RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 ECE1P42892 770 aa9.51□□□□□ -0.89
SPG11-205ENST00000558080 ZNF280AP59817 542 aaPredicted RBP9.51□□□□□ -0.89
SPG11-205ENST00000558080 SCARF1Q14162 830 aa9.51□□□□□ -0.89
SPG11-205ENST00000558080 LDHAL6AQ6ZMR3 332 aa9.51□□□□□ -0.89
SPG11-205ENST00000558080 SAPCD2Q86UD0 394 aa9.51□□□□□ -0.89
SPG11-205ENST00000558080 TNS4Q8IZW8 715 aa9.51□□□□□ -0.89
SPG11-205ENST00000558080 MYOZ2Q9NPC6 264 aa9.51□□□□□ -0.89
SPG11-205ENST00000558080 CNNM1Q9NRU3 951 aa9.51□□□□□ -0.89
SPG11-205ENST00000558080 GGA3Q9NZ52 723 aa9.51□□□□□ -0.89
SPG11-205ENST00000558080 DACH1Q9UI36 760 aa9.51□□□□□ -0.89
SPG11-205ENST00000558080 ZNF609O15014 1411 aa9.5□□□□□ -0.89
SPG11-205ENST00000558080 ZBTB24O43167 697 aaPredicted RBP9.5□□□□□ -0.89
SPG11-205ENST00000558080 NBPF7P0C2Y1 421 aaPredicted RBP9.5□□□□□ -0.89
SPG11-205ENST00000558080 GTF2IP78347 998 aa9.5□□□□□ -0.89
SPG11-205ENST00000558080 DACT2Q5SW24 774 aa9.5□□□□□ -0.89
SPG11-205ENST00000558080 STRIP1Q5VSL9 837 aa9.5□□□□□ -0.89
SPG11-205ENST00000558080 ANGEL2Q5VTE6 544 aaKnown RBP9.5□□□□□ -0.89
SPG11-205ENST00000558080 TTLL5Q6EMB2 1281 aa9.5□□□□□ -0.89
SPG11-205ENST00000558080 GPIHBP1Q8IV16 184 aa9.5□□□□□ -0.89
SPG11-205ENST00000558080 KAZALD1Q96I82 304 aa9.5□□□□□ -0.89
SPG11-205ENST00000558080 PUS3Q9BZE2 481 aaKnown RBP9.5□□□□□ -0.89
SPG11-205ENST00000558080 SCAF8Q9UPN6 1271 aaKnown RBP9.5□□□□□ -0.89
SPG11-205ENST00000558080 AK9Q5TCS8 1911 aa9.5□□□□□ -0.89
SPG11-205ENST00000558080 PTPRCP08575 1304 aa9.5□□□□□ -0.89
SPG11-205ENST00000558080 WNT7AO00755 349 aa9.49□□□□□ -0.89
SPG11-205ENST00000558080 CTCFP49711 727 aaPredicted RBP9.49□□□□□ -0.89
SPG11-205ENST00000558080 MMP16P51512 607 aa9.49□□□□□ -0.89
SPG11-205ENST00000558080 LBX1P52954 281 aa9.49□□□□□ -0.89
SPG11-205ENST00000558080 HUNKP57058 714 aa9.49□□□□□ -0.89
SPG11-205ENST00000558080 PLCB2Q00722 1185 aa9.49□□□□□ -0.89
SPG11-205ENST00000558080 MAP2K1Q02750 393 aaPredicted RBP9.49□□□□□ -0.89
SPG11-205ENST00000558080 NBPF9Q3BBW0 867 aa9.49□□□□□ -0.89
SPG11-205ENST00000558080 Q3C1V9 767 aa9.49□□□□□ -0.89
SPG11-205ENST00000558080 TRMT2AQ8IZ69 625 aaKnown RBP9.49□□□□□ -0.89
SPG11-205ENST00000558080 CDCA5Q96FF9 252 aa9.49□□□□□ -0.89
SPG11-205ENST00000558080 BICC1Q9H694 974 aaKnown RBP9.49□□□□□ -0.89
SPG11-205ENST00000558080 GBA2Q9HCG7 927 aaPredicted RBP9.49□□□□□ -0.89
SPG11-205ENST00000558080 CD209Q9NNX6 404 aa9.49□□□□□ -0.89
SPG11-205ENST00000558080 SMC4Q9NTJ3 1288 aa9.49□□□□□ -0.89
SPG11-205ENST00000558080 ARAP2Q8WZ64 1704 aa9.48□□□□□ -0.89
SPG11-205ENST00000558080 ALDH1L2Q3SY69 923 aa9.48□□□□□ -0.89
SPG11-205ENST00000558080 ZNF804AQ7Z570 1209 aa9.48□□□□□ -0.89
SPG11-205ENST00000558080 KIAA0825Q8IV33 1275 aa9.48□□□□□ -0.89
SPG11-205ENST00000558080 OGFOD1Q8N543 542 aa9.48□□□□□ -0.89
SPG11-205ENST00000558080 C2orf69Q8N8R5 385 aa9.48□□□□□ -0.89
SPG11-205ENST00000558080 GMPR2Q9P2T1 348 aaKnown RBP9.48□□□□□ -0.89
SPG11-205ENST00000558080 UTYO14607 1347 aa9.48□□□□□ -0.89
SPG11-205ENST00000558080 MYO3BQ8WXR4 1341 aa9.48□□□□□ -0.89
SPG11-205ENST00000558080 IRS2Q9Y4H2 1338 aa9.48□□□□□ -0.89
SPG11-205ENST00000558080 SASH1O94885 1247 aa9.47□□□□□ -0.89
SPG11-205ENST00000558080 HSPA8P11142 646 aaKnown RBP9.47□□□□□ -0.89
SPG11-205ENST00000558080 CD46P15529 392 aa9.47□□□□□ -0.89
SPG11-205ENST00000558080 MAP2K2P36507 400 aa9.47□□□□□ -0.89
SPG11-205ENST00000558080 PRAMEF18Q5VWM3 479 aa9.47□□□□□ -0.89
SPG11-205ENST00000558080 C15orf52Q6ZUT6 534 aaKnown RBP9.47□□□□□ -0.89
SPG11-205ENST00000558080 ANKRD44Q8N8A2 993 aa9.47□□□□□ -0.89
SPG11-205ENST00000558080 HHIPL1Q96JK4 782 aa9.47□□□□□ -0.89
SPG11-205ENST00000558080 ZIC5Q96T25 663 aa9.47□□□□□ -0.89
SPG11-205ENST00000558080 BEGAINQ9BUH8 593 aa9.47□□□□□ -0.89
SPG11-205ENST00000558080 USP44Q9H0E7 712 aa9.47□□□□□ -0.89
SPG11-205ENST00000558080 HDAC9Q9UKV0 1011 aa9.47□□□□□ -0.89
SPG11-205ENST00000558080 NOB1Q9ULX3 412 aaKnown RBP9.47□□□□□ -0.89
SPG11-205ENST00000558080 JAG2Q9Y219 1238 aa9.47□□□□□ -0.89
SPG11-205ENST00000558080 PAPPA2Q9BXP8 1791 aa9.47□□□□□ -0.89
SPG11-205ENST00000558080 TTC24A2A3L6 582 aaPredicted RBP9.46□□□□□ -0.9
SPG11-205ENST00000558080 F8W031 263 aaPredicted RBP9.46□□□□□ -0.9
SPG11-205ENST00000558080 WNT10BO00744 389 aa9.46□□□□□ -0.9
SPG11-205ENST00000558080 IL1R1P14778 569 aa9.46□□□□□ -0.9
SPG11-205ENST00000558080 GYG1P46976 350 aa9.46□□□□□ -0.9
SPG11-205ENST00000558080 ZNF157P51786 506 aaPredicted RBP9.46□□□□□ -0.9
SPG11-205ENST00000558080 TRIM32Q13049 653 aa9.46□□□□□ -0.9
SPG11-205ENST00000558080 LRRC24Q50LG9 513 aa9.46□□□□□ -0.9
SPG11-205ENST00000558080 RGMBQ6NW40 437 aa9.46□□□□□ -0.9
SPG11-205ENST00000558080 CERS5Q8N5B7 392 aa9.46□□□□□ -0.9
SPG11-205ENST00000558080 KLHDC4Q8TBB5 520 aa9.46□□□□□ -0.9
SPG11-205ENST00000558080 PRDM10Q9NQV6 1147 aa9.46□□□□□ -0.9
SPG11-205ENST00000558080 RIPOR2Q9Y4F9 1068 aa9.46□□□□□ -0.9
SPG11-205ENST00000558080 PITPNM2Q9BZ72 1349 aa9.46□□□□□ -0.9
SPG11-205ENST00000558080 UBE4AQ14139 1066 aa9.45□□□□□ -0.9
SPG11-205ENST00000558080 RABL6Q3YEC7 729 aaPredicted RBP9.45□□□□□ -0.9
SPG11-205ENST00000558080 MOB2Q70IA6 237 aa9.45□□□□□ -0.9
SPG11-205ENST00000558080 SNIP1Q8TAD8 396 aaKnown RBP9.45□□□□□ -0.9
SPG11-205ENST00000558080 PCDHAC2Q9Y5I4 1007 aa9.45□□□□□ -0.9
SPG11-205ENST00000558080 MROH5Q6ZUA9 1318 aa9.45□□□□□ -0.9
SPG11-205ENST00000558080 FAM155AB1AL88 458 aaPredicted RBP9.44□□□□□ -0.9
SPG11-205ENST00000558080 UBE2Q2LH0YL09 131 aa9.44□□□□□ -0.9
SPG11-205ENST00000558080 DXOO77932 396 aaKnown RBP9.44□□□□□ -0.9
SPG11-205ENST00000558080 CT47B1P0C2W7 299 aaPredicted RBP9.44□□□□□ -0.9
SPG11-205ENST00000558080 SMPD1P17405 629 aa9.44□□□□□ -0.9
SPG11-205ENST00000558080 HIBADHP31937 336 aaKnown RBP9.44□□□□□ -0.9
SPG11-205ENST00000558080 MMP14P50281 582 aa9.44□□□□□ -0.9
SPG11-205ENST00000558080 RARSP54136 660 aaKnown RBP9.44□□□□□ -0.9
SPG11-205ENST00000558080 NOGQ13253 232 aa9.44□□□□□ -0.9
SPG11-205ENST00000558080 TTLL12Q14166 644 aaPredicted RBP9.44□□□□□ -0.9
SPG11-205ENST00000558080 DLGAP5Q15398 846 aa9.44□□□□□ -0.9
SPG11-205ENST00000558080 METTL24Q5JXM2 366 aa9.44□□□□□ -0.9
SPG11-205ENST00000558080 CCDC102AQ96A19 550 aa9.44□□□□□ -0.9
SPG11-205ENST00000558080 FAM84BQ96KN1 310 aaPredicted RBP9.44□□□□□ -0.9
SPG11-205ENST00000558080 IQSEC3Q9UPP2 1182 aaPredicted RBP9.44□□□□□ -0.9
SPG11-205ENST00000558080 MYH2Q9UKX2 1941 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms