RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 PTPN12Q05209 780 aaKnown RBP6.47□□□□□ -1.37
SPG11-220ENST00000559933 MTX1Q13505 466 aa6.47□□□□□ -1.37
SPG11-220ENST00000559933 ERICH6BQ5W0A0 696 aa6.47□□□□□ -1.37
SPG11-220ENST00000559933 TSHZ3Q63HK5 1081 aa6.47□□□□□ -1.37
SPG11-220ENST00000559933 OLFM4Q6UX06 510 aa6.47□□□□□ -1.37
SPG11-220ENST00000559933 RPAP2Q8IXW5 612 aaPredicted RBP6.47□□□□□ -1.37
SPG11-220ENST00000559933 C16orf71Q8IYS4 520 aaPredicted RBP6.47□□□□□ -1.37
SPG11-220ENST00000559933 NLGN1Q8N2Q7 840 aa6.47□□□□□ -1.37
SPG11-220ENST00000559933 EPS8L1Q8TE68 723 aa6.47□□□□□ -1.37
SPG11-220ENST00000559933 CELF1Q92879 486 aaKnown RBP6.47□□□□□ -1.37
SPG11-220ENST00000559933 TSEN34Q9BSV6 310 aaKnown RBP6.47□□□□□ -1.37
SPG11-220ENST00000559933 NYXQ9GZU5 481 aa6.47□□□□□ -1.37
SPG11-220ENST00000559933 RWDD1Q9H446 243 aaPredicted RBP6.47□□□□□ -1.37
SPG11-220ENST00000559933 IL1RAPL2Q9NP60 686 aa6.47□□□□□ -1.37
SPG11-220ENST00000559933 NXF1Q9UBU9 619 aaKnown RBP6.47□□□□□ -1.37
SPG11-220ENST00000559933 PARP3Q9Y6F1 533 aa6.47□□□□□ -1.37
SPG11-220ENST00000559933 WTIPA6NIX2 430 aaPredicted RBP6.46□□□□□ -1.38
SPG11-220ENST00000559933 SNAP23O00161 211 aa6.46□□□□□ -1.38
SPG11-220ENST00000559933 OS9Q13438 667 aaPredicted RBP6.46□□□□□ -1.38
SPG11-220ENST00000559933 PPP1R26Q5T8A7 1209 aaPredicted RBP6.46□□□□□ -1.38
SPG11-220ENST00000559933 ANKRD45Q5TZF3 282 aa6.46□□□□□ -1.38
SPG11-220ENST00000559933 TPTE2Q6XPS3 522 aa6.46□□□□□ -1.38
SPG11-220ENST00000559933 CENPQQ7L2Z9 268 aaPredicted RBP6.46□□□□□ -1.38
SPG11-220ENST00000559933 ATG9AQ7Z3C6 839 aa6.46□□□□□ -1.38
SPG11-220ENST00000559933 LINC00528Q8N1L1 170 aa6.46□□□□□ -1.38
SPG11-220ENST00000559933 MEIOBQ8N635 442 aa6.46□□□□□ -1.38
SPG11-220ENST00000559933 LNPKQ9C0E8 428 aa6.46□□□□□ -1.38
SPG11-220ENST00000559933 CHMP4BQ9H444 224 aaKnown RBP6.46□□□□□ -1.38
SPG11-220ENST00000559933 DCTPP1Q9H773 170 aa6.46□□□□□ -1.38
SPG11-220ENST00000559933 TLR7Q9NYK1 1049 aaKnown RBP6.46□□□□□ -1.38
SPG11-220ENST00000559933 KIF13BQ9NQT8 1826 aa6.46□□□□□ -1.38
SPG11-220ENST00000559933 ZNF609O15014 1411 aa6.45□□□□□ -1.38
SPG11-220ENST00000559933 DLEC1Q9Y238 1755 aa6.45□□□□□ -1.38
SPG11-220ENST00000559933 ANKRD18BA2A2Z9 1011 aa6.45□□□□□ -1.38
SPG11-220ENST00000559933 SASH1O94885 1247 aa6.45□□□□□ -1.38
SPG11-220ENST00000559933 RGS3P49796 1198 aa6.45□□□□□ -1.38
SPG11-220ENST00000559933 RAB15P59190 212 aa6.45□□□□□ -1.38
SPG11-220ENST00000559933 TFCP2Q12800 502 aa6.45□□□□□ -1.38
SPG11-220ENST00000559933 NFX1Q12986 1120 aaKnown RBP6.45□□□□□ -1.38
SPG11-220ENST00000559933 IFIT5Q13325 482 aaKnown RBP6.45□□□□□ -1.38
SPG11-220ENST00000559933 CCDC57Q2TAC2 916 aa6.45□□□□□ -1.38
SPG11-220ENST00000559933 CCDC152Q4G0S7 254 aa6.45□□□□□ -1.38
SPG11-220ENST00000559933 TAF7LQ5H9L4 462 aa6.45□□□□□ -1.38
SPG11-220ENST00000559933 SLC10A5Q5PT55 438 aa6.45□□□□□ -1.38
SPG11-220ENST00000559933 SMC5Q8IY18 1101 aa6.45□□□□□ -1.38
SPG11-220ENST00000559933 NLRP3Q96P20 1036 aa6.45□□□□□ -1.38
SPG11-220ENST00000559933 GPR101Q96P66 508 aaPredicted RBP6.45□□□□□ -1.38
SPG11-220ENST00000559933 MTFR1LQ9H019 292 aa6.45□□□□□ -1.38
SPG11-220ENST00000559933 PPP1R1BQ9UD71 204 aaPredicted RBP6.45□□□□□ -1.38
SPG11-220ENST00000559933 A0A0G2JLW4 131 aa6.44□□□□□ -1.38
SPG11-220ENST00000559933 HMMRO75330 724 aa6.44□□□□□ -1.38
SPG11-220ENST00000559933 TAF5LO75529 589 aa6.44□□□□□ -1.38
SPG11-220ENST00000559933 KLRK1P26718 216 aa6.44□□□□□ -1.38
SPG11-220ENST00000559933 NUCB1Q02818 461 aa6.44□□□□□ -1.38
SPG11-220ENST00000559933 AAMPQ13685 434 aa6.44□□□□□ -1.38
SPG11-220ENST00000559933 SF3B3Q15393 1217 aaKnown RBP6.44□□□□□ -1.38
SPG11-220ENST00000559933 CRY2Q49AN0 593 aa6.44□□□□□ -1.38
SPG11-220ENST00000559933 C2CD5Q86YS7 1000 aa6.44□□□□□ -1.38
SPG11-220ENST00000559933 NPAS3Q8IXF0 933 aa6.44□□□□□ -1.38
SPG11-220ENST00000559933 BANK1Q8NDB2 785 aa6.44□□□□□ -1.38
SPG11-220ENST00000559933 NLGN2Q8NFZ4 835 aa6.44□□□□□ -1.38
SPG11-220ENST00000559933 RHPN1Q8TCX5 695 aa6.44□□□□□ -1.38
SPG11-220ENST00000559933 ZNF592Q92610 1267 aa6.44□□□□□ -1.38
SPG11-220ENST00000559933 IRF7Q92985 503 aa6.44□□□□□ -1.38
SPG11-220ENST00000559933 CCDC8Q9H0W5 538 aaPredicted RBP6.44□□□□□ -1.38
SPG11-220ENST00000559933 LRRC37AA6NMS7 1700 aa6.44□□□□□ -1.38
SPG11-220ENST00000559933 RTL9Q8NET4 1388 aa6.44□□□□□ -1.38
SPG11-220ENST00000559933 SLX4Q8IY92 1834 aa6.43□□□□□ -1.38
SPG11-220ENST00000559933 LTBP1Q14766 1721 aa6.43□□□□□ -1.38
SPG11-220ENST00000559933 ARAP2Q8WZ64 1704 aa6.43□□□□□ -1.38
SPG11-220ENST00000559933 ZBBXA8MT70 800 aa6.43□□□□□ -1.38
SPG11-220ENST00000559933 EYA2O00167 538 aa6.43□□□□□ -1.38
SPG11-220ENST00000559933 SRGNP10124 158 aa6.43□□□□□ -1.38
SPG11-220ENST00000559933 DPEP1P16444 411 aa6.43□□□□□ -1.38
SPG11-220ENST00000559933 HMGB2P26583 209 aaKnown RBP6.43□□□□□ -1.38
SPG11-220ENST00000559933 ADORA1P30542 326 aa6.43□□□□□ -1.38
SPG11-220ENST00000559933 G3BP1Q13283 466 aaKnown RBP eCLIP6.43□□□□□ -1.38
SPG11-220ENST00000559933 GRAPQ13588 217 aa6.43□□□□□ -1.38
SPG11-220ENST00000559933 INTS6LQ5JSJ4 861 aaKnown RBP6.43□□□□□ -1.38
SPG11-220ENST00000559933 METTL24Q5JXM2 366 aa6.43□□□□□ -1.38
SPG11-220ENST00000559933 LDHAL6AQ6ZMR3 332 aa6.43□□□□□ -1.38
SPG11-220ENST00000559933 CHD1LQ86WJ1 897 aa6.43□□□□□ -1.38
SPG11-220ENST00000559933 ANKRD18AQ8IVF6 992 aa6.43□□□□□ -1.38
SPG11-220ENST00000559933 GRAPLQ8TC17 118 aaPredicted RBP6.43□□□□□ -1.38
SPG11-220ENST00000559933 RPGRQ92834 1020 aaKnown RBP6.43□□□□□ -1.38
SPG11-220ENST00000559933 ZNF622Q969S3 477 aaKnown RBP eCLIP6.43□□□□□ -1.38
SPG11-220ENST00000559933 GCC1Q96CN9 775 aa6.43□□□□□ -1.38
SPG11-220ENST00000559933 BRIP1Q9BX63 1249 aa6.43□□□□□ -1.38
SPG11-220ENST00000559933 LRRCC1Q9C099 1032 aa6.43□□□□□ -1.38
SPG11-220ENST00000559933 COPRSQ9NQ92 184 aa6.43□□□□□ -1.38
SPG11-220ENST00000559933 CNNM1Q9NRU3 951 aa6.43□□□□□ -1.38
SPG11-220ENST00000559933 NOP58Q9Y2X3 529 aaKnown RBP6.43□□□□□ -1.38
SPG11-220ENST00000559933 NDUFB9Q9Y6M9 179 aa6.43□□□□□ -1.38
SPG11-220ENST00000559933 DUOX1Q9NRD9 1551 aa6.43□□□□□ -1.38
SPG11-220ENST00000559933 MAP4K4O95819 1239 aaPredicted RBP6.42□□□□□ -1.38
SPG11-220ENST00000559933 KCNA3P22001 575 aa6.42□□□□□ -1.38
SPG11-220ENST00000559933 POLD1P28340 1107 aa6.42□□□□□ -1.38
SPG11-220ENST00000559933 IGHMBP2P38935 993 aaKnown RBP6.42□□□□□ -1.38
SPG11-220ENST00000559933 GPSM2P81274 684 aa6.42□□□□□ -1.38
SPG11-220ENST00000559933 INSM1Q01101 510 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms