RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 MAPKAPK5Q8IW41 473 aa13.17□□□□□ -0.3
TPM1-217ENST00000559108 SULF1Q8IWU6 871 aa13.17□□□□□ -0.3
TPM1-217ENST00000559108 TEX11Q8IYF3 940 aa13.17□□□□□ -0.3
TPM1-217ENST00000559108 SDR42E1Q8WUS8 393 aa13.17□□□□□ -0.3
TPM1-217ENST00000559108 APPBP2Q92624 585 aa13.17□□□□□ -0.3
TPM1-217ENST00000559108 RPAP1Q9BWH6 1393 aaPredicted RBP13.17□□□□□ -0.3
TPM1-217ENST00000559108 COL2A1P02458 1487 aaPredicted RBP13.16□□□□□ -0.3
TPM1-217ENST00000559108 LAMA4Q16363 1823 aa13.16□□□□□ -0.3
TPM1-217ENST00000559108 MYO1BO43795 1136 aa13.16□□□□□ -0.3
TPM1-217ENST00000559108 IGSF3O75054 1194 aa13.16□□□□□ -0.3
TPM1-217ENST00000559108 SLC4A8Q2Y0W8 1093 aa13.16□□□□□ -0.3
TPM1-217ENST00000559108 FKBP1CQ5VVH2 108 aa13.16□□□□□ -0.3
TPM1-217ENST00000559108 FAM83AQ86UY5 434 aa13.16□□□□□ -0.3
TPM1-217ENST00000559108 SLF2Q8IX21 1173 aa13.16□□□□□ -0.3
TPM1-217ENST00000559108 TGFBRAP1Q8WUH2 860 aa13.16□□□□□ -0.3
TPM1-217ENST00000559108 STRBPQ96SI9 672 aaKnown RBP13.16□□□□□ -0.3
TPM1-217ENST00000559108 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.16□□□□□ -0.3
TPM1-217ENST00000559108 EPB41L4AQ9HCS5 686 aaPredicted RBP13.16□□□□□ -0.3
TPM1-217ENST00000559108 GPAA1O43292 621 aa13.15□□□□□ -0.3
TPM1-217ENST00000559108 CYP2D6P10635 497 aa13.15□□□□□ -0.3
TPM1-217ENST00000559108 VPS53Q5VIR6 699 aa13.15□□□□□ -0.3
TPM1-217ENST00000559108 FAM151AQ8WW52 585 aa13.15□□□□□ -0.3
TPM1-217ENST00000559108 OSBPL5Q9H0X9 879 aaPredicted RBP13.15□□□□□ -0.3
TPM1-217ENST00000559108 ZNF408Q9H9D4 720 aa13.15□□□□□ -0.3
TPM1-217ENST00000559108 SAP30BPQ9UHR5 308 aaKnown RBP13.15□□□□□ -0.3
TPM1-217ENST00000559108 PHIPQ8WWQ0 1821 aa13.15□□□□□ -0.3
TPM1-217ENST00000559108 MYH8P13535 1937 aa13.15□□□□□ -0.3
TPM1-217ENST00000559108 DOCK1Q14185 1865 aa13.14□□□□□ -0.31
TPM1-217ENST00000559108 CYP2D7A0A087X1C5 515 aa13.14□□□□□ -0.31
TPM1-217ENST00000559108 FAM196BA6NMK8 535 aa13.14□□□□□ -0.31
TPM1-217ENST00000559108 GSG1L2A8MUP6 293 aa13.14□□□□□ -0.31
TPM1-217ENST00000559108 ENTPD3O75355 529 aa13.14□□□□□ -0.31
TPM1-217ENST00000559108 CELF2O95319 508 aaKnown RBP13.14□□□□□ -0.31
TPM1-217ENST00000559108 BAG3O95817 575 aa13.14□□□□□ -0.31
TPM1-217ENST00000559108 ZFYP08048 801 aaPredicted RBP13.14□□□□□ -0.31
TPM1-217ENST00000559108 RRP1BQ14684 758 aaKnown RBP13.14□□□□□ -0.31
TPM1-217ENST00000559108 BMP2KLQ5H9B9 411 aa13.14□□□□□ -0.31
TPM1-217ENST00000559108 DNAJC18Q9H819 358 aa13.14□□□□□ -0.31
TPM1-217ENST00000559108 DCP1AQ9NPI6 582 aaPredicted RBP13.14□□□□□ -0.31
TPM1-217ENST00000559108 PALD1Q9ULE6 856 aa13.14□□□□□ -0.31
TPM1-217ENST00000559108 NPM3O75607 178 aaKnown RBP13.13□□□□□ -0.31
TPM1-217ENST00000559108 CHMLP26374 656 aa13.13□□□□□ -0.31
TPM1-217ENST00000559108 PRKG1Q13976 671 aa13.13□□□□□ -0.31
TPM1-217ENST00000559108 SHROOM1Q2M3G4 852 aaPredicted RBP13.13□□□□□ -0.31
TPM1-217ENST00000559108 ZSCAN25Q6NSZ9 544 aa13.13□□□□□ -0.31
TPM1-217ENST00000559108 TMED8Q6PL24 325 aaPredicted RBP13.13□□□□□ -0.31
TPM1-217ENST00000559108 TMOD2Q9NZR1 351 aa13.13□□□□□ -0.31
TPM1-217ENST00000559108 PPP2R3BQ9Y5P8 575 aa13.13□□□□□ -0.31
TPM1-217ENST00000559108 PLCD1P51178 756 aa13.12□□□□□ -0.31
TPM1-217ENST00000559108 CWC27Q6UX04 472 aaKnown RBP13.12□□□□□ -0.31
TPM1-217ENST00000559108 MIGA2Q7L4E1 593 aa13.12□□□□□ -0.31
TPM1-217ENST00000559108 AIDAQ96BJ3 306 aa13.12□□□□□ -0.31
TPM1-217ENST00000559108 TACC3Q9Y6A5 838 aa13.12□□□□□ -0.31
TPM1-217ENST00000559108 SLC4A4Q9Y6R1 1079 aa13.12□□□□□ -0.31
TPM1-217ENST00000559108 THSD7BQ9C0I4 1608 aa13.12□□□□□ -0.31
TPM1-217ENST00000559108 GREB1LQ9C091 1923 aaPredicted RBP13.11□□□□□ -0.31
TPM1-217ENST00000559108 USP2O75604 605 aaPredicted RBP13.11□□□□□ -0.31
TPM1-217ENST00000559108 PLCG2P16885 1265 aa13.11□□□□□ -0.31
TPM1-217ENST00000559108 TNNI2P48788 182 aa13.11□□□□□ -0.31
TPM1-217ENST00000559108 APLP1P51693 650 aa13.11□□□□□ -0.31
TPM1-217ENST00000559108 JAG1P78504 1218 aa13.11□□□□□ -0.31
TPM1-217ENST00000559108 TNFAIP1Q13829 316 aa13.11□□□□□ -0.31
TPM1-217ENST00000559108 CLMNQ96JQ2 1002 aa13.11□□□□□ -0.31
TPM1-217ENST00000559108 NOL10Q9BSC4 688 aaKnown RBP13.11□□□□□ -0.31
TPM1-217ENST00000559108 CRNKL1Q9BZJ0 848 aaKnown RBP13.11□□□□□ -0.31
TPM1-217ENST00000559108 HELLSQ9NRZ9 838 aa13.11□□□□□ -0.31
TPM1-217ENST00000559108 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.11□□□□□ -0.31
TPM1-217ENST00000559108 PTPRFP10586 1907 aa13.11□□□□□ -0.31
TPM1-217ENST00000559108 UBE2Q2LH0YL09 131 aa13.1□□□□□ -0.31
TPM1-217ENST00000559108 USP5P45974 858 aa13.1□□□□□ -0.31
TPM1-217ENST00000559108 MAP3K10Q02779 954 aa13.1□□□□□ -0.31
TPM1-217ENST00000559108 MCMDC2Q4G0Z9 681 aa13.1□□□□□ -0.31
TPM1-217ENST00000559108 SLC44A5Q8NCS7 719 aa13.1□□□□□ -0.31
TPM1-217ENST00000559108 NKX2-3Q8TAU0 364 aa13.1□□□□□ -0.31
TPM1-217ENST00000559108 CSRNP1Q96S65 589 aa13.1□□□□□ -0.31
TPM1-217ENST00000559108 GBA2Q9HCG7 927 aaPredicted RBP13.1□□□□□ -0.31
TPM1-217ENST00000559108 CCDC171Q6TFL3 1326 aa13.1□□□□□ -0.31
TPM1-217ENST00000559108 TMEM88BA6NKF7 163 aa13.09□□□□□ -0.31
TPM1-217ENST00000559108 PHF20L1A8MW92 1017 aa13.09□□□□□ -0.31
TPM1-217ENST00000559108 HSPA6P17066 643 aa13.09□□□□□ -0.31
TPM1-217ENST00000559108 INPP5BP32019 993 aa13.09□□□□□ -0.31
TPM1-217ENST00000559108 CTR9Q6PD62 1173 aa13.09□□□□□ -0.31
TPM1-217ENST00000559108 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.09□□□□□ -0.31
TPM1-217ENST00000559108 SAPCD2Q86UD0 394 aa13.09□□□□□ -0.31
TPM1-217ENST00000559108 METTL16Q86W50 562 aaKnown RBP13.09□□□□□ -0.31
TPM1-217ENST00000559108 CNKSR2Q8WXI2 1034 aa13.09□□□□□ -0.31
TPM1-217ENST00000559108 DYNLL2Q96FJ2 89 aa13.09□□□□□ -0.31
TPM1-217ENST00000559108 NBPF3Q9H094 633 aa13.09□□□□□ -0.31
TPM1-217ENST00000559108 DIAPH3Q9NSV4 1193 aa13.09□□□□□ -0.31
TPM1-217ENST00000559108 ANGEL1Q9UNK9 670 aaKnown RBP13.09□□□□□ -0.31
TPM1-217ENST00000559108 TLL2Q9Y6L7 1015 aa13.09□□□□□ -0.31
TPM1-217ENST00000559108 USP17L12C9JPN9 530 aa13.08□□□□□ -0.32
TPM1-217ENST00000559108 USP17L21D6R901 530 aa13.08□□□□□ -0.32
TPM1-217ENST00000559108 SGSM2O43147 1006 aa13.08□□□□□ -0.32
TPM1-217ENST00000559108 HSPD1P10809 573 aaKnown RBP13.08□□□□□ -0.32
TPM1-217ENST00000559108 PTH1RQ03431 593 aa13.08□□□□□ -0.32
TPM1-217ENST00000559108 GABPAQ06546 454 aa13.08□□□□□ -0.32
TPM1-217ENST00000559108 MAP3K11Q16584 847 aa13.08□□□□□ -0.32
TPM1-217ENST00000559108 LDLRAD1Q5T700 205 aa13.08□□□□□ -0.32
TPM1-217ENST00000559108 IFNL3Q8IZI9 196 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms