RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 GLTPD2A6NH11 291 aa8.98□□□□□ -0.97
TRAF3-206ENST00000558880 NRG2O14511 850 aaPredicted RBP8.98□□□□□ -0.97
TRAF3-206ENST00000558880 SURF6O75683 361 aaKnown RBP8.98□□□□□ -0.97
TRAF3-206ENST00000558880 BBOX1O75936 387 aa8.98□□□□□ -0.97
TRAF3-206ENST00000558880 HSP90B1P14625 803 aaKnown RBP8.98□□□□□ -0.97
TRAF3-206ENST00000558880 RFC5P40937 340 aa8.98□□□□□ -0.97
TRAF3-206ENST00000558880 GPSM2P81274 684 aa8.98□□□□□ -0.97
TRAF3-206ENST00000558880 CHRNDQ07001 517 aa8.98□□□□□ -0.97
TRAF3-206ENST00000558880 TFCP2Q12800 502 aa8.98□□□□□ -0.97
TRAF3-206ENST00000558880 LDHAL6AQ6ZMR3 332 aa8.98□□□□□ -0.97
TRAF3-206ENST00000558880 TXNRD3Q86VQ6 643 aa8.98□□□□□ -0.97
TRAF3-206ENST00000558880 ANKRD18AQ8IVF6 992 aa8.98□□□□□ -0.97
TRAF3-206ENST00000558880 SP8Q8IXZ3 490 aa8.98□□□□□ -0.97
TRAF3-206ENST00000558880 OTUD7AQ8TE49 926 aaPredicted RBP8.98□□□□□ -0.97
TRAF3-206ENST00000558880 ZNF622Q969S3 477 aaKnown RBP eCLIP8.98□□□□□ -0.97
TRAF3-206ENST00000558880 PPP4R2Q9NY27 417 aa8.98□□□□□ -0.97
TRAF3-206ENST00000558880 PODXL2Q9NZ53 605 aa8.98□□□□□ -0.97
TRAF3-206ENST00000558880 HDAC5Q9UQL6 1122 aa8.98□□□□□ -0.97
TRAF3-206ENST00000558880 SLX4Q8IY92 1834 aa8.98□□□□□ -0.97
TRAF3-206ENST00000558880 LRRC37AA6NMS7 1700 aa8.97□□□□□ -0.97
TRAF3-206ENST00000558880 DLEC1Q9Y238 1755 aa8.97□□□□□ -0.97
TRAF3-206ENST00000558880 NFKBIEO00221 500 aa8.97□□□□□ -0.97
TRAF3-206ENST00000558880 NPHP1O15259 732 aa8.97□□□□□ -0.97
TRAF3-206ENST00000558880 SMARCA5O60264 1052 aaPredicted RBP8.97□□□□□ -0.97
TRAF3-206ENST00000558880 TAF5LO75529 589 aa8.97□□□□□ -0.97
TRAF3-206ENST00000558880 ALDH1B1P30837 517 aa8.97□□□□□ -0.97
TRAF3-206ENST00000558880 TTLL6Q8N841 843 aa8.97□□□□□ -0.97
TRAF3-206ENST00000558880 RHPN1Q8TCX5 695 aa8.97□□□□□ -0.97
TRAF3-206ENST00000558880 RPGRQ92834 1020 aaKnown RBP8.97□□□□□ -0.97
TRAF3-206ENST00000558880 CNKSR1Q969H4 720 aa8.97□□□□□ -0.97
TRAF3-206ENST00000558880 EAF2Q96CJ1 260 aaPredicted RBP8.97□□□□□ -0.97
TRAF3-206ENST00000558880 GPR101Q96P66 508 aaPredicted RBP8.97□□□□□ -0.97
TRAF3-206ENST00000558880 CDC5LQ99459 802 aaKnown RBP8.97□□□□□ -0.97
TRAF3-206ENST00000558880 RTFDC1Q9BY42 306 aaPredicted RBP8.97□□□□□ -0.97
TRAF3-206ENST00000558880 TLR7Q9NYK1 1049 aaKnown RBP8.97□□□□□ -0.97
TRAF3-206ENST00000558880 POLLQ9UGP5 575 aa8.97□□□□□ -0.97
TRAF3-206ENST00000558880 COL4A5P29400 1685 aa8.97□□□□□ -0.97
TRAF3-206ENST00000558880 C21orf2O43822 256 aa8.96□□□□□ -0.98
TRAF3-206ENST00000558880 PDE8BO95263 885 aa8.96□□□□□ -0.98
TRAF3-206ENST00000558880 IL15P40933 162 aaPredicted RBP8.96□□□□□ -0.98
TRAF3-206ENST00000558880 SH3BP2P78314 561 aa8.96□□□□□ -0.98
TRAF3-206ENST00000558880 PRR20EP86478 221 aa8.96□□□□□ -0.98
TRAF3-206ENST00000558880 PRR20CP86479 221 aa8.96□□□□□ -0.98
TRAF3-206ENST00000558880 PRR20DP86480 221 aa8.96□□□□□ -0.98
TRAF3-206ENST00000558880 PRR20BP86481 221 aa8.96□□□□□ -0.98
TRAF3-206ENST00000558880 PRR20AP86496 221 aa8.96□□□□□ -0.98
TRAF3-206ENST00000558880 LAPTM4AQ15012 233 aa8.96□□□□□ -0.98
TRAF3-206ENST00000558880 TBC1D16Q8TBP0 767 aa8.96□□□□□ -0.98
TRAF3-206ENST00000558880 MRGPRX2Q96LB1 330 aa8.96□□□□□ -0.98
TRAF3-206ENST00000558880 CCDC88AQ3V6T2 1871 aa8.96□□□□□ -0.98
TRAF3-206ENST00000558880 FAM187AA6NFU0 413 aa8.95□□□□□ -0.98
TRAF3-206ENST00000558880 WNT7AO00755 349 aa8.95□□□□□ -0.98
TRAF3-206ENST00000558880 HMMRO75330 724 aa8.95□□□□□ -0.98
TRAF3-206ENST00000558880 NEFLP07196 543 aa8.95□□□□□ -0.98
TRAF3-206ENST00000558880 ADORA1P30542 326 aa8.95□□□□□ -0.98
TRAF3-206ENST00000558880 IGHMBP2P38935 993 aaKnown RBP8.95□□□□□ -0.98
TRAF3-206ENST00000558880 WNT7BP56706 349 aa8.95□□□□□ -0.98
TRAF3-206ENST00000558880 TIMM10P62072 90 aa8.95□□□□□ -0.98
TRAF3-206ENST00000558880 NUCB1Q02818 461 aa8.95□□□□□ -0.98
TRAF3-206ENST00000558880 CYP4X1Q8N118 509 aa8.95□□□□□ -0.98
TRAF3-206ENST00000558880 GCC1Q96CN9 775 aa8.95□□□□□ -0.98
TRAF3-206ENST00000558880 RWDD1Q9H446 243 aaPredicted RBP8.95□□□□□ -0.98
TRAF3-206ENST00000558880 IL1RAPL2Q9NP60 686 aa8.95□□□□□ -0.98
TRAF3-206ENST00000558880 GPR108Q9NPR9 543 aa8.95□□□□□ -0.98
TRAF3-206ENST00000558880 DBNLQ9UJU6 430 aaKnown RBP8.95□□□□□ -0.98
TRAF3-206ENST00000558880 CNTNAP1P78357 1384 aa8.95□□□□□ -0.98
TRAF3-206ENST00000558880 ZNF609O15014 1411 aa8.95□□□□□ -0.98
TRAF3-206ENST00000558880 MYH3P11055 1940 aa8.94□□□□□ -0.98
TRAF3-206ENST00000558880 RAB11FIP3O75154 756 aa8.94□□□□□ -0.98
TRAF3-206ENST00000558880 USP17L8P0C7I0 530 aa8.94□□□□□ -0.98
TRAF3-206ENST00000558880 LMNB1P20700 586 aa8.94□□□□□ -0.98
TRAF3-206ENST00000558880 VEGFBP49765 207 aa8.94□□□□□ -0.98
TRAF3-206ENST00000558880 TNNI3KQ59H18 835 aa8.94□□□□□ -0.98
TRAF3-206ENST00000558880 C15orf52Q6ZUT6 534 aaKnown RBP8.94□□□□□ -0.98
TRAF3-206ENST00000558880 TMC4Q7Z404 712 aa8.94□□□□□ -0.98
TRAF3-206ENST00000558880 ZNF511Q8NB15 262 aa8.94□□□□□ -0.98
TRAF3-206ENST00000558880 KIF1BPQ96EK5 621 aa8.94□□□□□ -0.98
TRAF3-206ENST00000558880 MPHOSPH8Q99549 860 aa8.94□□□□□ -0.98
TRAF3-206ENST00000558880 DBNDD2Q9BQY9 259 aa8.94□□□□□ -0.98
TRAF3-206ENST00000558880 CNNM1Q9NRU3 951 aa8.94□□□□□ -0.98
TRAF3-206ENST00000558880 FPGT-TNNI3KV9GXZ4 949 aa8.94□□□□□ -0.98
TRAF3-206ENST00000558880 MROH5Q6ZUA9 1318 aa8.94□□□□□ -0.98
TRAF3-206ENST00000558880 TIAM2Q8IVF5 1701 aa8.94□□□□□ -0.98
TRAF3-206ENST00000558880 A0A1B0GUL7 405 aa8.93□□□□□ -0.98
TRAF3-206ENST00000558880 TTC24A2A3L6 582 aaPredicted RBP8.93□□□□□ -0.98
TRAF3-206ENST00000558880 POTECB2RU33 542 aa8.93□□□□□ -0.98
TRAF3-206ENST00000558880 APBB1O00213 710 aa8.93□□□□□ -0.98
TRAF3-206ENST00000558880 RGS19P49795 217 aa8.93□□□□□ -0.98
TRAF3-206ENST00000558880 G3BP1Q13283 466 aaKnown RBP eCLIP8.93□□□□□ -0.98
TRAF3-206ENST00000558880 UBE4AQ14139 1066 aa8.93□□□□□ -0.98
TRAF3-206ENST00000558880 METTL24Q5JXM2 366 aa8.93□□□□□ -0.98
TRAF3-206ENST00000558880 CENPQQ7L2Z9 268 aaPredicted RBP8.93□□□□□ -0.98
TRAF3-206ENST00000558880 FBXO33Q7Z6M2 555 aa8.93□□□□□ -0.98
TRAF3-206ENST00000558880 CHD1LQ86WJ1 897 aa8.93□□□□□ -0.98
TRAF3-206ENST00000558880 EHBP1Q8NDI1 1231 aa8.93□□□□□ -0.98
TRAF3-206ENST00000558880 FAM84BQ96KN1 310 aaPredicted RBP8.93□□□□□ -0.98
TRAF3-206ENST00000558880 CCDC8Q9H0W5 538 aaPredicted RBP8.93□□□□□ -0.98
TRAF3-206ENST00000558880 HMX1Q9NP08 348 aaPredicted RBP8.93□□□□□ -0.98
TRAF3-206ENST00000558880 ZNF804BA4D1E1 1349 aa8.93□□□□□ -0.98
TRAF3-206ENST00000558880 XDHP47989 1333 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms