RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 FRAT1Q92837 279 aaPredicted RBP7.83□□□□□ -1.16
CLPX-206ENST00000560166 ZNF496Q96IT1 587 aaPredicted RBP7.83□□□□□ -1.16
CLPX-206ENST00000560166 BCL2L13Q9BXK5 485 aa7.83□□□□□ -1.16
CLPX-206ENST00000560166 SEMA6BQ9H3T3 888 aa7.83□□□□□ -1.16
CLPX-206ENST00000560166 NOB1Q9ULX3 412 aaKnown RBP7.83□□□□□ -1.16
CLPX-206ENST00000560166 DDX19BQ9UMR2 479 aa7.83□□□□□ -1.16
CLPX-206ENST00000560166 KCPQ6ZWJ8 1503 aa7.83□□□□□ -1.16
CLPX-206ENST00000560166 USP17L15C9J2P7 530 aa7.82□□□□□ -1.16
CLPX-206ENST00000560166 USP17L10C9JJH3 530 aa7.82□□□□□ -1.16
CLPX-206ENST00000560166 USP17L13C9JLJ4 530 aa7.82□□□□□ -1.16
CLPX-206ENST00000560166 USP17L12C9JPN9 530 aa7.82□□□□□ -1.16
CLPX-206ENST00000560166 USP17L11C9JVI0 530 aa7.82□□□□□ -1.16
CLPX-206ENST00000560166 USP17L21D6R901 530 aa7.82□□□□□ -1.16
CLPX-206ENST00000560166 USP17L18D6R9N7 530 aa7.82□□□□□ -1.16
CLPX-206ENST00000560166 USP17L22D6RA61 530 aa7.82□□□□□ -1.16
CLPX-206ENST00000560166 USP17L17D6RBQ6 530 aa7.82□□□□□ -1.16
CLPX-206ENST00000560166 USP17L19D6RCP7 530 aa7.82□□□□□ -1.16
CLPX-206ENST00000560166 USP17L20D6RJB6 530 aa7.82□□□□□ -1.16
CLPX-206ENST00000560166 GPC1P35052 558 aa7.82□□□□□ -1.16
CLPX-206ENST00000560166 USP17L24Q0WX57 530 aa7.82□□□□□ -1.16
CLPX-206ENST00000560166 CRTC2Q53ET0 693 aaPredicted RBP7.82□□□□□ -1.16
CLPX-206ENST00000560166 INTS3Q68E01 1043 aaKnown RBP7.82□□□□□ -1.16
CLPX-206ENST00000560166 ADAM32Q8TC27 787 aa7.82□□□□□ -1.16
CLPX-206ENST00000560166 KLRG1Q96E93 195 aa7.82□□□□□ -1.16
CLPX-206ENST00000560166 CRBNQ96SW2 442 aa7.82□□□□□ -1.16
CLPX-206ENST00000560166 DDX21Q9NR30 783 aaKnown RBP eCLIP7.82□□□□□ -1.16
CLPX-206ENST00000560166 HYPKQ9NX55 129 aa7.82□□□□□ -1.16
CLPX-206ENST00000560166 KCNQ3O43525 872 aa7.81□□□□□ -1.16
CLPX-206ENST00000560166 TOMM70O94826 608 aa7.81□□□□□ -1.16
CLPX-206ENST00000560166 RLBP1P12271 317 aa7.81□□□□□ -1.16
CLPX-206ENST00000560166 RASA1P20936 1047 aa7.81□□□□□ -1.16
CLPX-206ENST00000560166 CCT4P50991 539 aaKnown RBP7.81□□□□□ -1.16
CLPX-206ENST00000560166 KCNQ4P56696 695 aa7.81□□□□□ -1.16
CLPX-206ENST00000560166 GRIN2CQ14957 1233 aa7.81□□□□□ -1.16
CLPX-206ENST00000560166 C20orf194Q5TEA3 1177 aa7.81□□□□□ -1.16
CLPX-206ENST00000560166 C16orf71Q8IYS4 520 aaPredicted RBP7.81□□□□□ -1.16
CLPX-206ENST00000560166 PLPP7Q8NBV4 271 aa7.81□□□□□ -1.16
CLPX-206ENST00000560166 EXOC6Q8TAG9 804 aa7.81□□□□□ -1.16
CLPX-206ENST00000560166 PIGBQ92521 554 aa7.81□□□□□ -1.16
CLPX-206ENST00000560166 ZNF592Q92610 1267 aa7.81□□□□□ -1.16
CLPX-206ENST00000560166 SMARCC1Q92922 1105 aaPredicted RBP7.81□□□□□ -1.16
CLPX-206ENST00000560166 SUV39H2Q9H5I1 410 aa7.81□□□□□ -1.16
CLPX-206ENST00000560166 UBR2Q8IWV8 1755 aa7.81□□□□□ -1.16
CLPX-206ENST00000560166 CICQ96RK0 1608 aaPredicted RBP7.81□□□□□ -1.16
CLPX-206ENST00000560166 TOGARAM1Q9Y4F4 1720 aa7.81□□□□□ -1.16
CLPX-206ENST00000560166 NHSQ6T4R5 1651 aa7.8□□□□□ -1.16
CLPX-206ENST00000560166 KRTAP4-8A0A0G2JLE6 195 aa7.8□□□□□ -1.16
CLPX-206ENST00000560166 FAM196BA6NMK8 535 aa7.8□□□□□ -1.16
CLPX-206ENST00000560166 ERVH48-1M5A8F1 160 aa7.8□□□□□ -1.16
CLPX-206ENST00000560166 HMGB2P26583 209 aaKnown RBP7.8□□□□□ -1.16
CLPX-206ENST00000560166 MCCD1P59942 119 aaPredicted RBP7.8□□□□□ -1.16
CLPX-206ENST00000560166 IRX6P78412 446 aaPredicted RBP7.8□□□□□ -1.16
CLPX-206ENST00000560166 SLC39A6Q13433 755 aa7.8□□□□□ -1.16
CLPX-206ENST00000560166 B4GALNT3Q6L9W6 998 aa7.8□□□□□ -1.16
CLPX-206ENST00000560166 PHTF2Q8N3S3 785 aa7.8□□□□□ -1.16
CLPX-206ENST00000560166 PANK1Q8TE04 598 aa7.8□□□□□ -1.16
CLPX-206ENST00000560166 EDARADDQ8WWZ3 215 aa7.8□□□□□ -1.16
CLPX-206ENST00000560166 CFHR5Q9BXR6 569 aa7.8□□□□□ -1.16
CLPX-206ENST00000560166 ATG3Q9NT62 314 aa7.8□□□□□ -1.16
CLPX-206ENST00000560166 WDR90Q96KV7 1748 aa7.79□□□□□ -1.16
CLPX-206ENST00000560166 STARD3NLO95772 234 aa7.79□□□□□ -1.16
CLPX-206ENST00000560166 DDX58O95786 925 aaKnown RBP7.79□□□□□ -1.16
CLPX-206ENST00000560166 NBPF20Q3BBV1 942 aa7.79□□□□□ -1.16
CLPX-206ENST00000560166 SYTL4Q96C24 671 aaPredicted RBP7.79□□□□□ -1.16
CLPX-206ENST00000560166 CCDC136Q96JN2 1154 aa7.79□□□□□ -1.16
CLPX-206ENST00000560166 GAS2L1Q99501 681 aaPredicted RBP7.79□□□□□ -1.16
CLPX-206ENST00000560166 RRAGCQ9HB90 399 aa7.79□□□□□ -1.16
CLPX-206ENST00000560166 ZBTB40Q9NUA8 1239 aa7.79□□□□□ -1.16
CLPX-206ENST00000560166 CHPF2Q9P2E5 772 aa7.79□□□□□ -1.16
CLPX-206ENST00000560166 GDF2Q9UK05 429 aaPredicted RBP7.79□□□□□ -1.16
CLPX-206ENST00000560166 BTAF1O14981 1849 aa7.78□□□□□ -1.16
CLPX-206ENST00000560166 ATP5J2-PTCD1G3V325 749 aa7.78□□□□□ -1.16
CLPX-206ENST00000560166 CHRNA4P43681 627 aa7.78□□□□□ -1.16
CLPX-206ENST00000560166 PTK7Q13308 1070 aa7.78□□□□□ -1.16
CLPX-206ENST00000560166 FKBP5Q13451 457 aaPredicted RBP7.78□□□□□ -1.16
CLPX-206ENST00000560166 TSGA10IPQ3SY00 556 aa7.78□□□□□ -1.16
CLPX-206ENST00000560166 SLC27A3Q5K4L6 730 aa7.78□□□□□ -1.16
CLPX-206ENST00000560166 SND1Q7KZF4 910 aaKnown RBP eCLIP7.78□□□□□ -1.16
CLPX-206ENST00000560166 LRP10Q7Z4F1 713 aa7.78□□□□□ -1.16
CLPX-206ENST00000560166 DZIP3Q86Y13 1208 aaKnown RBP7.78□□□□□ -1.16
CLPX-206ENST00000560166 ITPRIPQ8IWB1 547 aa7.78□□□□□ -1.16
CLPX-206ENST00000560166 TMEM57Q8N5G2 664 aa7.78□□□□□ -1.16
CLPX-206ENST00000560166 JMYQ8N9B5 988 aa7.78□□□□□ -1.16
CLPX-206ENST00000560166 FAM200AQ8TCP9 573 aa7.78□□□□□ -1.16
CLPX-206ENST00000560166 ZNF831Q5JPB2 1677 aa7.78□□□□□ -1.16
CLPX-206ENST00000560166 GOLGB1Q14789 3259 aaKnown RBP7.77□□□□□ -1.16
CLPX-206ENST00000560166 LAMB4A4D0S4 1761 aa7.77□□□□□ -1.17
CLPX-206ENST00000560166 PIK3R2O00459 728 aa7.77□□□□□ -1.17
CLPX-206ENST00000560166 ZBTB7BO15156 539 aaPredicted RBP7.77□□□□□ -1.17
CLPX-206ENST00000560166 HSPA1AP0DMV8 641 aaKnown RBP7.77□□□□□ -1.17
CLPX-206ENST00000560166 HSPA1BP0DMV9 641 aaKnown RBP7.77□□□□□ -1.17
CLPX-206ENST00000560166 EIF2S2P20042 333 aaKnown RBP7.77□□□□□ -1.17
CLPX-206ENST00000560166 EML3Q32P44 896 aa7.77□□□□□ -1.17
CLPX-206ENST00000560166 KSR2Q6VAB6 950 aa7.77□□□□□ -1.17
CLPX-206ENST00000560166 CENPQQ7L2Z9 268 aaPredicted RBP7.77□□□□□ -1.17
CLPX-206ENST00000560166 G2E3Q7L622 706 aa7.77□□□□□ -1.17
CLPX-206ENST00000560166 KRTAP19-1Q8IUB9 90 aa7.77□□□□□ -1.17
CLPX-206ENST00000560166 DNAAF4Q8WXU2 420 aa7.77□□□□□ -1.17
CLPX-206ENST00000560166 NMRK2Q9NPI5 230 aa7.77□□□□□ -1.17
CLPX-206ENST00000560166 ASAP1Q9ULH1 1129 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms