RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 PTPROQ16827 1216 aa6.91□□□□□ -1.3
MTHFD1-216ENST00000557539 PLA2G4EQ3MJ16 856 aa6.91□□□□□ -1.3
MTHFD1-216ENST00000557539 DTHD1Q6ZMT9 781 aa6.91□□□□□ -1.3
MTHFD1-216ENST00000557539 EDARADDQ8WWZ3 215 aa6.91□□□□□ -1.3
MTHFD1-216ENST00000557539 MKL1Q969V6 931 aa6.91□□□□□ -1.3
MTHFD1-216ENST00000557539 CWC22Q9HCG8 908 aaKnown RBP6.91□□□□□ -1.3
MTHFD1-216ENST00000557539 BRD7Q9NPI1 651 aa6.91□□□□□ -1.3
MTHFD1-216ENST00000557539 SIRPGQ9P1W8 387 aa6.91□□□□□ -1.3
MTHFD1-216ENST00000557539 GDF2Q9UK05 429 aaPredicted RBP6.91□□□□□ -1.3
MTHFD1-216ENST00000557539 ARHGAP23Q9P227 1491 aa6.91□□□□□ -1.3
MTHFD1-216ENST00000557539 TMEM238LA0A1B0GVL6 79 aa6.9□□□□□ -1.3
MTHFD1-216ENST00000557539 CCDC85CA6NKD9 419 aa6.9□□□□□ -1.3
MTHFD1-216ENST00000557539 SASH3O75995 380 aa6.9□□□□□ -1.3
MTHFD1-216ENST00000557539 RLBP1P12271 317 aa6.9□□□□□ -1.3
MTHFD1-216ENST00000557539 TNP2Q05952 138 aa6.9□□□□□ -1.3
MTHFD1-216ENST00000557539 PEAR1Q5VY43 1037 aaPredicted RBP6.9□□□□□ -1.3
MTHFD1-216ENST00000557539 FBXL19Q6PCT2 694 aa6.9□□□□□ -1.3
MTHFD1-216ENST00000557539 TPTE2Q6XPS3 522 aa6.9□□□□□ -1.3
MTHFD1-216ENST00000557539 KRT25Q7Z3Z0 450 aa6.9□□□□□ -1.3
MTHFD1-216ENST00000557539 HNRNPLLQ8WVV9 542 aaKnown RBP6.9□□□□□ -1.3
MTHFD1-216ENST00000557539 ANAPC16Q96DE5 110 aa6.9□□□□□ -1.3
MTHFD1-216ENST00000557539 LIN7BQ9HAP6 207 aa6.9□□□□□ -1.3
MTHFD1-216ENST00000557539 KLF15Q9UIH9 416 aa6.9□□□□□ -1.3
MTHFD1-216ENST00000557539 GGA1Q9UJY5 639 aa6.9□□□□□ -1.3
MTHFD1-216ENST00000557539 STRIP2Q9ULQ0 834 aa6.9□□□□□ -1.3
MTHFD1-216ENST00000557539 PPM1HQ9ULR3 514 aa6.9□□□□□ -1.3
MTHFD1-216ENST00000557539 TLR6Q9Y2C9 796 aa6.9□□□□□ -1.3
MTHFD1-216ENST00000557539 MSH6P52701 1360 aa6.9□□□□□ -1.31
MTHFD1-216ENST00000557539 hCG_2014768A0A024R1R8 64 aa6.89□□□□□ -1.31
MTHFD1-216ENST00000557539 DCDC2BA2VCK2 349 aa6.89□□□□□ -1.31
MTHFD1-216ENST00000557539 ATXN7O15265 892 aaPredicted RBP6.89□□□□□ -1.31
MTHFD1-216ENST00000557539 IGHA1P01876 353 aa6.89□□□□□ -1.31
MTHFD1-216ENST00000557539 MAPTP10636 758 aaKnown RBP6.89□□□□□ -1.31
MTHFD1-216ENST00000557539 SOX9P48436 509 aa6.89□□□□□ -1.31
MTHFD1-216ENST00000557539 IGBP1P78318 339 aa6.89□□□□□ -1.31
MTHFD1-216ENST00000557539 PRPF40BQ6NWY9 871 aaKnown RBP6.89□□□□□ -1.31
MTHFD1-216ENST00000557539 FIGNL1Q6PIW4 674 aa6.89□□□□□ -1.31
MTHFD1-216ENST00000557539 SV2BQ7L1I2 683 aa6.89□□□□□ -1.31
MTHFD1-216ENST00000557539 PODNQ7Z5L7 613 aa6.89□□□□□ -1.31
MTHFD1-216ENST00000557539 GOLGA6L1Q8N7Z2 621 aa6.89□□□□□ -1.31
MTHFD1-216ENST00000557539 NT5C1AQ9BXI3 368 aa6.89□□□□□ -1.31
MTHFD1-216ENST00000557539 ABCB6Q9NP58 842 aa6.89□□□□□ -1.31
MTHFD1-216ENST00000557539 UBP1Q9NZI7 540 aa6.89□□□□□ -1.31
MTHFD1-216ENST00000557539 R3HCC1Q9Y3T6 440 aaKnown RBP6.89□□□□□ -1.31
MTHFD1-216ENST00000557539 SUPT16HQ9Y5B9 1047 aaKnown RBP6.89□□□□□ -1.31
MTHFD1-216ENST00000557539 IQGAP2Q13576 1575 aa6.88□□□□□ -1.31
MTHFD1-216ENST00000557539 DIP2AQ14689 1571 aa6.88□□□□□ -1.31
MTHFD1-216ENST00000557539 KLF4O43474 513 aa6.88□□□□□ -1.31
MTHFD1-216ENST00000557539 PF4P02776 101 aa6.88□□□□□ -1.31
MTHFD1-216ENST00000557539 IBSPP21815 317 aaPredicted RBP6.88□□□□□ -1.31
MTHFD1-216ENST00000557539 LIG3P49916 1009 aa6.88□□□□□ -1.31
MTHFD1-216ENST00000557539 RAB33AQ14088 237 aa6.88□□□□□ -1.31
MTHFD1-216ENST00000557539 NBPF8Q3BBV2 869 aa6.88□□□□□ -1.31
MTHFD1-216ENST00000557539 SNAP47Q5SQN1 464 aa6.88□□□□□ -1.31
MTHFD1-216ENST00000557539 RNF187Q5TA31 235 aaPredicted RBP6.88□□□□□ -1.31
MTHFD1-216ENST00000557539 SLCO4C1Q6ZQN7 724 aa6.88□□□□□ -1.31
MTHFD1-216ENST00000557539 PHC3Q8NDX5 983 aa6.88□□□□□ -1.31
MTHFD1-216ENST00000557539 RHOVQ96L33 236 aa6.88□□□□□ -1.31
MTHFD1-216ENST00000557539 SALL4Q9UJQ4 1053 aa6.88□□□□□ -1.31
MTHFD1-216ENST00000557539 WDR90Q96KV7 1748 aa6.87□□□□□ -1.31
MTHFD1-216ENST00000557539 AHDC1Q5TGY3 1603 aaPredicted RBP6.87□□□□□ -1.31
MTHFD1-216ENST00000557539 NRKQ7Z2Y5 1582 aa6.87□□□□□ -1.31
MTHFD1-216ENST00000557539 MAP3K1Q13233 1512 aa6.87□□□□□ -1.31
MTHFD1-216ENST00000557539 RAB11FIP3O75154 756 aa6.87□□□□□ -1.31
MTHFD1-216ENST00000557539 CELA3AP09093 270 aa6.87□□□□□ -1.31
MTHFD1-216ENST00000557539 ARAFP10398 606 aa6.87□□□□□ -1.31
MTHFD1-216ENST00000557539 EPXP11678 715 aa6.87□□□□□ -1.31
MTHFD1-216ENST00000557539 CD33P20138 364 aa6.87□□□□□ -1.31
MTHFD1-216ENST00000557539 TARSP26639 723 aaKnown RBP6.87□□□□□ -1.31
MTHFD1-216ENST00000557539 COL8A1P27658 744 aa6.87□□□□□ -1.31
MTHFD1-216ENST00000557539 APOBRQ0VD83 1088 aa6.87□□□□□ -1.31
MTHFD1-216ENST00000557539 COL9A2Q14055 689 aaPredicted RBP6.87□□□□□ -1.31
MTHFD1-216ENST00000557539 LINC00114Q6XXX2 140 aa6.87□□□□□ -1.31
MTHFD1-216ENST00000557539 GOLM1Q8NBJ4 401 aa6.87□□□□□ -1.31
MTHFD1-216ENST00000557539 OR13H1Q8NG92 308 aa6.87□□□□□ -1.31
MTHFD1-216ENST00000557539 KCNB2Q92953 911 aa6.87□□□□□ -1.31
MTHFD1-216ENST00000557539 RNPC3Q96LT9 517 aaKnown RBP6.87□□□□□ -1.31
MTHFD1-216ENST00000557539 DEPDC7Q96QD5 511 aa6.87□□□□□ -1.31
MTHFD1-216ENST00000557539 C11orf16Q9NQ32 467 aa6.87□□□□□ -1.31
MTHFD1-216ENST00000557539 STRN4Q9NRL3 753 aa6.87□□□□□ -1.31
MTHFD1-216ENST00000557539 SNTG2Q9NY99 539 aa6.87□□□□□ -1.31
MTHFD1-216ENST00000557539 PLCH2O75038 1416 aa6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 KRBA1A5PL33 1030 aa6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 NEURL1BA8MQ27 555 aa6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 ENPP3O14638 875 aa6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 KHNYNO15037 678 aaKnown RBP6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 GREM1O60565 184 aa6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 MMP20O60882 483 aa6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 GARTP22102 1010 aa6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 CAMK2GQ13555 558 aaPredicted RBP6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 FAM182BQ5T319 152 aa6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 PCNX4Q63HM2 1172 aa6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 CCDC81Q6ZN84 652 aa6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 KRT27Q7Z3Y8 459 aa6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 NCAPG2Q86XI2 1143 aa6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 SLC17A8Q8NDX2 589 aa6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 ANKRD24Q8TF21 1146 aa6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 NKD1Q969G9 470 aa6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 BTBD6Q96KE9 485 aa6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 TCF12Q99081 682 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms