RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 HDAC9Q9UKV0 1011 aa13.82□□□□□ -0.2
TM2D3-208ENST00000559891 REC8O95072 547 aa13.82□□□□□ -0.2
TM2D3-208ENST00000559891 BAG3O95817 575 aa13.82□□□□□ -0.2
TM2D3-208ENST00000559891 DPY19L2Q6NUT2 758 aa13.82□□□□□ -0.2
TM2D3-208ENST00000559891 TCP10L2B9ZVM9 353 aa13.81□□□□□ -0.2
TM2D3-208ENST00000559891 NECTIN1Q15223 517 aa13.81□□□□□ -0.2
TM2D3-208ENST00000559891 KIF4BQ2VIQ3 1234 aa13.81□□□□□ -0.2
TM2D3-208ENST00000559891 SLF2Q8IX21 1173 aa13.81□□□□□ -0.2
TM2D3-208ENST00000559891 NBPF3Q9H094 633 aa13.81□□□□□ -0.2
TM2D3-208ENST00000559891 ZNF70Q9UC06 446 aaPredicted RBP13.81□□□□□ -0.2
TM2D3-208ENST00000559891 FAM198AQ9UFP1 575 aa13.81□□□□□ -0.2
TM2D3-208ENST00000559891 CYP21A2P08686 494 aa13.81□□□□□ -0.2
TM2D3-208ENST00000559891 POTEIP0CG38 1075 aa13.81□□□□□ -0.2
TM2D3-208ENST00000559891 POTEJP0CG39 1038 aa13.81□□□□□ -0.2
TM2D3-208ENST00000559891 USP5P45974 858 aa13.81□□□□□ -0.2
TM2D3-208ENST00000559891 NOL10Q9BSC4 688 aaKnown RBP13.81□□□□□ -0.2
TM2D3-208ENST00000559891 DSCC1Q9BVC3 393 aa13.81□□□□□ -0.2
TM2D3-208ENST00000559891 CRNKL1Q9BZJ0 848 aaKnown RBP13.81□□□□□ -0.2
TM2D3-208ENST00000559891 VEZTQ9HBM0 779 aa13.81□□□□□ -0.2
TM2D3-208ENST00000559891 FLT1P17948 1338 aa13.8□□□□□ -0.2
TM2D3-208ENST00000559891 ECM29Q5VYK3 1845 aa13.8□□□□□ -0.2
TM2D3-208ENST00000559891 USP17L12C9JPN9 530 aa13.8□□□□□ -0.2
TM2D3-208ENST00000559891 USP17L21D6R901 530 aa13.8□□□□□ -0.2
TM2D3-208ENST00000559891 H7C1D1 291 aa13.8□□□□□ -0.2
TM2D3-208ENST00000559891 CTDSPL2Q05D32 466 aa13.8□□□□□ -0.2
TM2D3-208ENST00000559891 CTR9Q6PD62 1173 aa13.8□□□□□ -0.2
TM2D3-208ENST00000559891 SLC27A2O14975 620 aa13.79□□□□□ -0.2
TM2D3-208ENST00000559891 TDO2P48775 406 aa13.79□□□□□ -0.2
TM2D3-208ENST00000559891 PLCD1P51178 756 aa13.79□□□□□ -0.2
TM2D3-208ENST00000559891 ADCK5Q3MIX3 580 aa13.79□□□□□ -0.2
TM2D3-208ENST00000559891 PRAMEF18Q5VWM3 479 aa13.79□□□□□ -0.2
TM2D3-208ENST00000559891 CREB3L3Q68CJ9 461 aa13.79□□□□□ -0.2
TM2D3-208ENST00000559891 SH3BP5LQ7L8J4 393 aa13.79□□□□□ -0.2
TM2D3-208ENST00000559891 MTMR14Q8NCE2 650 aa13.79□□□□□ -0.2
TM2D3-208ENST00000559891 L3MBTL3Q96JM7 780 aaPredicted RBP13.79□□□□□ -0.2
TM2D3-208ENST00000559891 MCM9Q9NXL9 1143 aa13.79□□□□□ -0.2
TM2D3-208ENST00000559891 POLR2AP24928 1970 aaKnown RBP13.79□□□□□ -0.2
TM2D3-208ENST00000559891 DCAF8L1A6NGE4 600 aa13.79□□□□□ -0.2
TM2D3-208ENST00000559891 MINDY4BA8MYZ0 360 aa13.79□□□□□ -0.2
TM2D3-208ENST00000559891 MCM4P33991 863 aa13.79□□□□□ -0.2
TM2D3-208ENST00000559891 HSPA4P34932 840 aa13.79□□□□□ -0.2
TM2D3-208ENST00000559891 SPDYE2Q495Y8 402 aa13.79□□□□□ -0.2
TM2D3-208ENST00000559891 STOX1Q6ZVD7 989 aa13.79□□□□□ -0.2
TM2D3-208ENST00000559891 KIF2CQ99661 725 aa13.79□□□□□ -0.2
TM2D3-208ENST00000559891 NAPBQ9H115 298 aa13.79□□□□□ -0.2
TM2D3-208ENST00000559891 RRAGCQ9HB90 399 aa13.79□□□□□ -0.2
TM2D3-208ENST00000559891 NMRK2Q9NPI5 230 aa13.79□□□□□ -0.2
TM2D3-208ENST00000559891 CHMP5Q9NZZ3 219 aa13.79□□□□□ -0.2
TM2D3-208ENST00000559891 HACL1Q9UJ83 578 aa13.79□□□□□ -0.2
TM2D3-208ENST00000559891 DDTLA6NHG4 134 aaPredicted RBP13.78□□□□□ -0.2
TM2D3-208ENST00000559891 CPA1P15085 419 aa13.78□□□□□ -0.2
TM2D3-208ENST00000559891 TBC1D10CQ8IV04 446 aa13.78□□□□□ -0.2
TM2D3-208ENST00000559891 DYNLL2Q96FJ2 89 aa13.78□□□□□ -0.2
TM2D3-208ENST00000559891 CNTNAP1P78357 1384 aa13.78□□□□□ -0.2
TM2D3-208ENST00000559891 FOCADQ5VW36 1801 aa13.78□□□□□ -0.2
TM2D3-208ENST00000559891 FAM196BA6NMK8 535 aa13.78□□□□□ -0.2
TM2D3-208ENST00000559891 IGSF3O75054 1194 aa13.78□□□□□ -0.2
TM2D3-208ENST00000559891 GNAT2P19087 354 aa13.78□□□□□ -0.2
TM2D3-208ENST00000559891 LMOD1P29536 600 aaPredicted RBP13.78□□□□□ -0.2
TM2D3-208ENST00000559891 ANGEL2Q5VTE6 544 aaKnown RBP13.78□□□□□ -0.2
TM2D3-208ENST00000559891 TMEM39BQ9GZU3 492 aa13.78□□□□□ -0.2
TM2D3-208ENST00000559891 SNX14Q9Y5W7 946 aa13.78□□□□□ -0.2
TM2D3-208ENST00000559891 RPAP1Q9BWH6 1393 aaPredicted RBP13.78□□□□□ -0.2
TM2D3-208ENST00000559891 EPHX2P34913 555 aa13.77□□□□□ -0.21
TM2D3-208ENST00000559891 TMED8Q6PL24 325 aaPredicted RBP13.77□□□□□ -0.21
TM2D3-208ENST00000559891 SLC44A5Q8NCS7 719 aa13.77□□□□□ -0.21
TM2D3-208ENST00000559891 TAF1DQ9H5J8 278 aaPredicted RBP13.77□□□□□ -0.21
TM2D3-208ENST00000559891 GGA3Q9NZ52 723 aa13.77□□□□□ -0.21
TM2D3-208ENST00000559891 U3KPZ7 1027 aaPredicted RBP13.77□□□□□ -0.21
TM2D3-208ENST00000559891 MYH1P12882 1939 aa13.77□□□□□ -0.21
TM2D3-208ENST00000559891 NAV1Q8NEY1 1877 aa13.77□□□□□ -0.21
TM2D3-208ENST00000559891 ZC3H4Q9UPT8 1303 aaKnown RBP13.76□□□□□ -0.21
TM2D3-208ENST00000559891 PRDM1O75626 825 aa13.76□□□□□ -0.21
TM2D3-208ENST00000559891 PLCG2P16885 1265 aa13.76□□□□□ -0.21
TM2D3-208ENST00000559891 ALX1Q15699 326 aa13.76□□□□□ -0.21
TM2D3-208ENST00000559891 EAPPQ56P03 285 aaPredicted RBP13.76□□□□□ -0.21
TM2D3-208ENST00000559891 IDI2Q9BXS1 227 aa13.76□□□□□ -0.21
TM2D3-208ENST00000559891 OSBPL5Q9H0X9 879 aaPredicted RBP13.76□□□□□ -0.21
TM2D3-208ENST00000559891 ADARB2Q9NS39 739 aaKnown RBP13.76□□□□□ -0.21
TM2D3-208ENST00000559891 ATP8A2Q9NTI2 1148 aa13.76□□□□□ -0.21
TM2D3-208ENST00000559891 DDX60LQ5H9U9 1706 aaKnown RBP13.76□□□□□ -0.21
TM2D3-208ENST00000559891 FSD2A1L4K1 749 aa13.76□□□□□ -0.21
TM2D3-208ENST00000559891 RBM25P49756 843 aaKnown RBP13.76□□□□□ -0.21
TM2D3-208ENST00000559891 PPARAQ07869 468 aa13.76□□□□□ -0.21
TM2D3-208ENST00000559891 FZD1Q9UP38 647 aa13.76□□□□□ -0.21
TM2D3-208ENST00000559891 TCEANC2Q96MN5 208 aa13.75□□□□□ -0.21
TM2D3-208ENST00000559891 NACAP1Q9BZK3 213 aa13.75□□□□□ -0.21
TM2D3-208ENST00000559891 NEDD4P46934 1319 aa13.75□□□□□ -0.21
TM2D3-208ENST00000559891 ZNF213O14771 459 aa13.75□□□□□ -0.21
TM2D3-208ENST00000559891 POLR3DP05423 398 aaPredicted RBP13.75□□□□□ -0.21
TM2D3-208ENST00000559891 FMR1Q06787 632 aaKnown RBP eCLIP13.75□□□□□ -0.21
TM2D3-208ENST00000559891 RASA3Q14644 834 aa13.75□□□□□ -0.21
TM2D3-208ENST00000559891 C12orf60Q5U649 245 aa13.75□□□□□ -0.21
TM2D3-208ENST00000559891 HSCBQ8IWL3 235 aa13.75□□□□□ -0.21
TM2D3-208ENST00000559891 ZSCAN29Q8IWY8 852 aaPredicted RBP13.75□□□□□ -0.21
TM2D3-208ENST00000559891 UPF3BQ9BZI7 483 aaKnown RBP13.75□□□□□ -0.21
TM2D3-208ENST00000559891 PGAP2Q9UHJ9 254 aa13.75□□□□□ -0.21
TM2D3-208ENST00000559891 SIPA1L1O43166 1804 aa13.74□□□□□ -0.21
TM2D3-208ENST00000559891 WDR90Q96KV7 1748 aa13.74□□□□□ -0.21
TM2D3-208ENST00000559891 E7EWF7 191 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 193.9 ms