RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 ZDHHC15Q96MV8 337 aa6.56□□□□□ -1.36
SPG11-208ENST00000558155 PARK7Q99497 189 aaKnown RBP6.56□□□□□ -1.36
SPG11-208ENST00000558155 UNC93B1Q9H1C4 597 aa6.56□□□□□ -1.36
SPG11-208ENST00000558155 KCNH4Q9UQ05 1017 aa6.56□□□□□ -1.36
SPG11-208ENST00000558155 SUGT1Q9Y2Z0 365 aa6.56□□□□□ -1.36
SPG11-208ENST00000558155 OTOFQ9HC10 1997 aa6.56□□□□□ -1.36
SPG11-208ENST00000558155 AK9Q5TCS8 1911 aa6.56□□□□□ -1.36
SPG11-208ENST00000558155 MAST3O60307 1309 aa6.55□□□□□ -1.36
SPG11-208ENST00000558155 CACNA1FO60840 1977 aa6.55□□□□□ -1.36
SPG11-208ENST00000558155 CHRM1P11229 460 aaPredicted RBP6.55□□□□□ -1.36
SPG11-208ENST00000558155 BCRP11274 1271 aa6.55□□□□□ -1.36
SPG11-208ENST00000558155 INPP5BP32019 993 aa6.55□□□□□ -1.36
SPG11-208ENST00000558155 CACNB3P54284 484 aa6.55□□□□□ -1.36
SPG11-208ENST00000558155 CHAF1AQ13111 956 aaPredicted RBP6.55□□□□□ -1.36
SPG11-208ENST00000558155 HHIPL2Q6UWX4 724 aa6.55□□□□□ -1.36
SPG11-208ENST00000558155 FBXO33Q7Z6M2 555 aa6.55□□□□□ -1.36
SPG11-208ENST00000558155 DEFB123Q8N688 67 aa6.55□□□□□ -1.36
SPG11-208ENST00000558155 FAM151AQ8WW52 585 aa6.55□□□□□ -1.36
SPG11-208ENST00000558155 PAWRQ96IZ0 340 aaKnown RBP6.55□□□□□ -1.36
SPG11-208ENST00000558155 DEFB118Q96PH6 123 aa6.55□□□□□ -1.36
SPG11-208ENST00000558155 C9orf78Q9NZ63 289 aaPredicted RBP6.55□□□□□ -1.36
SPG11-208ENST00000558155 ZNF112Q9UJU3 913 aa6.55□□□□□ -1.36
SPG11-208ENST00000558155 GABRQQ9UN88 632 aa6.55□□□□□ -1.36
SPG11-208ENST00000558155 STXBP5LQ9Y2K9 1186 aa6.55□□□□□ -1.36
SPG11-208ENST00000558155 ZSWIM8A7E2V4 1837 aa6.55□□□□□ -1.36
SPG11-208ENST00000558155 MROH5Q6ZUA9 1318 aa6.54□□□□□ -1.36
SPG11-208ENST00000558155 INHAP05111 366 aa6.54□□□□□ -1.36
SPG11-208ENST00000558155 FLT3LGP49771 235 aa6.54□□□□□ -1.36
SPG11-208ENST00000558155 BCAMP50895 628 aa6.54□□□□□ -1.36
SPG11-208ENST00000558155 DDX10Q13206 875 aaKnown RBP6.54□□□□□ -1.36
SPG11-208ENST00000558155 IRF5Q13568 498 aa6.54□□□□□ -1.36
SPG11-208ENST00000558155 LRIT3Q3SXY7 679 aa6.54□□□□□ -1.36
SPG11-208ENST00000558155 APOBEC3HQ6NTF7 200 aaKnown RBP6.54□□□□□ -1.36
SPG11-208ENST00000558155 ANKLE1Q8NAG6 615 aa6.54□□□□□ -1.36
SPG11-208ENST00000558155 TSR2Q969E8 191 aaKnown RBP6.54□□□□□ -1.36
SPG11-208ENST00000558155 COA7Q96BR5 231 aa6.54□□□□□ -1.36
SPG11-208ENST00000558155 GDF15Q99988 308 aa6.54□□□□□ -1.36
SPG11-208ENST00000558155 CRISPLD2Q9H0B8 497 aa6.54□□□□□ -1.36
SPG11-208ENST00000558155 IQSEC3Q9UPP2 1182 aaPredicted RBP6.54□□□□□ -1.36
SPG11-208ENST00000558155 MGAMO43451 1857 aa6.53□□□□□ -1.36
SPG11-208ENST00000558155 ARAP2Q8WZ64 1704 aa6.53□□□□□ -1.36
SPG11-208ENST00000558155 ADGRA2Q96PE1 1338 aa6.53□□□□□ -1.36
SPG11-208ENST00000558155 GRM8O00222 908 aa6.53□□□□□ -1.36
SPG11-208ENST00000558155 TNPO2O14787 897 aaKnown RBP6.53□□□□□ -1.36
SPG11-208ENST00000558155 CYP2C8P10632 490 aa6.53□□□□□ -1.36
SPG11-208ENST00000558155 ELNP15502 786 aa6.53□□□□□ -1.36
SPG11-208ENST00000558155 GRIK5Q16478 980 aa6.53□□□□□ -1.36
SPG11-208ENST00000558155 EPHA10Q5JZY3 1008 aa6.53□□□□□ -1.36
SPG11-208ENST00000558155 NOL9Q5SY16 702 aaKnown RBP6.53□□□□□ -1.36
SPG11-208ENST00000558155 BEND3Q5T5X7 828 aa6.53□□□□□ -1.36
SPG11-208ENST00000558155 GPAT2Q6NUI2 795 aa6.53□□□□□ -1.36
SPG11-208ENST00000558155 PUS3Q9BZE2 481 aaKnown RBP6.53□□□□□ -1.36
SPG11-208ENST00000558155 NBPF3Q9H094 633 aa6.53□□□□□ -1.36
SPG11-208ENST00000558155 PAK6Q9NQU5 681 aaPredicted RBP6.53□□□□□ -1.36
SPG11-208ENST00000558155 PICK1Q9NRD5 415 aa6.53□□□□□ -1.36
SPG11-208ENST00000558155 MTMR10Q9NXD2 777 aa6.53□□□□□ -1.36
SPG11-208ENST00000558155 TAOK2Q9UL54 1235 aa6.53□□□□□ -1.36
SPG11-208ENST00000558155 SLC45A1Q9Y2W3 748 aa6.53□□□□□ -1.36
SPG11-208ENST00000558155 ZHX2Q9Y6X8 837 aa6.53□□□□□ -1.36
SPG11-208ENST00000558155 DOCK3Q8IZD9 2030 aa6.52□□□□□ -1.37
SPG11-208ENST00000558155 F6X3S4 739 aa6.52□□□□□ -1.37
SPG11-208ENST00000558155 VAMP4O75379 141 aa6.52□□□□□ -1.37
SPG11-208ENST00000558155 ALDH1L1O75891 902 aa6.52□□□□□ -1.37
SPG11-208ENST00000558155 PDE8BO95263 885 aa6.52□□□□□ -1.37
SPG11-208ENST00000558155 ZEB1P37275 1124 aaPredicted RBP6.52□□□□□ -1.37
SPG11-208ENST00000558155 TCP10Q12799 353 aa6.52□□□□□ -1.37
SPG11-208ENST00000558155 MOGSQ13724 837 aa6.52□□□□□ -1.37
SPG11-208ENST00000558155 CCDC27Q2M243 656 aa6.52□□□□□ -1.37
SPG11-208ENST00000558155 METTL24Q5JXM2 366 aa6.52□□□□□ -1.37
SPG11-208ENST00000558155 GADL1Q6ZQY3 521 aa6.52□□□□□ -1.37
SPG11-208ENST00000558155 C7orf61Q8IZ16 206 aa6.52□□□□□ -1.37
SPG11-208ENST00000558155 TDHQ8IZJ6 230 aa6.52□□□□□ -1.37
SPG11-208ENST00000558155 WDR66Q8TBY9 1149 aa6.52□□□□□ -1.37
SPG11-208ENST00000558155 SMCR8Q8TEV9 937 aaPredicted RBP6.52□□□□□ -1.37
SPG11-208ENST00000558155 UBE2OQ9C0C9 1292 aaKnown RBP6.52□□□□□ -1.37
SPG11-208ENST00000558155 ZMYND8Q9ULU4 1186 aaPredicted RBP6.52□□□□□ -1.37
SPG11-208ENST00000558155 RPAP1Q9BWH6 1393 aaPredicted RBP6.52□□□□□ -1.37
SPG11-208ENST00000558155 IL16Q14005 1332 aa6.51□□□□□ -1.37
SPG11-208ENST00000558155 RPTORQ8N122 1335 aa6.51□□□□□ -1.37
SPG11-208ENST00000558155 A0A0G2JLL6 359 aaPredicted RBP6.51□□□□□ -1.37
SPG11-208ENST00000558155 IFIT1P09914 478 aaKnown RBP6.51□□□□□ -1.37
SPG11-208ENST00000558155 GSE1Q14687 1217 aa6.51□□□□□ -1.37
SPG11-208ENST00000558155 CDC42EP5Q6NZY7 148 aa6.51□□□□□ -1.37
SPG11-208ENST00000558155 Q7L0L9 218 aa6.51□□□□□ -1.37
SPG11-208ENST00000558155 PRRT2Q7Z6L0 340 aaPredicted RBP6.51□□□□□ -1.37
SPG11-208ENST00000558155 WWC1Q8IX03 1113 aa6.51□□□□□ -1.37
SPG11-208ENST00000558155 SCYL3Q8IZE3 742 aa6.51□□□□□ -1.37
SPG11-208ENST00000558155 COL25A1Q9BXS0 654 aaPredicted RBP6.51□□□□□ -1.37
SPG11-208ENST00000558155 SRCIN1Q9C0H9 1055 aa6.51□□□□□ -1.37
SPG11-208ENST00000558155 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.51□□□□□ -1.37
SPG11-208ENST00000558155 C11orf49Q9H6J7 331 aa6.51□□□□□ -1.37
SPG11-208ENST00000558155 HMX1Q9NP08 348 aaPredicted RBP6.51□□□□□ -1.37
SPG11-208ENST00000558155 USP40Q9NVE5 1235 aa6.51□□□□□ -1.37
SPG11-208ENST00000558155 AFG3L2Q9Y4W6 797 aa6.51□□□□□ -1.37
SPG11-208ENST00000558155 LRRFIP2Q9Y608 721 aaKnown RBP6.51□□□□□ -1.37
SPG11-208ENST00000558155 A0A1B0GUL6 1792 aa6.51□□□□□ -1.37
SPG11-208ENST00000558155 PHF20L1A8MW92 1017 aa6.5□□□□□ -1.37
SPG11-208ENST00000558155 CTNND1O60716 968 aaKnown RBP6.5□□□□□ -1.37
SPG11-208ENST00000558155 HMGCRP04035 888 aa6.5□□□□□ -1.37
SPG11-208ENST00000558155 SYN1P17600 705 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms