RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 FTSJ3Q8IY81 847 aaKnown RBP16.75■□□□□ 0.27
SNRPA1-204ENST00000558020 SCYL3Q8IZE3 742 aa16.75■□□□□ 0.27
SNRPA1-204ENST00000558020 NOL10Q9BSC4 688 aaKnown RBP16.75■□□□□ 0.27
SNRPA1-204ENST00000558020 RAI14Q9P0K7 980 aa16.75■□□□□ 0.27
SNRPA1-204ENST00000558020 HMG20BQ9P0W2 317 aa16.75■□□□□ 0.27
SNRPA1-204ENST00000558020 LRP2BPQ9P2M1 347 aa16.75■□□□□ 0.27
SNRPA1-204ENST00000558020 ZHX2Q9Y6X8 837 aa16.75■□□□□ 0.27
SNRPA1-204ENST00000558020 PNMA6EA0A0J9YXQ4 647 aa16.74■□□□□ 0.27
SNRPA1-204ENST00000558020 PHF20L1A8MW92 1017 aa16.74■□□□□ 0.27
SNRPA1-204ENST00000558020 CTNND1O60716 968 aaKnown RBP16.74■□□□□ 0.27
SNRPA1-204ENST00000558020 MAP3K10Q02779 954 aa16.74■□□□□ 0.27
SNRPA1-204ENST00000558020 PICALMQ13492 652 aa16.74■□□□□ 0.27
SNRPA1-204ENST00000558020 CCDC158Q5M9N0 1113 aa16.74■□□□□ 0.27
SNRPA1-204ENST00000558020 C17orf99Q6UX52 265 aa16.74■□□□□ 0.27
SNRPA1-204ENST00000558020 TMEM57Q8N5G2 664 aa16.74■□□□□ 0.27
SNRPA1-204ENST00000558020 PARK7Q99497 189 aaKnown RBP16.74■□□□□ 0.27
SNRPA1-204ENST00000558020 SLC34A2O95436 690 aa16.73■□□□□ 0.27
SNRPA1-204ENST00000558020 ARID4AP29374 1257 aaPredicted RBP16.73■□□□□ 0.27
SNRPA1-204ENST00000558020 ATP8B2P98198 1209 aa16.73■□□□□ 0.27
SNRPA1-204ENST00000558020 GPR108Q9NPR9 543 aa16.73■□□□□ 0.27
SNRPA1-204ENST00000558020 PTCH2Q9Y6C5 1203 aa16.73■□□□□ 0.27
SNRPA1-204ENST00000558020 POTEFA5A3E0 1075 aa16.72■□□□□ 0.27
SNRPA1-204ENST00000558020 TBC1D12O60347 775 aa16.72■□□□□ 0.27
SNRPA1-204ENST00000558020 SURF6O75683 361 aaKnown RBP16.72■□□□□ 0.27
SNRPA1-204ENST00000558020 FMNL1O95466 1100 aaPredicted RBP16.72■□□□□ 0.27
SNRPA1-204ENST00000558020 BAG3O95817 575 aa16.72■□□□□ 0.27
SNRPA1-204ENST00000558020 PTPRAP18433 802 aa16.72■□□□□ 0.27
SNRPA1-204ENST00000558020 SLC4A8Q2Y0W8 1093 aa16.72■□□□□ 0.27
SNRPA1-204ENST00000558020 TBC1D9Q6ZT07 1266 aa16.72■□□□□ 0.27
SNRPA1-204ENST00000558020 NSUN4Q96CB9 384 aaKnown RBP16.72■□□□□ 0.27
SNRPA1-204ENST00000558020 ZNF333Q96JL9 665 aa16.72■□□□□ 0.27
SNRPA1-204ENST00000558020 CPA4Q9UI42 421 aa16.72■□□□□ 0.27
SNRPA1-204ENST00000558020 HTTP42858 3142 aa16.72■□□□□ 0.27
SNRPA1-204ENST00000558020 DDTLA6NHG4 134 aaPredicted RBP16.71■□□□□ 0.27
SNRPA1-204ENST00000558020 IGSF3O75054 1194 aa16.71■□□□□ 0.27
SNRPA1-204ENST00000558020 PLCG2P16885 1265 aa16.71■□□□□ 0.27
SNRPA1-204ENST00000558020 PSMC4P43686 418 aa16.71■□□□□ 0.27
SNRPA1-204ENST00000558020 TTC39AQ5SRH9 613 aa16.71■□□□□ 0.27
SNRPA1-204ENST00000558020 SH3BP5LQ7L8J4 393 aa16.71■□□□□ 0.27
SNRPA1-204ENST00000558020 SSH3Q8TE77 659 aa16.71■□□□□ 0.27
SNRPA1-204ENST00000558020 TNNQ9UQP3 1299 aa16.71■□□□□ 0.27
SNRPA1-204ENST00000558020 AFG3L2Q9Y4W6 797 aa16.71■□□□□ 0.27
SNRPA1-204ENST00000558020 CENPFP49454 3210 aa16.71■□□□□ 0.27
SNRPA1-204ENST00000558020 ATRNL1Q5VV63 1379 aa16.7■□□□□ 0.26
SNRPA1-204ENST00000558020 A0A0G2JLL6 359 aaPredicted RBP16.7■□□□□ 0.26
SNRPA1-204ENST00000558020 RHBDL3P58872 404 aa16.7■□□□□ 0.26
SNRPA1-204ENST00000558020 CAP1Q01518 475 aa16.7■□□□□ 0.26
SNRPA1-204ENST00000558020 POLA2Q14181 598 aa16.7■□□□□ 0.26
SNRPA1-204ENST00000558020 DIEXFQ68CQ4 756 aaKnown RBP16.7■□□□□ 0.26
SNRPA1-204ENST00000558020 PRRT2Q7Z6L0 340 aaPredicted RBP16.7■□□□□ 0.26
SNRPA1-204ENST00000558020 ITPRIPQ8IWB1 547 aa16.7■□□□□ 0.26
SNRPA1-204ENST00000558020 MIER1Q8N108 512 aa16.7■□□□□ 0.26
SNRPA1-204ENST00000558020 ARHGAP39Q9C0H5 1083 aa16.7■□□□□ 0.26
SNRPA1-204ENST00000558020 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.7■□□□□ 0.26
SNRPA1-204ENST00000558020 DDX4Q9NQI0 724 aaKnown RBP16.7■□□□□ 0.26
SNRPA1-204ENST00000558020 SLC45A1Q9Y2W3 748 aa16.7■□□□□ 0.26
SNRPA1-204ENST00000558020 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.7■□□□□ 0.26
SNRPA1-204ENST00000558020 EN2P19622 333 aaPredicted RBP16.69■□□□□ 0.26
SNRPA1-204ENST00000558020 MCAMP43121 646 aa16.69■□□□□ 0.26
SNRPA1-204ENST00000558020 MOGSQ13724 837 aa16.69■□□□□ 0.26
SNRPA1-204ENST00000558020 TNNI3KQ59H18 835 aa16.69■□□□□ 0.26
SNRPA1-204ENST00000558020 NAA16Q6N069 864 aaPredicted RBP16.69■□□□□ 0.26
SNRPA1-204ENST00000558020 PI16Q6UXB8 463 aa16.69■□□□□ 0.26
SNRPA1-204ENST00000558020 GADL1Q6ZQY3 521 aa16.69■□□□□ 0.26
SNRPA1-204ENST00000558020 TEX11Q8IYF3 940 aa16.69■□□□□ 0.26
SNRPA1-204ENST00000558020 RAET1EQ8TD07 263 aa16.69■□□□□ 0.26
SNRPA1-204ENST00000558020 GCC1Q96CN9 775 aa16.69■□□□□ 0.26
SNRPA1-204ENST00000558020 TBC1D2Q9BYX2 928 aa16.69■□□□□ 0.26
SNRPA1-204ENST00000558020 SRRDQ9UH36 339 aa16.69■□□□□ 0.26
SNRPA1-204ENST00000558020 FPGT-TNNI3KV9GXZ4 949 aa16.69■□□□□ 0.26
SNRPA1-204ENST00000558020 RFX7Q2KHR2 1363 aa16.68■□□□□ 0.26
SNRPA1-204ENST00000558020 FCGRTP55899 365 aa16.68■□□□□ 0.26
SNRPA1-204ENST00000558020 GPAT2Q6NUI2 795 aa16.68■□□□□ 0.26
SNRPA1-204ENST00000558020 ZNF384Q8TF68 577 aa16.68■□□□□ 0.26
SNRPA1-204ENST00000558020 ZNF512BQ96KM6 892 aaPredicted RBP16.68■□□□□ 0.26
SNRPA1-204ENST00000558020 TRIM47Q96LD4 638 aa16.68■□□□□ 0.26
SNRPA1-204ENST00000558020 OSBPL5Q9H0X9 879 aaPredicted RBP16.68■□□□□ 0.26
SNRPA1-204ENST00000558020 DHX36Q9H2U1 1008 aaKnown RBP16.68■□□□□ 0.26
SNRPA1-204ENST00000558020 HERC5Q9UII4 1024 aaKnown RBP16.68■□□□□ 0.26
SNRPA1-204ENST00000558020 DOCK2Q92608 1830 aa16.68■□□□□ 0.26
SNRPA1-204ENST00000558020 KIAA0100Q14667 2235 aaKnown RBP16.68■□□□□ 0.26
SNRPA1-204ENST00000558020 TRIM75PA6NK02 468 aa16.67■□□□□ 0.26
SNRPA1-204ENST00000558020 ZBTB7BO15156 539 aaPredicted RBP16.67■□□□□ 0.26
SNRPA1-204ENST00000558020 MS4A1P11836 297 aa16.67■□□□□ 0.26
SNRPA1-204ENST00000558020 SMCR8Q8TEV9 937 aaPredicted RBP16.67■□□□□ 0.26
SNRPA1-204ENST00000558020 SH3TC2Q8TF17 1288 aa16.67■□□□□ 0.26
SNRPA1-204ENST00000558020 SNRKQ9NRH2 765 aa16.67■□□□□ 0.26
SNRPA1-204ENST00000558020 PI4KBQ9UBF8 816 aa16.67■□□□□ 0.26
SNRPA1-204ENST00000558020 NOP58Q9Y2X3 529 aaKnown RBP16.67■□□□□ 0.26
SNRPA1-204ENST00000558020 ECM2O94769 699 aaPredicted RBP16.66■□□□□ 0.26
SNRPA1-204ENST00000558020 CYP2C8P10632 490 aa16.66■□□□□ 0.26
SNRPA1-204ENST00000558020 OSBPP22059 807 aa16.66■□□□□ 0.26
SNRPA1-204ENST00000558020 PABPC4Q13310 644 aaKnown RBP eCLIP16.66■□□□□ 0.26
SNRPA1-204ENST00000558020 DBNDD2Q9BQY9 259 aa16.66■□□□□ 0.26
SNRPA1-204ENST00000558020 BIN2Q9UBW5 565 aaPredicted RBP16.66■□□□□ 0.26
SNRPA1-204ENST00000558020 PNMA3Q9UL41 463 aa16.66■□□□□ 0.26
SNRPA1-204ENST00000558020 ADGRA2Q96PE1 1338 aa16.66■□□□□ 0.26
SNRPA1-204ENST00000558020 RBBP6Q7Z6E9 1792 aaKnown RBP16.65■□□□□ 0.26
SNRPA1-204ENST00000558020 MYCP01106 439 aaPredicted RBP16.65■□□□□ 0.26
SNRPA1-204ENST00000558020 BCRP11274 1271 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms