RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 TSHZ2Q9NRE2 1034 aa12.64□□□□□ -0.39
PRKCH-227ENST00000557599 HELLSQ9NRZ9 838 aa12.64□□□□□ -0.39
PRKCH-227ENST00000557599 RAI14Q9P0K7 980 aa12.64□□□□□ -0.39
PRKCH-227ENST00000557599 SERPINA10Q9UK55 444 aa12.64□□□□□ -0.39
PRKCH-227ENST00000557599 NDUFB9Q9Y6M9 179 aa12.64□□□□□ -0.39
PRKCH-227ENST00000557599 MYH7P12883 1935 aa12.64□□□□□ -0.39
PRKCH-227ENST00000557599 SGSM2O43147 1006 aa12.63□□□□□ -0.39
PRKCH-227ENST00000557599 CYP2E1P05181 493 aaPredicted RBP12.63□□□□□ -0.39
PRKCH-227ENST00000557599 SREBF2Q12772 1141 aa12.63□□□□□ -0.39
PRKCH-227ENST00000557599 CFAP100Q494V2 611 aa12.63□□□□□ -0.39
PRKCH-227ENST00000557599 SPDYE2Q495Y8 402 aa12.63□□□□□ -0.39
PRKCH-227ENST00000557599 MCMDC2Q4G0Z9 681 aa12.63□□□□□ -0.39
PRKCH-227ENST00000557599 SLC9C2Q5TAH2 1124 aa12.63□□□□□ -0.39
PRKCH-227ENST00000557599 PI16Q6UXB8 463 aa12.63□□□□□ -0.39
PRKCH-227ENST00000557599 SLF2Q8IX21 1173 aa12.63□□□□□ -0.39
PRKCH-227ENST00000557599 APPBP2Q92624 585 aa12.63□□□□□ -0.39
PRKCH-227ENST00000557599 TEPSINQ96N21 525 aa12.63□□□□□ -0.39
PRKCH-227ENST00000557599 FZD1Q9UP38 647 aa12.63□□□□□ -0.39
PRKCH-227ENST00000557599 TESPA1A2RU30 521 aaPredicted RBP12.62□□□□□ -0.39
PRKCH-227ENST00000557599 GPR25O00155 361 aa12.62□□□□□ -0.39
PRKCH-227ENST00000557599 GSTO1P78417 241 aa12.62□□□□□ -0.39
PRKCH-227ENST00000557599 UBE3CQ15386 1083 aa12.62□□□□□ -0.39
PRKCH-227ENST00000557599 ARMC9Q7Z3E5 817 aa12.62□□□□□ -0.39
PRKCH-227ENST00000557599 DZIP1Q86YF9 867 aaKnown RBP12.62□□□□□ -0.39
PRKCH-227ENST00000557599 NOL10Q9BSC4 688 aaKnown RBP12.62□□□□□ -0.39
PRKCH-227ENST00000557599 C22orf23Q9BZE7 217 aa12.62□□□□□ -0.39
PRKCH-227ENST00000557599 R3HDMLQ9H3Y0 253 aa12.62□□□□□ -0.39
PRKCH-227ENST00000557599 ANTXR1Q9H6X2 564 aa12.62□□□□□ -0.39
PRKCH-227ENST00000557599 PIH1D3Q9NQM4 214 aaKnown RBP12.62□□□□□ -0.39
PRKCH-227ENST00000557599 SLC34A2O95436 690 aa12.61□□□□□ -0.39
PRKCH-227ENST00000557599 TBC1D8O95759 1140 aa12.61□□□□□ -0.39
PRKCH-227ENST00000557599 LDHBP07195 334 aaKnown RBP12.61□□□□□ -0.39
PRKCH-227ENST00000557599 LDHCP07864 332 aa12.61□□□□□ -0.39
PRKCH-227ENST00000557599 PDE6AP16499 860 aa12.61□□□□□ -0.39
PRKCH-227ENST00000557599 ADD2P35612 726 aa12.61□□□□□ -0.39
PRKCH-227ENST00000557599 GJA5P36382 358 aa12.61□□□□□ -0.39
PRKCH-227ENST00000557599 PKN2Q16513 984 aaKnown RBP12.61□□□□□ -0.39
PRKCH-227ENST00000557599 ZMYM1Q5SVZ6 1142 aa12.61□□□□□ -0.39
PRKCH-227ENST00000557599 NBPF12Q5TAG4 269 aaPredicted RBP12.61□□□□□ -0.39
PRKCH-227ENST00000557599 WNK4Q96J92 1243 aa12.61□□□□□ -0.39
PRKCH-227ENST00000557599 CLMNQ96JQ2 1002 aa12.61□□□□□ -0.39
PRKCH-227ENST00000557599 ANGEL1Q9UNK9 670 aaKnown RBP12.61□□□□□ -0.39
PRKCH-227ENST00000557599 HPS5Q9UPZ3 1129 aa12.61□□□□□ -0.39
PRKCH-227ENST00000557599 MAST3O60307 1309 aa12.61□□□□□ -0.39
PRKCH-227ENST00000557599 CCDC171Q6TFL3 1326 aa12.61□□□□□ -0.39
PRKCH-227ENST00000557599 SALL1Q9NSC2 1324 aa12.61□□□□□ -0.39
PRKCH-227ENST00000557599 A0A0D9SFI3 127 aa12.6□□□□□ -0.39
PRKCH-227ENST00000557599 CLRN2A0PK11 232 aa12.6□□□□□ -0.39
PRKCH-227ENST00000557599 IGF2BP3O00425 579 aaKnown RBP eCLIP12.6□□□□□ -0.39
PRKCH-227ENST00000557599 USP2O75604 605 aaPredicted RBP12.6□□□□□ -0.39
PRKCH-227ENST00000557599 INHBEP58166 350 aa12.6□□□□□ -0.39
PRKCH-227ENST00000557599 HDLBPQ00341 1268 aaKnown RBP12.6□□□□□ -0.39
PRKCH-227ENST00000557599 RASA3Q14644 834 aa12.6□□□□□ -0.39
PRKCH-227ENST00000557599 GRIK5Q16478 980 aa12.6□□□□□ -0.39
PRKCH-227ENST00000557599 MFSD14BQ5SR56 506 aa12.6□□□□□ -0.39
PRKCH-227ENST00000557599 RNF20Q5VTR2 975 aa12.6□□□□□ -0.39
PRKCH-227ENST00000557599 NAA16Q6N069 864 aaPredicted RBP12.6□□□□□ -0.39
PRKCH-227ENST00000557599 CDAN1Q8IWY9 1227 aa12.6□□□□□ -0.39
PRKCH-227ENST00000557599 MAGEB6Q8N7X4 407 aa12.6□□□□□ -0.39
PRKCH-227ENST00000557599 FAM227BQ96M60 508 aa12.6□□□□□ -0.39
PRKCH-227ENST00000557599 SUGT1Q9Y2Z0 365 aa12.6□□□□□ -0.39
PRKCH-227ENST00000557599 ZNF532Q9HCE3 1301 aa12.6□□□□□ -0.39
PRKCH-227ENST00000557599 RPAP1Q9BWH6 1393 aaPredicted RBP12.59□□□□□ -0.39
PRKCH-227ENST00000557599 MANSC4A6NHS7 340 aaPredicted RBP12.59□□□□□ -0.39
PRKCH-227ENST00000557599 MYO1BO43795 1136 aa12.59□□□□□ -0.39
PRKCH-227ENST00000557599 PPP1R12BO60237 982 aaPredicted RBP12.59□□□□□ -0.39
PRKCH-227ENST00000557599 SEC24BO95487 1268 aa12.59□□□□□ -0.39
PRKCH-227ENST00000557599 ALDH1A1P00352 501 aa12.59□□□□□ -0.39
PRKCH-227ENST00000557599 CYP7A1P22680 504 aa12.59□□□□□ -0.39
PRKCH-227ENST00000557599 TTLL12Q14166 644 aaPredicted RBP12.59□□□□□ -0.39
PRKCH-227ENST00000557599 IFNL1Q8IU54 200 aa12.59□□□□□ -0.39
PRKCH-227ENST00000557599 CERS3Q8IU89 383 aa12.59□□□□□ -0.39
PRKCH-227ENST00000557599 DDRGK1Q96HY6 314 aa12.59□□□□□ -0.39
PRKCH-227ENST00000557599 TBC1D32Q96NH3 1257 aa12.59□□□□□ -0.39
PRKCH-227ENST00000557599 MRIQ9BWK5 157 aa12.59□□□□□ -0.39
PRKCH-227ENST00000557599 ZNF70Q9UC06 446 aaPredicted RBP12.59□□□□□ -0.39
PRKCH-227ENST00000557599 JAG2Q9Y219 1238 aa12.59□□□□□ -0.39
PRKCH-227ENST00000557599 RBM19Q9Y4C8 960 aaKnown RBP12.59□□□□□ -0.39
PRKCH-227ENST00000557599 DOCK2Q92608 1830 aa12.59□□□□□ -0.39
PRKCH-227ENST00000557599 F8W031 263 aaPredicted RBP12.58□□□□□ -0.4
PRKCH-227ENST00000557599 ZKSCAN1P17029 563 aaPredicted RBP12.58□□□□□ -0.4
PRKCH-227ENST00000557599 GNAT2P19087 354 aa12.58□□□□□ -0.4
PRKCH-227ENST00000557599 CRKP46108 304 aa12.58□□□□□ -0.4
PRKCH-227ENST00000557599 TNFAIP1Q13829 316 aa12.58□□□□□ -0.4
PRKCH-227ENST00000557599 PRKG1Q13976 671 aa12.58□□□□□ -0.4
PRKCH-227ENST00000557599 SUPT20HL1Q3ZLR7 823 aa12.58□□□□□ -0.4
PRKCH-227ENST00000557599 USP26Q9BXU7 913 aa12.58□□□□□ -0.4
PRKCH-227ENST00000557599 CTNNA3Q9UI47 895 aa12.58□□□□□ -0.4
PRKCH-227ENST00000557599 TTF2Q9UNY4 1162 aaKnown RBP12.58□□□□□ -0.4
PRKCH-227ENST00000557599 U3KPZ7 1027 aaPredicted RBP12.58□□□□□ -0.4
PRKCH-227ENST00000557599 MAST2Q6P0Q8 1798 aa12.57□□□□□ -0.4
PRKCH-227ENST00000557599 BAG3O95817 575 aa12.57□□□□□ -0.4
PRKCH-227ENST00000557599 MKRN3Q13064 507 aaKnown RBP12.57□□□□□ -0.4
PRKCH-227ENST00000557599 FBXO46Q6PJ61 603 aaPredicted RBP12.57□□□□□ -0.4
PRKCH-227ENST00000557599 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.57□□□□□ -0.4
PRKCH-227ENST00000557599 ANKRD13AQ8IZ07 590 aa12.57□□□□□ -0.4
PRKCH-227ENST00000557599 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.57□□□□□ -0.4
PRKCH-227ENST00000557599 MS4A4AQ96JQ5 239 aa12.57□□□□□ -0.4
PRKCH-227ENST00000557599 PTPN18Q99952 460 aa12.57□□□□□ -0.4
PRKCH-227ENST00000557599 NACAP1Q9BZK3 213 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms