBP eCLIP13.74□□□□□ -0.213e-7■■■□□ 15.6
GABPB1-210ENST00000560825 NAV1Q8NEY1 1877 aa13.74□□□□□ -0.21
GABPB1-210ENST00000560825 POTEFA5A3E0 1075 aa13.73□□□□□ -0.21
GABPB1-210ENST00000560825 CHGBP05060 677 aa13.73□□□□□ -0.21
GABPB1-210ENST00000560825 UQCRFS1P1P0C7P4 283 aa13.73□□□□□ -0.21
GABPB1-210ENST00000560825 CETPP11597 493 aa13.73□□□□□ -0.21
GABPB1-210ENST00000560825 PTPRAP18433 802 aa13.73□□□□□ -0.21
GABPB1-210ENST00000560825 EVX2Q03828 476 aa13.73□□□□□ -0.21
GABPB1-210ENST00000560825 SNAPC2Q13487 334 aa13.73□□□□□ -0.21
GABPB1-210ENST00000560825 SLC4A8Q2Y0W8 1093 aa13.73□□□□□ -0.21
GABPB1-210ENST00000560825 SP7Q8TDD2 431 aaPredicted RBP13.73□□□□□ -0.21
GABPB1-210ENST00000560825 OSBPL5Q9H0X9 879 aaPredicted RBP13.73□□□□□ -0.21
GABPB1-210ENST00000560825 BCL11AQ9H165 835 aa13.73□□□□□ -0.21
GABPB1-210ENST00000560825 DNAJC18Q9H819 358 aa13.73□□□□□ -0.21
GABPB1-210ENST00000560825 ZBTB40Q9NUA8 1239 aa13.73□□□□□ -0.21
GABPB1-210ENST00000560825 LRP2BPQ9P2M1 347 aa13.73□□□□□ -0.21
GABPB1-210ENST00000560825 CPA4Q9UI42 421 aa13.73□□□□□ -0.21
GABPB1-210ENST00000560825 PTPN22Q9Y2R2 807 aa13.73□□□□□ -0.21
GABPB1-210ENST00000560825 MYH7P12883 1935 aa13.73□□□□□ -0.21
GABPB1-210ENST00000560825 CYP2C8P10632 490 aa13.73□□□□□ -0.21
GABPB1-210ENST00000560825 SLFNL1Q499Z3 407 aa13.73□□□□□ -0.21
GABPB1-210ENST00000560825 AACSQ86V21 672 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms