RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 MYH1P12882 1939 aa22.72■■□□□ 1.23
CASC4-209ENST00000559222 SLC10A3P09131 477 aa22.71■■□□□ 1.23
CASC4-209ENST00000559222 PPP4CP60510 307 aa22.71■■□□□ 1.23
CASC4-209ENST00000559222 MAP3K11Q16584 847 aa22.71■■□□□ 1.23
CASC4-209ENST00000559222 MIGA2Q7L4E1 593 aa22.71■■□□□ 1.23
CASC4-209ENST00000559222 ARMC9Q7Z3E5 817 aa22.71■■□□□ 1.23
CASC4-209ENST00000559222 GPATCH3Q96I76 525 aa22.71■■□□□ 1.23
CASC4-209ENST00000559222 TTC41PQ6P2S7 1318 aa22.71■■□□□ 1.23
CASC4-209ENST00000559222 ENTPD3O75355 529 aa22.7■■□□□ 1.22
CASC4-209ENST00000559222 ADD2P35612 726 aa22.7■■□□□ 1.22
CASC4-209ENST00000559222 NUCB1Q02818 461 aa22.7■■□□□ 1.22
CASC4-209ENST00000559222 LAMB1P07942 1786 aa22.7■■□□□ 1.22
CASC4-209ENST00000559222 PPP1R12BO60237 982 aaPredicted RBP22.69■■□□□ 1.22
CASC4-209ENST00000559222 ECE1P42892 770 aa22.69■■□□□ 1.22
CASC4-209ENST00000559222 MKRN3Q13064 507 aaKnown RBP22.69■■□□□ 1.22
CASC4-209ENST00000559222 CHD1LQ86WJ1 897 aa22.69■■□□□ 1.22
CASC4-209ENST00000559222 MAPKAPK5Q8IW41 473 aa22.69■■□□□ 1.22
CASC4-209ENST00000559222 TGFBRAP1Q8WUH2 860 aa22.69■■□□□ 1.22
CASC4-209ENST00000559222 RIOK1Q9BRS2 568 aaKnown RBP22.69■■□□□ 1.22
CASC4-209ENST00000559222 NOL10Q9BSC4 688 aaKnown RBP22.69■■□□□ 1.22
CASC4-209ENST00000559222 OSBPL5Q9H0X9 879 aaPredicted RBP22.69■■□□□ 1.22
CASC4-209ENST00000559222 FLT1P17948 1338 aa22.68■■□□□ 1.22
CASC4-209ENST00000559222 PDE1AP54750 535 aa22.68■■□□□ 1.22
CASC4-209ENST00000559222 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.68■■□□□ 1.22
CASC4-209ENST00000559222 STAP2Q9UGK3 403 aa22.68■■□□□ 1.22
CASC4-209ENST00000559222 FAM196BA6NMK8 535 aa22.67■■□□□ 1.22
CASC4-209ENST00000559222 BAG3O95817 575 aa22.67■■□□□ 1.22
CASC4-209ENST00000559222 LCORLQ8N3X6 602 aa22.67■■□□□ 1.22
CASC4-209ENST00000559222 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.67■■□□□ 1.22
CASC4-209ENST00000559222 CNKSR2Q8WXI2 1034 aa22.67■■□□□ 1.22
CASC4-209ENST00000559222 ZBTB47Q9UFB7 747 aaPredicted RBP22.67■■□□□ 1.22
CASC4-209ENST00000559222 BAZ2AQ9UIF9 1905 aaKnown RBP22.67■■□□□ 1.22
CASC4-209ENST00000559222 COL2A1P02458 1487 aaPredicted RBP22.66■■□□□ 1.22
CASC4-209ENST00000559222 IGSF3O75054 1194 aa22.66■■□□□ 1.22
CASC4-209ENST00000559222 GLRX3O76003 335 aaKnown RBP22.66■■□□□ 1.22
CASC4-209ENST00000559222 PDE4AP27815 886 aa22.66■■□□□ 1.22
CASC4-209ENST00000559222 GJA5P36382 358 aa22.66■■□□□ 1.22
CASC4-209ENST00000559222 IREB2P48200 963 aaKnown RBP22.66■■□□□ 1.22
CASC4-209ENST00000559222 SLC4A8Q2Y0W8 1093 aa22.66■■□□□ 1.22
CASC4-209ENST00000559222 ZSCAN29Q8IWY8 852 aaPredicted RBP22.66■■□□□ 1.22
CASC4-209ENST00000559222 KBTBD3Q8NAB2 608 aa22.66■■□□□ 1.22
CASC4-209ENST00000559222 CSRNP1Q96S65 589 aa22.66■■□□□ 1.22
CASC4-209ENST00000559222 ATAD5Q96QE3 1844 aa22.66■■□□□ 1.22
CASC4-209ENST00000559222 DOCK1Q14185 1865 aa22.65■■□□□ 1.22
CASC4-209ENST00000559222 MAGEB6P1A0A0J9YX57 407 aa22.65■■□□□ 1.22
CASC4-209ENST00000559222 NPM3O75607 178 aaKnown RBP22.65■■□□□ 1.22
CASC4-209ENST00000559222 HSPA1AP0DMV8 641 aaKnown RBP22.65■■□□□ 1.22
CASC4-209ENST00000559222 HSPA1BP0DMV9 641 aaKnown RBP22.65■■□□□ 1.22
CASC4-209ENST00000559222 INPP5BP32019 993 aa22.65■■□□□ 1.22
CASC4-209ENST00000559222 VGLL4Q14135 290 aa22.65■■□□□ 1.22
CASC4-209ENST00000559222 ZKSCAN4Q969J2 545 aaPredicted RBP22.65■■□□□ 1.22
CASC4-209ENST00000559222 WRNIP1Q96S55 665 aa22.65■■□□□ 1.22
CASC4-209ENST00000559222 ARMT1Q9H993 441 aa22.65■■□□□ 1.22
CASC4-209ENST00000559222 ELP3Q9H9T3 547 aa22.65■■□□□ 1.22
CASC4-209ENST00000559222 SAP30BPQ9UHR5 308 aaKnown RBP22.65■■□□□ 1.22
CASC4-209ENST00000559222 ERC2O15083 957 aa22.64■■□□□ 1.21
CASC4-209ENST00000559222 PLCG2P16885 1265 aa22.64■■□□□ 1.21
CASC4-209ENST00000559222 KIF23Q02241 960 aaPredicted RBP22.64■■□□□ 1.21
CASC4-209ENST00000559222 EVX2Q03828 476 aa22.64■■□□□ 1.21
CASC4-209ENST00000559222 PLEKHM2Q8IWE5 1019 aa22.64■■□□□ 1.21
CASC4-209ENST00000559222 CCDC102AQ96A19 550 aa22.64■■□□□ 1.21
CASC4-209ENST00000559222 SNCAIPQ9Y6H5 919 aa22.64■■□□□ 1.21
CASC4-209ENST00000559222 MBD4O95243 580 aa22.63■■□□□ 1.21
CASC4-209ENST00000559222 NOGQ13253 232 aa22.63■■□□□ 1.21
CASC4-209ENST00000559222 ANKRD13AQ8IZ07 590 aa22.63■■□□□ 1.21
CASC4-209ENST00000559222 ZNF341Q9BYN7 854 aa22.63■■□□□ 1.21
CASC4-209ENST00000559222 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.63■■□□□ 1.217e-14■■□□□ 14.2
CASC4-209ENST00000559222 PUS7LQ9H0K6 701 aaKnown RBP22.63■■□□□ 1.21
CASC4-209ENST00000559222 PHIPQ8WWQ0 1821 aa22.62■■□□□ 1.21
CASC4-209ENST00000559222 PRKAB2O43741 272 aa22.62■■□□□ 1.21
CASC4-209ENST00000559222 MAP3K9P80192 1104 aa22.62■■□□□ 1.21
CASC4-209ENST00000559222 SPRYD7Q5W111 196 aa22.62■■□□□ 1.21
CASC4-209ENST00000559222 DCAF15Q66K64 600 aa22.62■■□□□ 1.21
CASC4-209ENST00000559222 SDR42E1Q8WUS8 393 aa22.62■■□□□ 1.21
CASC4-209ENST00000559222 SLC10A4Q96EP9 437 aa22.62■■□□□ 1.21
CASC4-209ENST00000559222 WNK4Q96J92 1243 aa22.62■■□□□ 1.21
CASC4-209ENST00000559222 PALD1Q9ULE6 856 aa22.62■■□□□ 1.21
CASC4-209ENST00000559222 PHF20L1A8MW92 1017 aa22.61■■□□□ 1.21
CASC4-209ENST00000559222 MAP2K2P36507 400 aa22.61■■□□□ 1.21
CASC4-209ENST00000559222 UBE3CQ15386 1083 aa22.61■■□□□ 1.21
CASC4-209ENST00000559222 WBP1LQ9NX94 342 aa22.61■■□□□ 1.21
CASC4-209ENST00000559222 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.61■■□□□ 1.21
CASC4-209ENST00000559222 ZNF112Q9UJU3 913 aa22.61■■□□□ 1.21
CASC4-209ENST00000559222 USP5P45974 858 aa22.6■■□□□ 1.21
CASC4-209ENST00000559222 RRP1BQ14684 758 aaKnown RBP22.6■■□□□ 1.21
CASC4-209ENST00000559222 TMED8Q6PL24 325 aaPredicted RBP22.6■■□□□ 1.21
CASC4-209ENST00000559222 OSBP2Q969R2 916 aa22.6■■□□□ 1.21
CASC4-209ENST00000559222 FSD1Q9BTV5 496 aa22.6■■□□□ 1.21
CASC4-209ENST00000559222 DNAJC18Q9H819 358 aa22.6■■□□□ 1.21
CASC4-209ENST00000559222 M0R2C6 588 aa22.59■■□□□ 1.21
CASC4-209ENST00000559222 FOXN1O15353 648 aa22.59■■□□□ 1.21
CASC4-209ENST00000559222 RNF113AO15541 343 aaKnown RBP22.59■■□□□ 1.21
CASC4-209ENST00000559222 MAP3K10Q02779 954 aa22.59■■□□□ 1.21
CASC4-209ENST00000559222 COL13A1Q5TAT6 717 aaPredicted RBP22.59■■□□□ 1.21
CASC4-209ENST00000559222 SKAP1Q86WV1 359 aa22.59■■□□□ 1.21
CASC4-209ENST00000559222 OPTNQ96CV9 577 aa22.59■■□□□ 1.21
CASC4-209ENST00000559222 HOOK2Q96ED9 719 aa22.59■■□□□ 1.21
CASC4-209ENST00000559222 SEC62Q99442 399 aaKnown RBP22.59■■□□□ 1.21
CASC4-209ENST00000559222 SMIM22K7EJ46 135 aa22.58■■□□□ 1.21
CASC4-209ENST00000559222 SHROOM1Q2M3G4 852 aaPredicted RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms