RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 CHST3Q7LGC8 479 aa17.03■□□□□ 0.32
ZEB1-218ENST00000560196 SGMS1Q86VZ5 419 aa17.03■□□□□ 0.32
ZEB1-218ENST00000560196 IGDCC4Q8TDY8 1250 aa17.03■□□□□ 0.32
ZEB1-218ENST00000560196 SH3RF3Q8TEJ3 882 aaPredicted RBP17.03■□□□□ 0.32
ZEB1-218ENST00000560196 PIM2Q9P1W9 311 aa17.03■□□□□ 0.32
ZEB1-218ENST00000560196 ZSWIM5Q9P217 1185 aa17.03■□□□□ 0.32
ZEB1-218ENST00000560196 ATF5Q9Y2D1 282 aaPredicted RBP17.03■□□□□ 0.32
ZEB1-218ENST00000560196 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.03■□□□□ 0.32
ZEB1-218ENST00000560196 ROBO3Q96MS0 1386 aa17.02■□□□□ 0.32
ZEB1-218ENST00000560196 DDX11L8A8MPP1 907 aa17.02■□□□□ 0.32
ZEB1-218ENST00000560196 KDM4AO75164 1064 aa17.02■□□□□ 0.32
ZEB1-218ENST00000560196 SLC3A2P08195 630 aaKnown RBP17.02■□□□□ 0.32
ZEB1-218ENST00000560196 PDCP20941 246 aa17.02■□□□□ 0.32
ZEB1-218ENST00000560196 PTMSP20962 102 aa17.02■□□□□ 0.32
ZEB1-218ENST00000560196 USP5P45974 858 aa17.02■□□□□ 0.32
ZEB1-218ENST00000560196 RHBDL3P58872 404 aa17.02■□□□□ 0.32
ZEB1-218ENST00000560196 HDLBPQ00341 1268 aaKnown RBP17.02■□□□□ 0.32
ZEB1-218ENST00000560196 SCRN1Q12765 414 aa17.02■□□□□ 0.32
ZEB1-218ENST00000560196 PKP1Q13835 747 aa17.02■□□□□ 0.32
ZEB1-218ENST00000560196 HHIPL2Q6UWX4 724 aa17.02■□□□□ 0.32
ZEB1-218ENST00000560196 SMARCC2Q8TAQ2 1214 aa17.02■□□□□ 0.32
ZEB1-218ENST00000560196 ESR2Q92731 530 aa17.02■□□□□ 0.32
ZEB1-218ENST00000560196 DBNDD1Q9H9R9 158 aa17.02■□□□□ 0.32
ZEB1-218ENST00000560196 ZNF219Q9P2Y4 722 aaPredicted RBP17.02■□□□□ 0.32
ZEB1-218ENST00000560196 DAGLAQ9Y4D2 1042 aa17.02■□□□□ 0.32
ZEB1-218ENST00000560196 CD2APQ9Y5K6 639 aa17.02■□□□□ 0.32
ZEB1-218ENST00000560196 LAMB1P07942 1786 aa17.02■□□□□ 0.31
ZEB1-218ENST00000560196 USP17L3A6NCW0 530 aa17.01■□□□□ 0.31
ZEB1-218ENST00000560196 USP17L4A6NCW7 530 aa17.01■□□□□ 0.31
ZEB1-218ENST00000560196 STK3Q13188 491 aa17.01■□□□□ 0.31
ZEB1-218ENST00000560196 SART3Q15020 963 aaKnown RBP17.01■□□□□ 0.31
ZEB1-218ENST00000560196 AOC3Q16853 763 aa17.01■□□□□ 0.31
ZEB1-218ENST00000560196 DACT2Q5SW24 774 aa17.01■□□□□ 0.31
ZEB1-218ENST00000560196 C12orf60Q5U649 245 aa17.01■□□□□ 0.31
ZEB1-218ENST00000560196 USP17L1Q7RTZ2 530 aa17.01■□□□□ 0.31
ZEB1-218ENST00000560196 TMTC2Q8N394 836 aa17.01■□□□□ 0.31
ZEB1-218ENST00000560196 NKX2-3Q8TAU0 364 aa17.01■□□□□ 0.31
ZEB1-218ENST00000560196 BRPF3Q9ULD4 1205 aa17.01■□□□□ 0.31
ZEB1-218ENST00000560196 KLF18A0A0U1RQI7 1052 aa17■□□□□ 0.31
ZEB1-218ENST00000560196 PPIP5K2O43314 1243 aa17■□□□□ 0.31
ZEB1-218ENST00000560196 STX6O43752 255 aa17■□□□□ 0.31
ZEB1-218ENST00000560196 DHX16O60231 1041 aaKnown RBP17■□□□□ 0.31
ZEB1-218ENST00000560196 SYT1P21579 422 aa17■□□□□ 0.31
ZEB1-218ENST00000560196 RCAN1P53805 252 aa17■□□□□ 0.31
ZEB1-218ENST00000560196 HMGN5P82970 282 aaKnown RBP17■□□□□ 0.31
ZEB1-218ENST00000560196 TMEM67Q5HYA8 995 aa17■□□□□ 0.31
ZEB1-218ENST00000560196 AMOTL1Q8IY63 956 aa17■□□□□ 0.31
ZEB1-218ENST00000560196 TEX11Q8IYF3 940 aa17■□□□□ 0.31
ZEB1-218ENST00000560196 NSUN7Q8NE18 718 aaKnown RBP17■□□□□ 0.31
ZEB1-218ENST00000560196 FBXW7Q969H0 707 aa17■□□□□ 0.31
ZEB1-218ENST00000560196 LY9Q9HBG7 655 aa17■□□□□ 0.31
ZEB1-218ENST00000560196 INCENPQ9NQS7 918 aa17■□□□□ 0.31
ZEB1-218ENST00000560196 GPHNQ9NQX3 736 aaPredicted RBP17■□□□□ 0.31
ZEB1-218ENST00000560196 MCM9Q9NXL9 1143 aa17■□□□□ 0.31
ZEB1-218ENST00000560196 TTF2Q9UNY4 1162 aaKnown RBP17■□□□□ 0.31
ZEB1-218ENST00000560196 ZNF646O15015 1829 aaPredicted RBP17■□□□□ 0.31
ZEB1-218ENST00000560196 NID2Q14112 1375 aa17■□□□□ 0.31
ZEB1-218ENST00000560196 BAZ2AQ9UIF9 1905 aaKnown RBP17■□□□□ 0.31
ZEB1-218ENST00000560196 IFIT3O14879 490 aaKnown RBP16.99■□□□□ 0.31
ZEB1-218ENST00000560196 BAG4O95429 457 aaKnown RBP16.99■□□□□ 0.31
ZEB1-218ENST00000560196 HPS5Q9UPZ3 1129 aa16.99■□□□□ 0.31
ZEB1-218ENST00000560196 CYP2D7A0A087X1C5 515 aa16.98■□□□□ 0.31
ZEB1-218ENST00000560196 GOLGA8BA8MQT2 603 aa16.98■□□□□ 0.31
ZEB1-218ENST00000560196 ZSCAN22P10073 491 aaPredicted RBP16.98■□□□□ 0.31
ZEB1-218ENST00000560196 PDE4BQ07343 736 aa16.98■□□□□ 0.31
ZEB1-218ENST00000560196 APOA5Q6Q788 366 aa16.98■□□□□ 0.31
ZEB1-218ENST00000560196 RGS22Q8NE09 1264 aa16.98■□□□□ 0.31
ZEB1-218ENST00000560196 TGFBRAP1Q8WUH2 860 aa16.98■□□□□ 0.31
ZEB1-218ENST00000560196 TEKT1Q969V4 418 aa16.98■□□□□ 0.31
ZEB1-218ENST00000560196 TOMM22Q9NS69 142 aa16.98■□□□□ 0.31
ZEB1-218ENST00000560196 KIF3AQ9Y496 699 aa16.98■□□□□ 0.31
ZEB1-218ENST00000560196 DDX60LQ5H9U9 1706 aaKnown RBP16.98■□□□□ 0.31
ZEB1-218ENST00000560196 NAV1Q8NEY1 1877 aa16.97■□□□□ 0.31
ZEB1-218ENST00000560196 ERICH2A1L162 156 aa16.97■□□□□ 0.31
ZEB1-218ENST00000560196 CTDNEP1O95476 244 aa16.97■□□□□ 0.31
ZEB1-218ENST00000560196 USP17L8P0C7I0 530 aa16.97■□□□□ 0.31
ZEB1-218ENST00000560196 PTGER2P43116 358 aa16.97■□□□□ 0.31
ZEB1-218ENST00000560196 SEC23AQ15436 765 aa16.97■□□□□ 0.31
ZEB1-218ENST00000560196 DALRD3Q5D0E6 543 aaKnown RBP16.97■□□□□ 0.31
ZEB1-218ENST00000560196 RRP12Q5JTH9 1297 aaKnown RBP16.97■□□□□ 0.31
ZEB1-218ENST00000560196 ZDHHC15Q96MV8 337 aa16.97■□□□□ 0.31
ZEB1-218ENST00000560196 KCNQ5Q9NR82 932 aa16.97■□□□□ 0.31
ZEB1-218ENST00000560196 MTMR6Q9Y217 621 aa16.97■□□□□ 0.31
ZEB1-218ENST00000560196 SCN9AQ15858 1988 aa16.97■□□□□ 0.31
ZEB1-218ENST00000560196 FLT1P17948 1338 aa16.96■□□□□ 0.31
ZEB1-218ENST00000560196 MYO3BQ8WXR4 1341 aa16.96■□□□□ 0.31
ZEB1-218ENST00000560196 PSME4Q14997 1843 aa16.96■□□□□ 0.31
ZEB1-218ENST00000560196 YDJCA8MPS7 323 aa16.96■□□□□ 0.31
ZEB1-218ENST00000560196 GOLGA6L22H0YM25 854 aa16.96■□□□□ 0.31
ZEB1-218ENST00000560196 CYP2D6P10635 497 aa16.96■□□□□ 0.31
ZEB1-218ENST00000560196 CCT2P78371 535 aaKnown RBP16.96■□□□□ 0.31
ZEB1-218ENST00000560196 WTAPQ15007 396 aa16.96■□□□□ 0.31
ZEB1-218ENST00000560196 LARP1BQ659C4 914 aaKnown RBP16.96■□□□□ 0.31
ZEB1-218ENST00000560196 IQCA1Q86XH1 822 aa16.96■□□□□ 0.31
ZEB1-218ENST00000560196 UBAC1Q9BSL1 405 aa16.96■□□□□ 0.31
ZEB1-218ENST00000560196 MXD3Q9BW11 206 aa16.96■□□□□ 0.31
ZEB1-218ENST00000560196 SERPINA10Q9UK55 444 aa16.96■□□□□ 0.31
ZEB1-218ENST00000560196 BRCA1P38398 1863 aaKnown RBP16.96■□□□□ 0.31
ZEB1-218ENST00000560196 FOCADQ5VW36 1801 aa16.96■□□□□ 0.3
ZEB1-218ENST00000560196 CDK5RAP2Q96SN8 1893 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms