RNA–Protein interactions for RNA: ENST00000558455.1

TMOD3-203, Transcript of tropomodulin 3, humanhuman

TSL 3

Gene TMOD3, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-203ENST00000558455 PLCG2P16885 1265 aa25.42■■□□□ 1.66
TMOD3-203ENST00000558455 MKRN3Q13064 507 aaKnown RBP25.42■■□□□ 1.66
TMOD3-203ENST00000558455 TMED8Q6PL24 325 aaPredicted RBP25.42■■□□□ 1.66
TMOD3-203ENST00000558455 SH3BP5LQ7L8J4 393 aa25.42■■□□□ 1.66
TMOD3-203ENST00000558455 ZSCAN29Q8IWY8 852 aaPredicted RBP25.42■■□□□ 1.66
TMOD3-203ENST00000558455 ANKRD45Q5TZF3 282 aa25.41■■□□□ 1.66
TMOD3-203ENST00000558455 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.41■■□□□ 1.66
TMOD3-203ENST00000558455 MIGA1Q8NAN2 632 aa25.41■■□□□ 1.66
TMOD3-203ENST00000558455 OTUD7AQ8TE49 926 aaPredicted RBP25.41■■□□□ 1.66
TMOD3-203ENST00000558455 CSRNP1Q96S65 589 aa25.41■■□□□ 1.66
TMOD3-203ENST00000558455 BEGAINQ9BUH8 593 aa25.41■■□□□ 1.66
TMOD3-203ENST00000558455 RWDD1Q9H446 243 aaPredicted RBP25.41■■□□□ 1.66
TMOD3-203ENST00000558455 ATRNL1Q5VV63 1379 aa25.41■■□□□ 1.66
TMOD3-203ENST00000558455 DDTLA6NHG4 134 aaPredicted RBP25.4■■□□□ 1.66
TMOD3-203ENST00000558455 PDE6AP16499 860 aa25.4■■□□□ 1.66
TMOD3-203ENST00000558455 DYNLL1P63167 89 aaKnown RBP25.4■■□□□ 1.66
TMOD3-203ENST00000558455 MAP3K9P80192 1104 aa25.4■■□□□ 1.66
TMOD3-203ENST00000558455 VGLL4Q14135 290 aa25.4■■□□□ 1.66
TMOD3-203ENST00000558455 SLC9C2Q5TAH2 1124 aa25.4■■□□□ 1.66
TMOD3-203ENST00000558455 SPRYD7Q5W111 196 aa25.4■■□□□ 1.66
TMOD3-203ENST00000558455 WRNIP1Q96S55 665 aa25.4■■□□□ 1.66
TMOD3-203ENST00000558455 ZNF341Q9BYN7 854 aa25.4■■□□□ 1.66
TMOD3-203ENST00000558455 WNK4Q96J92 1243 aa25.39■■□□□ 1.66
TMOD3-203ENST00000558455 OSBPL5Q9H0X9 879 aaPredicted RBP25.39■■□□□ 1.66
TMOD3-203ENST00000558455 ELP3Q9H9T3 547 aa25.39■■□□□ 1.66
TMOD3-203ENST00000558455 ZBTB47Q9UFB7 747 aaPredicted RBP25.39■■□□□ 1.66
TMOD3-203ENST00000558455 IGHDP01880 384 aa25.38■■□□□ 1.65
TMOD3-203ENST00000558455 CSADQ9Y600 493 aa25.38■■□□□ 1.65
TMOD3-203ENST00000558455 COL2A1P02458 1487 aaPredicted RBP25.37■■□□□ 1.65
TMOD3-203ENST00000558455 SMC5Q8IY18 1101 aa25.37■■□□□ 1.65
TMOD3-203ENST00000558455 TGFBRAP1Q8WUH2 860 aa25.37■■□□□ 1.65
TMOD3-203ENST00000558455 AK9Q5TCS8 1911 aa25.37■■□□□ 1.65
TMOD3-203ENST00000558455 TTC41PQ6P2S7 1318 aa25.37■■□□□ 1.65
TMOD3-203ENST00000558455 ZNF532Q9HCE3 1301 aa25.37■■□□□ 1.65
TMOD3-203ENST00000558455 TCRBV5S4A2TA0A5A2 114 aa25.36■■□□□ 1.65
TMOD3-203ENST00000558455 ZBTB48P10074 688 aaPredicted RBP25.36■■□□□ 1.65
TMOD3-203ENST00000558455 GJA5P36382 358 aa25.36■■□□□ 1.65
TMOD3-203ENST00000558455 CTCFP49711 727 aaPredicted RBP25.36■■□□□ 1.65
TMOD3-203ENST00000558455 CERS3Q8IU89 383 aa25.36■■□□□ 1.65
TMOD3-203ENST00000558455 MAPKAPK5Q8IW41 473 aa25.36■■□□□ 1.65
TMOD3-203ENST00000558455 ZKSCAN4Q969J2 545 aaPredicted RBP25.36■■□□□ 1.65
TMOD3-203ENST00000558455 SNCAIPQ9Y6H5 919 aa25.36■■□□□ 1.65
TMOD3-203ENST00000558455 FLT1P17948 1338 aa25.36■■□□□ 1.65
TMOD3-203ENST00000558455 MX1P20591 662 aa25.35■■□□□ 1.65
TMOD3-203ENST00000558455 INPP5BP32019 993 aa25.35■■□□□ 1.65
TMOD3-203ENST00000558455 REM2Q8IYK8 340 aaPredicted RBP25.35■■□□□ 1.65
TMOD3-203ENST00000558455 CNKSR2Q8WXI2 1034 aa25.35■■□□□ 1.65
TMOD3-203ENST00000558455 OPTNQ96CV9 577 aa25.35■■□□□ 1.65
TMOD3-203ENST00000558455 RIOK1Q9BRS2 568 aaKnown RBP25.35■■□□□ 1.65
TMOD3-203ENST00000558455 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.35■■□□□ 1.65
TMOD3-203ENST00000558455 ZNF112Q9UJU3 913 aa25.35■■□□□ 1.65
TMOD3-203ENST00000558455 SALL3Q9BXA9 1300 aa25.35■■□□□ 1.65
TMOD3-203ENST00000558455 CA12O43570 354 aa25.34■■□□□ 1.65
TMOD3-203ENST00000558455 SLURP2P0DP57 97 aa25.34■■□□□ 1.65
TMOD3-203ENST00000558455 HSPA8P11142 646 aaKnown RBP25.34■■□□□ 1.65
TMOD3-203ENST00000558455 ADD2P35612 726 aa25.34■■□□□ 1.65
TMOD3-203ENST00000558455 PI4K2BQ8TCG2 481 aa25.34■■□□□ 1.65
TMOD3-203ENST00000558455 TSKSQ9UJT2 592 aa25.34■■□□□ 1.65
TMOD3-203ENST00000558455 MAGEB6P1A0A0J9YX57 407 aa25.33■■□□□ 1.65
TMOD3-203ENST00000558455 ERC2O15083 957 aa25.33■■□□□ 1.65
TMOD3-203ENST00000558455 MAP3K10Q02779 954 aa25.33■■□□□ 1.65
TMOD3-203ENST00000558455 SLFNL1Q499Z3 407 aa25.33■■□□□ 1.65
TMOD3-203ENST00000558455 SPDYE5A6NIY4 337 aa25.32■■□□□ 1.64
TMOD3-203ENST00000558455 CHGBP05060 677 aa25.32■■□□□ 1.64
TMOD3-203ENST00000558455 SREBF2Q12772 1141 aa25.32■■□□□ 1.64
TMOD3-203ENST00000558455 B4GALNT3Q6L9W6 998 aa25.32■■□□□ 1.64
TMOD3-203ENST00000558455 OTUD5Q96G74 571 aa25.32■■□□□ 1.64
TMOD3-203ENST00000558455 LNPKQ9C0E8 428 aa25.32■■□□□ 1.64
TMOD3-203ENST00000558455 CDK5RAP2Q96SN8 1893 aa25.32■■□□□ 1.64
TMOD3-203ENST00000558455 FOCADQ5VW36 1801 aa25.31■■□□□ 1.64
TMOD3-203ENST00000558455 MANSC4A6NHS7 340 aaPredicted RBP25.31■■□□□ 1.64
TMOD3-203ENST00000558455 PHF20L1A8MW92 1017 aa25.31■■□□□ 1.64
TMOD3-203ENST00000558455 GLRX3O76003 335 aaKnown RBP25.31■■□□□ 1.64
TMOD3-203ENST00000558455 USP5P45974 858 aa25.31■■□□□ 1.64
TMOD3-203ENST00000558455 TM4SF4P48230 202 aa25.31■■□□□ 1.64
TMOD3-203ENST00000558455 LBX1P52954 281 aa25.31■■□□□ 1.64
TMOD3-203ENST00000558455 KBTBD3Q8NAB2 608 aa25.31■■□□□ 1.64
TMOD3-203ENST00000558455 DHX36Q9H2U1 1008 aaKnown RBP25.31■■□□□ 1.64
TMOD3-203ENST00000558455 RNF186Q9NXI6 227 aa25.31■■□□□ 1.64
TMOD3-203ENST00000558455 FAM196BA6NMK8 535 aa25.3■■□□□ 1.64
TMOD3-203ENST00000558455 TBC1D12O60347 775 aa25.3■■□□□ 1.64
TMOD3-203ENST00000558455 UBE3CQ15386 1083 aa25.3■■□□□ 1.64
TMOD3-203ENST00000558455 NOL9Q5SY16 702 aaKnown RBP25.3■■□□□ 1.64
TMOD3-203ENST00000558455 ERO1BQ86YB8 467 aa25.3■■□□□ 1.64
TMOD3-203ENST00000558455 SAGE1Q9NXZ1 904 aa25.3■■□□□ 1.64
TMOD3-203ENST00000558455 SAP30BPQ9UHR5 308 aaKnown RBP25.3■■□□□ 1.64
TMOD3-203ENST00000558455 PALD1Q9ULE6 856 aa25.3■■□□□ 1.64
TMOD3-203ENST00000558455 TRPA1O75762 1119 aa25.29■■□□□ 1.64
TMOD3-203ENST00000558455 ZSCAN25Q6NSZ9 544 aa25.29■■□□□ 1.64
TMOD3-203ENST00000558455 LCORLQ8N3X6 602 aa25.29■■□□□ 1.64
TMOD3-203ENST00000558455 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.29■■□□□ 1.64
TMOD3-203ENST00000558455 NUCB1Q02818 461 aa25.28■■□□□ 1.64
TMOD3-203ENST00000558455 CRNKL1Q9BZJ0 848 aaKnown RBP25.28■■□□□ 1.64
TMOD3-203ENST00000558455 ARMT1Q9H993 441 aa25.28■■□□□ 1.64
TMOD3-203ENST00000558455 PI4KBQ9UBF8 816 aa25.28■■□□□ 1.64
TMOD3-203ENST00000558455 STAP2Q9UGK3 403 aa25.28■■□□□ 1.64
TMOD3-203ENST00000558455 MBD4O95243 580 aa25.27■■□□□ 1.64
TMOD3-203ENST00000558455 PDE1AP54750 535 aa25.27■■□□□ 1.64
TMOD3-203ENST00000558455 SLC4A8Q2Y0W8 1093 aa25.27■■□□□ 1.64
TMOD3-203ENST00000558455 CHD1LQ86WJ1 897 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms