RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 MRIQ9BWK5 157 aa13.1□□□□□ -0.31
CDC42BPB-207ENST00000560492 SIL1Q9H173 461 aa13.1□□□□□ -0.31
CDC42BPB-207ENST00000560492 GNL3LQ9NVN8 582 aaKnown RBP13.1□□□□□ -0.31
CDC42BPB-207ENST00000560492 DOCK1Q14185 1865 aa13.1□□□□□ -0.31
CDC42BPB-207ENST00000560492 UTYO14607 1347 aa13.1□□□□□ -0.31
CDC42BPB-207ENST00000560492 GJB1P08034 283 aa13.09□□□□□ -0.31
CDC42BPB-207ENST00000560492 PRDX5P30044 214 aa13.09□□□□□ -0.31
CDC42BPB-207ENST00000560492 GJA8P48165 433 aa13.09□□□□□ -0.31
CDC42BPB-207ENST00000560492 NFIAQ12857 509 aa13.09□□□□□ -0.31
CDC42BPB-207ENST00000560492 SLAIN1Q8ND83 568 aa13.09□□□□□ -0.31
CDC42BPB-207ENST00000560492 SMCR8Q8TEV9 937 aaPredicted RBP13.09□□□□□ -0.31
CDC42BPB-207ENST00000560492 KCNH4Q9UQ05 1017 aa13.09□□□□□ -0.31
CDC42BPB-207ENST00000560492 KIF16BQ96L93 1317 aa13.09□□□□□ -0.31
CDC42BPB-207ENST00000560492 PTPRFP10586 1907 aa13.08□□□□□ -0.32
CDC42BPB-207ENST00000560492 EYA2O00167 538 aa13.08□□□□□ -0.32
CDC42BPB-207ENST00000560492 GALR2O43603 387 aaPredicted RBP13.08□□□□□ -0.32
CDC42BPB-207ENST00000560492 ADCY3O60266 1144 aa13.08□□□□□ -0.32
CDC42BPB-207ENST00000560492 ATP2B3Q16720 1220 aa13.08□□□□□ -0.32
CDC42BPB-207ENST00000560492 FASTKD5Q7L8L6 764 aaKnown RBP13.08□□□□□ -0.32
CDC42BPB-207ENST00000560492 U2AF1L4Q8WU68 220 aaKnown RBP13.08□□□□□ -0.32
CDC42BPB-207ENST00000560492 UNC93B1Q9H1C4 597 aa13.08□□□□□ -0.32
CDC42BPB-207ENST00000560492 GABRQQ9UN88 632 aa13.08□□□□□ -0.32
CDC42BPB-207ENST00000560492 LRRFIP2Q9Y608 721 aaKnown RBP13.08□□□□□ -0.32
CDC42BPB-207ENST00000560492 ZHX2Q9Y6X8 837 aa13.08□□□□□ -0.32
CDC42BPB-207ENST00000560492 CXCL11O14625 94 aa13.07□□□□□ -0.32
CDC42BPB-207ENST00000560492 TNPO2O14787 897 aaKnown RBP13.07□□□□□ -0.32
CDC42BPB-207ENST00000560492 EVI5O60447 810 aa13.07□□□□□ -0.32
CDC42BPB-207ENST00000560492 TFRCP02786 760 aaKnown RBP13.07□□□□□ -0.32
CDC42BPB-207ENST00000560492 ELNP15502 786 aa13.07□□□□□ -0.32
CDC42BPB-207ENST00000560492 FGFR2P21802 821 aa13.07□□□□□ -0.32
CDC42BPB-207ENST00000560492 NOL9Q5SY16 702 aaKnown RBP13.07□□□□□ -0.32
CDC42BPB-207ENST00000560492 DZIP1Q86YF9 867 aaKnown RBP13.07□□□□□ -0.32
CDC42BPB-207ENST00000560492 CEP126Q9P2H0 1117 aa13.07□□□□□ -0.32
CDC42BPB-207ENST00000560492 FAM198AQ9UFP1 575 aa13.07□□□□□ -0.32
CDC42BPB-207ENST00000560492 ZNF112Q9UJU3 913 aa13.07□□□□□ -0.32
CDC42BPB-207ENST00000560492 PTPRCP08575 1304 aa13.07□□□□□ -0.32
CDC42BPB-207ENST00000560492 ADGRA2Q96PE1 1338 aa13.07□□□□□ -0.32
CDC42BPB-207ENST00000560492 TRIM75PA6NK02 468 aa13.06□□□□□ -0.32
CDC42BPB-207ENST00000560492 BCRP11274 1271 aa13.06□□□□□ -0.32
CDC42BPB-207ENST00000560492 RGS3P49796 1198 aa13.06□□□□□ -0.32
CDC42BPB-207ENST00000560492 PICALMQ13492 652 aa13.06□□□□□ -0.32
CDC42BPB-207ENST00000560492 GPAT2Q6NUI2 795 aa13.06□□□□□ -0.32
CDC42BPB-207ENST00000560492 SCYL3Q8IZE3 742 aa13.06□□□□□ -0.32
CDC42BPB-207ENST00000560492 MRPL50Q8N5N7 158 aaKnown RBP13.06□□□□□ -0.32
CDC42BPB-207ENST00000560492 PHF12Q96QT6 1004 aa13.06□□□□□ -0.32
CDC42BPB-207ENST00000560492 DENND2AQ9ULE3 1009 aa13.06□□□□□ -0.32
CDC42BPB-207ENST00000560492 ATAD5Q96QE3 1844 aa13.06□□□□□ -0.32
CDC42BPB-207ENST00000560492 INHAP05111 366 aa13.05□□□□□ -0.32
CDC42BPB-207ENST00000560492 FLT3LGP49771 235 aa13.05□□□□□ -0.32
CDC42BPB-207ENST00000560492 MOGSQ13724 837 aa13.05□□□□□ -0.32
CDC42BPB-207ENST00000560492 ZFPM1Q8IX07 1006 aa13.05□□□□□ -0.32
CDC42BPB-207ENST00000560492 ZGPATQ8N5A5 531 aaKnown RBP13.05□□□□□ -0.32
CDC42BPB-207ENST00000560492 SLC17A8Q8NDX2 589 aa13.05□□□□□ -0.32
CDC42BPB-207ENST00000560492 COA7Q96BR5 231 aa13.05□□□□□ -0.32
CDC42BPB-207ENST00000560492 DEFB118Q96PH6 123 aa13.05□□□□□ -0.32
CDC42BPB-207ENST00000560492 USP44Q9H0E7 712 aa13.05□□□□□ -0.32
CDC42BPB-207ENST00000560492 ABCF2Q9UG63 623 aa13.05□□□□□ -0.32
CDC42BPB-207ENST00000560492 DOCK3Q8IZD9 2030 aa13.05□□□□□ -0.32
CDC42BPB-207ENST00000560492 PHIPQ8WWQ0 1821 aa13.04□□□□□ -0.32
CDC42BPB-207ENST00000560492 A0A0G2JLL6 359 aaPredicted RBP13.04□□□□□ -0.32
CDC42BPB-207ENST00000560492 SGPL1O95470 568 aa13.04□□□□□ -0.32
CDC42BPB-207ENST00000560492 UBTFL1P0CB47 393 aaPredicted RBP13.04□□□□□ -0.32
CDC42BPB-207ENST00000560492 PTPRAP18433 802 aa13.04□□□□□ -0.32
CDC42BPB-207ENST00000560492 PHKA1P46020 1223 aa13.04□□□□□ -0.32
CDC42BPB-207ENST00000560492 PRRT2Q7Z6L0 340 aaPredicted RBP13.04□□□□□ -0.32
CDC42BPB-207ENST00000560492 SLF2Q8IX21 1173 aa13.04□□□□□ -0.32
CDC42BPB-207ENST00000560492 ZBTB7BO15156 539 aaPredicted RBP13.03□□□□□ -0.32
CDC42BPB-207ENST00000560492 ENTPD3O75355 529 aa13.03□□□□□ -0.32
CDC42BPB-207ENST00000560492 CCDC84Q86UT8 332 aaPredicted RBP13.03□□□□□ -0.32
CDC42BPB-207ENST00000560492 ANKRD13CQ8N6S4 541 aa13.03□□□□□ -0.32
CDC42BPB-207ENST00000560492 DCBLD2Q96PD2 775 aa13.03□□□□□ -0.32
CDC42BPB-207ENST00000560492 SMC4Q9NTJ3 1288 aa13.03□□□□□ -0.32
CDC42BPB-207ENST00000560492 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.03□□□□□ -0.32
CDC42BPB-207ENST00000560492 ALPK3Q96L96 1907 aa13.03□□□□□ -0.32
CDC42BPB-207ENST00000560492 SZT2Q5T011 3432 aa13.02□□□□□ -0.32
CDC42BPB-207ENST00000560492 SEMA3EO15041 775 aa13.02□□□□□ -0.33
CDC42BPB-207ENST00000560492 RFX5P48382 616 aaPredicted RBP13.02□□□□□ -0.33
CDC42BPB-207ENST00000560492 ATG9AQ7Z3C6 839 aa13.02□□□□□ -0.33
CDC42BPB-207ENST00000560492 SSH1Q8WYL5 1049 aa13.02□□□□□ -0.33
CDC42BPB-207ENST00000560492 PNMA3Q9UL41 463 aa13.02□□□□□ -0.33
CDC42BPB-207ENST00000560492 AFG3L2Q9Y4W6 797 aa13.02□□□□□ -0.33
CDC42BPB-207ENST00000560492 DDTLA6NHG4 134 aaPredicted RBP13.01□□□□□ -0.33
CDC42BPB-207ENST00000560492 PHF20L1A8MW92 1017 aa13.01□□□□□ -0.33
CDC42BPB-207ENST00000560492 DLL1O00548 723 aa13.01□□□□□ -0.33
CDC42BPB-207ENST00000560492 SLURP2P0DP57 97 aa13.01□□□□□ -0.33
CDC42BPB-207ENST00000560492 BTDP43251 543 aa13.01□□□□□ -0.33
CDC42BPB-207ENST00000560492 SPTY2D1Q68D10 685 aaPredicted RBP13.01□□□□□ -0.33
CDC42BPB-207ENST00000560492 UBE2Q1Q7Z7E8 422 aa13.01□□□□□ -0.33
CDC42BPB-207ENST00000560492 C7orf61Q8IZ16 206 aa13.01□□□□□ -0.33
CDC42BPB-207ENST00000560492 PXYLP1Q8TE99 480 aa13.01□□□□□ -0.33
CDC42BPB-207ENST00000560492 PAWRQ96IZ0 340 aaKnown RBP13.01□□□□□ -0.33
CDC42BPB-207ENST00000560492 STAP2Q9UGK3 403 aa13.01□□□□□ -0.33
CDC42BPB-207ENST00000560492 PA2G4Q9UQ80 394 aaKnown RBP13.01□□□□□ -0.33
CDC42BPB-207ENST00000560492 SALL1Q9NSC2 1324 aa13.01□□□□□ -0.33
CDC42BPB-207ENST00000560492 FAM196BA6NMK8 535 aa13□□□□□ -0.33
CDC42BPB-207ENST00000560492 CTNND1O60716 968 aaKnown RBP13□□□□□ -0.33
CDC42BPB-207ENST00000560492 CIAO1O76071 339 aa13□□□□□ -0.33
CDC42BPB-207ENST00000560492 ADORA1P30542 326 aa13□□□□□ -0.33
CDC42BPB-207ENST00000560492 IL15P40933 162 aaPredicted RBP13□□□□□ -0.33
CDC42BPB-207ENST00000560492 CCDC102BQ68D86 513 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms