RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 PPP1R12BO60237 982 aaPredicted RBP14.76□□□□□ -0.05
TPM1-216ENST00000558910 SLC10A3P09131 477 aa14.76□□□□□ -0.05
TPM1-216ENST00000558910 MAP2K2P36507 400 aa14.76□□□□□ -0.05
TPM1-216ENST00000558910 TNNI2P48788 182 aa14.76□□□□□ -0.05
TPM1-216ENST00000558910 TNFAIP1Q13829 316 aa14.76□□□□□ -0.05
TPM1-216ENST00000558910 SUPT20HL1Q3ZLR7 823 aa14.76□□□□□ -0.05
TPM1-216ENST00000558910 TNS4Q8IZW8 715 aa14.76□□□□□ -0.05
TPM1-216ENST00000558910 HS3ST6Q96QI5 342 aa14.76□□□□□ -0.05
TPM1-216ENST00000558910 USP40Q9NVE5 1235 aa14.76□□□□□ -0.05
TPM1-216ENST00000558910 HMG20BQ9P0W2 317 aa14.76□□□□□ -0.05
TPM1-216ENST00000558910 MYH13Q9UKX3 1938 aa14.75□□□□□ -0.05
TPM1-216ENST00000558910 TRPA1O75762 1119 aa14.75□□□□□ -0.05
TPM1-216ENST00000558910 FKBP1BP68106 108 aa14.75□□□□□ -0.05
TPM1-216ENST00000558910 ARSIQ5FYB1 569 aa14.75□□□□□ -0.05
TPM1-216ENST00000558910 ERICH6Q7L0X2 663 aa14.75□□□□□ -0.05
TPM1-216ENST00000558910 SPATA5Q8NB90 893 aa14.75□□□□□ -0.05
TPM1-216ENST00000558910 KHSRPQ92945 711 aaKnown RBP eCLIP14.75□□□□□ -0.05
TPM1-216ENST00000558910 SLC10A4Q96EP9 437 aa14.75□□□□□ -0.05
TPM1-216ENST00000558910 ZDHHC15Q96MV8 337 aa14.75□□□□□ -0.05
TPM1-216ENST00000558910 GPHNQ9NQX3 736 aaPredicted RBP14.75□□□□□ -0.05
TPM1-216ENST00000558910 NDUFB9Q9Y6M9 179 aa14.75□□□□□ -0.05
TPM1-216ENST00000558910 SSC5DA1L4H1 1573 aa14.74□□□□□ -0.05
TPM1-216ENST00000558910 SEMA3EO15041 775 aa14.74□□□□□ -0.05
TPM1-216ENST00000558910 MCAMP43121 646 aa14.74□□□□□ -0.05
TPM1-216ENST00000558910 HDLBPQ00341 1268 aaKnown RBP14.74□□□□□ -0.05
TPM1-216ENST00000558910 PICALMQ13492 652 aa14.74□□□□□ -0.05
TPM1-216ENST00000558910 CCDC158Q5M9N0 1113 aa14.74□□□□□ -0.05
TPM1-216ENST00000558910 CDC42EP5Q6NZY7 148 aa14.74□□□□□ -0.05
TPM1-216ENST00000558910 HHIPL2Q6UWX4 724 aa14.74□□□□□ -0.05
TPM1-216ENST00000558910 MIGA2Q7L4E1 593 aa14.74□□□□□ -0.05
TPM1-216ENST00000558910 AACSQ86V21 672 aa14.74□□□□□ -0.05
TPM1-216ENST00000558910 ELP3Q9H9T3 547 aa14.74□□□□□ -0.05
TPM1-216ENST00000558910 PLSCR2Q9NRY7 297 aa14.74□□□□□ -0.05
TPM1-216ENST00000558910 SUGT1Q9Y2Z0 365 aa14.74□□□□□ -0.05
TPM1-216ENST00000558910 PAPPA2Q9BXP8 1791 aa14.74□□□□□ -0.05
TPM1-216ENST00000558910 ARAP2Q8WZ64 1704 aa14.73□□□□□ -0.05
TPM1-216ENST00000558910 USP2O75604 605 aaPredicted RBP14.73□□□□□ -0.05
TPM1-216ENST00000558910 IREB2P48200 963 aaKnown RBP14.73□□□□□ -0.05
TPM1-216ENST00000558910 NFIAQ12857 509 aa14.73□□□□□ -0.05
TPM1-216ENST00000558910 ZGPATQ8N5A5 531 aaKnown RBP14.73□□□□□ -0.05
TPM1-216ENST00000558910 BBXQ8WY36 941 aaPredicted RBP14.73□□□□□ -0.05
TPM1-216ENST00000558910 EAF2Q96CJ1 260 aaPredicted RBP14.73□□□□□ -0.05
TPM1-216ENST00000558910 CSRNP1Q96S65 589 aa14.73□□□□□ -0.05
TPM1-216ENST00000558910 ZBTB40Q9NUA8 1239 aa14.73□□□□□ -0.05
TPM1-216ENST00000558910 LRP2BPQ9P2M1 347 aa14.73□□□□□ -0.05
TPM1-216ENST00000558910 DBNLQ9UJU6 430 aaKnown RBP14.73□□□□□ -0.05
TPM1-216ENST00000558910 PPP2R3BQ9Y5P8 575 aa14.73□□□□□ -0.05
TPM1-216ENST00000558910 UQCRFS1P1P0C7P4 283 aa14.72□□□□□ -0.05
TPM1-216ENST00000558910 BTDP43251 543 aa14.72□□□□□ -0.05
TPM1-216ENST00000558910 ZAP70P43403 619 aa14.72□□□□□ -0.05
TPM1-216ENST00000558910 MECOMQ03112 1051 aa14.72□□□□□ -0.05
TPM1-216ENST00000558910 SPTY2D1Q68D10 685 aaPredicted RBP14.72□□□□□ -0.05
TPM1-216ENST00000558910 ZFPM1Q8IX07 1006 aa14.72□□□□□ -0.05
TPM1-216ENST00000558910 SIRT2Q8IXJ6 389 aa14.72□□□□□ -0.05
TPM1-216ENST00000558910 TEPSINQ96N21 525 aa14.72□□□□□ -0.05
TPM1-216ENST00000558910 NOP58Q9Y2X3 529 aaKnown RBP14.72□□□□□ -0.05
TPM1-216ENST00000558910 HMMRO75330 724 aa14.71□□□□□ -0.05
TPM1-216ENST00000558910 ARID4AP29374 1257 aaPredicted RBP14.71□□□□□ -0.05
TPM1-216ENST00000558910 FOXK1P85037 733 aa14.71□□□□□ -0.05
TPM1-216ENST00000558910 DSG2Q14126 1118 aa14.71□□□□□ -0.05
TPM1-216ENST00000558910 ZSCAN29Q8IWY8 852 aaPredicted RBP14.71□□□□□ -0.05
TPM1-216ENST00000558910 RNF186Q9NXI6 227 aa14.71□□□□□ -0.05
TPM1-216ENST00000558910 SALL1Q9NSC2 1324 aa14.7□□□□□ -0.06
TPM1-216ENST00000558910 SMARCA5O60264 1052 aaPredicted RBP14.7□□□□□ -0.06
TPM1-216ENST00000558910 SLURP2P0DP57 97 aa14.7□□□□□ -0.06
TPM1-216ENST00000558910 LDLRAD1Q5T700 205 aa14.7□□□□□ -0.06
TPM1-216ENST00000558910 RPAP2Q8IXW5 612 aaPredicted RBP14.7□□□□□ -0.06
TPM1-216ENST00000558910 RHPN1Q8TCX5 695 aa14.7□□□□□ -0.06
TPM1-216ENST00000558910 GPR108Q9NPR9 543 aa14.7□□□□□ -0.06
TPM1-216ENST00000558910 ECM29Q5VYK3 1845 aa14.7□□□□□ -0.06
TPM1-216ENST00000558910 TBC1D8O95759 1140 aa14.69□□□□□ -0.06
TPM1-216ENST00000558910 RGS3P49796 1198 aa14.69□□□□□ -0.06
TPM1-216ENST00000558910 RRP1P56182 461 aaKnown RBP14.69□□□□□ -0.06
TPM1-216ENST00000558910 PDE3AQ14432 1141 aa14.69□□□□□ -0.06
TPM1-216ENST00000558910 SPRYD7Q5W111 196 aa14.69□□□□□ -0.06
TPM1-216ENST00000558910 ERC1Q8IUD2 1116 aa14.69□□□□□ -0.06
TPM1-216ENST00000558910 PLPP6Q8IY26 295 aa14.69□□□□□ -0.06
TPM1-216ENST00000558910 ZKSCAN4Q969J2 545 aaPredicted RBP14.69□□□□□ -0.06
TPM1-216ENST00000558910 WNK4Q96J92 1243 aa14.69□□□□□ -0.06
TPM1-216ENST00000558910 WRNIP1Q96S55 665 aa14.69□□□□□ -0.06
TPM1-216ENST00000558910 MRIQ9BWK5 157 aa14.69□□□□□ -0.06
TPM1-216ENST00000558910 PIH1D3Q9NQM4 214 aaKnown RBP14.69□□□□□ -0.06
TPM1-216ENST00000558910 FAM198AQ9UFP1 575 aa14.69□□□□□ -0.06
TPM1-216ENST00000558910 MROH7-TTC4A0A0A0MT08 1334 aa14.68□□□□□ -0.06
TPM1-216ENST00000558910 CYP2E1P05181 493 aaPredicted RBP14.68□□□□□ -0.06
TPM1-216ENST00000558910 IFIT2P09913 472 aaKnown RBP14.68□□□□□ -0.06
TPM1-216ENST00000558910 GJA5P36382 358 aa14.68□□□□□ -0.06
TPM1-216ENST00000558910 SLC4A8Q2Y0W8 1093 aa14.68□□□□□ -0.06
TPM1-216ENST00000558910 HSP90AB4PQ58FF6 505 aa14.68□□□□□ -0.06
TPM1-216ENST00000558910 SLF2Q8IX21 1173 aa14.68□□□□□ -0.06
TPM1-216ENST00000558910 ANKRD13AQ8IZ07 590 aa14.68□□□□□ -0.06
TPM1-216ENST00000558910 ZNF384Q8TF68 577 aa14.68□□□□□ -0.06
TPM1-216ENST00000558910 FAM151AQ8WW52 585 aa14.68□□□□□ -0.06
TPM1-216ENST00000558910 NSUN4Q96CB9 384 aaKnown RBP14.68□□□□□ -0.06
TPM1-216ENST00000558910 OPTNQ96CV9 577 aa14.68□□□□□ -0.06
TPM1-216ENST00000558910 DNAJC2Q99543 621 aaKnown RBP14.68□□□□□ -0.06
TPM1-216ENST00000558910 CRISPLD2Q9H0B8 497 aa14.68□□□□□ -0.06
TPM1-216ENST00000558910 CHMP4BQ9H444 224 aaKnown RBP14.68□□□□□ -0.06
TPM1-216ENST00000558910 PRDM10Q9NQV6 1147 aa14.68□□□□□ -0.06
TPM1-216ENST00000558910 THSD7BQ9C0I4 1608 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms