RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 CNKSR2Q8WXI2 1034 aa13.42□□□□□ -0.26
PBX1-213ENST00000558796 HOOK2Q96ED9 719 aa13.42□□□□□ -0.26
PBX1-213ENST00000558796 NOL10Q9BSC4 688 aaKnown RBP13.42□□□□□ -0.26
PBX1-213ENST00000558796 DCTPP1Q9H773 170 aa13.42□□□□□ -0.26
PBX1-213ENST00000558796 AATFQ9NY61 560 aaKnown RBP eCLIP13.42□□□□□ -0.26
PBX1-213ENST00000558796 ATRNL1Q5VV63 1379 aa13.42□□□□□ -0.26
PBX1-213ENST00000558796 CA12O43570 354 aa13.41□□□□□ -0.26
PBX1-213ENST00000558796 ENTPD3O75355 529 aa13.41□□□□□ -0.26
PBX1-213ENST00000558796 TRPA1O75762 1119 aa13.41□□□□□ -0.26
PBX1-213ENST00000558796 CYP7A1P22680 504 aa13.41□□□□□ -0.26
PBX1-213ENST00000558796 MAP3K9P80192 1104 aa13.41□□□□□ -0.26
PBX1-213ENST00000558796 SH3BP5LQ7L8J4 393 aa13.41□□□□□ -0.26
PBX1-213ENST00000558796 TEX11Q8IYF3 940 aa13.41□□□□□ -0.26
PBX1-213ENST00000558796 MAGEB6Q8N7X4 407 aa13.41□□□□□ -0.26
PBX1-213ENST00000558796 ZKSCAN4Q969J2 545 aaPredicted RBP13.41□□□□□ -0.26
PBX1-213ENST00000558796 OPTNQ96CV9 577 aa13.41□□□□□ -0.26
PBX1-213ENST00000558796 EDC3Q96F86 508 aaKnown RBP13.41□□□□□ -0.26
PBX1-213ENST00000558796 ZNF341Q9BYN7 854 aa13.41□□□□□ -0.26
PBX1-213ENST00000558796 PRDM10Q9NQV6 1147 aa13.41□□□□□ -0.26
PBX1-213ENST00000558796 RNF186Q9NXI6 227 aa13.41□□□□□ -0.26
PBX1-213ENST00000558796 CSADQ9Y600 493 aa13.41□□□□□ -0.26
PBX1-213ENST00000558796 DDTLA6NHG4 134 aaPredicted RBP13.4□□□□□ -0.26
PBX1-213ENST00000558796 UNCXA6NJT0 531 aa13.4□□□□□ -0.26
PBX1-213ENST00000558796 GOLIM4O00461 696 aa13.4□□□□□ -0.26
PBX1-213ENST00000558796 SLURP2P0DP57 97 aa13.4□□□□□ -0.26
PBX1-213ENST00000558796 ZBTB48P10074 688 aaPredicted RBP13.4□□□□□ -0.26
PBX1-213ENST00000558796 INPP5BP32019 993 aa13.4□□□□□ -0.26
PBX1-213ENST00000558796 SREBF2Q12772 1141 aa13.4□□□□□ -0.26
PBX1-213ENST00000558796 MIGA1Q8NAN2 632 aa13.4□□□□□ -0.26
PBX1-213ENST00000558796 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.4□□□□□ -0.26
PBX1-213ENST00000558796 OTUD5Q96G74 571 aa13.4□□□□□ -0.26
PBX1-213ENST00000558796 BOLA2Q9H3K6 86 aa13.4□□□□□ -0.26
PBX1-213ENST00000558796 SNCAIPQ9Y6H5 919 aa13.4□□□□□ -0.26
PBX1-213ENST00000558796 COL2A1P02458 1487 aaPredicted RBP13.4□□□□□ -0.26
PBX1-213ENST00000558796 BAG3O95817 575 aa13.39□□□□□ -0.27
PBX1-213ENST00000558796 DYNLL1P63167 89 aaKnown RBP13.39□□□□□ -0.27
PBX1-213ENST00000558796 MAP3K12Q12852 859 aa13.39□□□□□ -0.27
PBX1-213ENST00000558796 TTF1Q15361 905 aaPredicted RBP13.39□□□□□ -0.27
PBX1-213ENST00000558796 TSHZ3Q63HK5 1081 aa13.39□□□□□ -0.27
PBX1-213ENST00000558796 REM2Q8IYK8 340 aaPredicted RBP13.39□□□□□ -0.27
PBX1-213ENST00000558796 OSBPL5Q9H0X9 879 aaPredicted RBP13.39□□□□□ -0.27
PBX1-213ENST00000558796 SAGE1Q9NXZ1 904 aa13.39□□□□□ -0.27
PBX1-213ENST00000558796 SUPT16HQ9Y5B9 1047 aaKnown RBP13.39□□□□□ -0.27
PBX1-213ENST00000558796 FAM196BA6NMK8 535 aa13.38□□□□□ -0.27
PBX1-213ENST00000558796 PLCG2P16885 1265 aa13.38□□□□□ -0.27
PBX1-213ENST00000558796 ATP5JP18859 108 aa13.38□□□□□ -0.27
PBX1-213ENST00000558796 MAPKAPK5Q8IW41 473 aa13.38□□□□□ -0.27
PBX1-213ENST00000558796 TNS4Q8IZW8 715 aa13.38□□□□□ -0.27
PBX1-213ENST00000558796 EXOC6Q8TAG9 804 aa13.38□□□□□ -0.27
PBX1-213ENST00000558796 TGFBRAP1Q8WUH2 860 aa13.38□□□□□ -0.27
PBX1-213ENST00000558796 PAG1Q9NWQ8 432 aa13.38□□□□□ -0.27
PBX1-213ENST00000558796 FLT1P17948 1338 aa13.38□□□□□ -0.27
PBX1-213ENST00000558796 MANSC4A6NHS7 340 aaPredicted RBP13.37□□□□□ -0.27
PBX1-213ENST00000558796 SPDYE5A6NIY4 337 aa13.37□□□□□ -0.27
PBX1-213ENST00000558796 NPM3O75607 178 aaKnown RBP13.37□□□□□ -0.27
PBX1-213ENST00000558796 MAP4K4O95819 1239 aaPredicted RBP13.37□□□□□ -0.27
PBX1-213ENST00000558796 PDE6AP16499 860 aa13.37□□□□□ -0.27
PBX1-213ENST00000558796 TM4SF4P48230 202 aa13.37□□□□□ -0.27
PBX1-213ENST00000558796 PPP4CP60510 307 aa13.37□□□□□ -0.27
PBX1-213ENST00000558796 HAUS7Q99871 368 aa13.37□□□□□ -0.27
PBX1-213ENST00000558796 ZSWIM8A7E2V4 1837 aa13.36□□□□□ -0.27
PBX1-213ENST00000558796 LOC285556D6RIA3 1793 aa13.36□□□□□ -0.27
PBX1-213ENST00000558796 IGF2BP3O00425 579 aaKnown RBP eCLIP13.36□□□□□ -0.27
PBX1-213ENST00000558796 IGSF3O75054 1194 aa13.36□□□□□ -0.27
PBX1-213ENST00000558796 TBC1D8O95759 1140 aa13.36□□□□□ -0.27
PBX1-213ENST00000558796 SLC4A8Q2Y0W8 1093 aa13.36□□□□□ -0.27
PBX1-213ENST00000558796 SLC9C2Q5TAH2 1124 aa13.36□□□□□ -0.27
PBX1-213ENST00000558796 ERO1BQ86YB8 467 aa13.36□□□□□ -0.27
PBX1-213ENST00000558796 IFNL1Q8IU54 200 aa13.36□□□□□ -0.27
PBX1-213ENST00000558796 GPATCH3Q96I76 525 aa13.36□□□□□ -0.27
PBX1-213ENST00000558796 ECHDC1Q9NTX5 307 aa13.36□□□□□ -0.27
PBX1-213ENST00000558796 SAP30BPQ9UHR5 308 aaKnown RBP13.36□□□□□ -0.27
PBX1-213ENST00000558796 ZNF112Q9UJU3 913 aa13.36□□□□□ -0.27
PBX1-213ENST00000558796 ZNF532Q9HCE3 1301 aa13.36□□□□□ -0.27
PBX1-213ENST00000558796 PHF20L1A8MW92 1017 aa13.35□□□□□ -0.27
PBX1-213ENST00000558796 IRX6P78412 446 aaPredicted RBP13.35□□□□□ -0.27
PBX1-213ENST00000558796 SLFNL1Q499Z3 407 aa13.35□□□□□ -0.27
PBX1-213ENST00000558796 NOL9Q5SY16 702 aaKnown RBP13.35□□□□□ -0.27
PBX1-213ENST00000558796 OTUD7AQ8TE49 926 aaPredicted RBP13.35□□□□□ -0.27
PBX1-213ENST00000558796 MS4A4AQ96JQ5 239 aa13.35□□□□□ -0.27
PBX1-213ENST00000558796 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.35□□□□□ -0.27
PBX1-213ENST00000558796 CCL15-CCL14A0A0B4J2E2 113 aa13.34□□□□□ -0.27
PBX1-213ENST00000558796 MAGEB6P1A0A0J9YX57 407 aa13.34□□□□□ -0.27
PBX1-213ENST00000558796 TCRBV5S4A2TA0A5A2 114 aa13.34□□□□□ -0.27
PBX1-213ENST00000558796 IRF6O14896 467 aa13.34□□□□□ -0.27
PBX1-213ENST00000558796 CHGBP05060 677 aa13.34□□□□□ -0.27
PBX1-213ENST00000558796 USP5P45974 858 aa13.34□□□□□ -0.27
PBX1-213ENST00000558796 GTF2A2P52657 109 aa13.34□□□□□ -0.27
PBX1-213ENST00000558796 PPIL2Q13356 520 aa13.34□□□□□ -0.27
PBX1-213ENST00000558796 HDAC1Q13547 482 aaPredicted RBP13.34□□□□□ -0.27
PBX1-213ENST00000558796 CCL15Q16663 113 aa13.34□□□□□ -0.27
PBX1-213ENST00000558796 BRI3BPQ8WY22 251 aa13.34□□□□□ -0.27
PBX1-213ENST00000558796 PTPN18Q99952 460 aa13.34□□□□□ -0.27
PBX1-213ENST00000558796 R3HDMLQ9H3Y0 253 aa13.34□□□□□ -0.27
PBX1-213ENST00000558796 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.34□□□□□ -0.27
PBX1-213ENST00000558796 PALD1Q9ULE6 856 aa13.34□□□□□ -0.27
PBX1-213ENST00000558796 MGAMO43451 1857 aa13.33□□□□□ -0.27
PBX1-213ENST00000558796 ADD2P35612 726 aa13.33□□□□□ -0.28
PBX1-213ENST00000558796 INHBEP58166 350 aa13.33□□□□□ -0.28
PBX1-213ENST00000558796 MAP3K10Q02779 954 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms