RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 DDTLA6NHG4 134 aaPredicted RBP17.53■□□□□ 0.4
SLIRP-210ENST00000557431 FAM196BA6NMK8 535 aa17.53■□□□□ 0.4
SLIRP-210ENST00000557431 CIAO1O76071 339 aa17.53■□□□□ 0.4
SLIRP-210ENST00000557431 TIMM10P62072 90 aa17.53■□□□□ 0.4
SLIRP-210ENST00000557431 PRKCZQ05513 592 aa17.53■□□□□ 0.4
SLIRP-210ENST00000557431 RASGRF1Q13972 1273 aa17.53■□□□□ 0.4
SLIRP-210ENST00000557431 ZSCAN29Q8IWY8 852 aaPredicted RBP17.53■□□□□ 0.4
SLIRP-210ENST00000557431 GNL3LQ9NVN8 582 aaKnown RBP17.53■□□□□ 0.4
SLIRP-210ENST00000557431 FOCADQ5VW36 1801 aa17.53■□□□□ 0.4
SLIRP-210ENST00000557431 SALL1Q9NSC2 1324 aa17.52■□□□□ 0.4
SLIRP-210ENST00000557431 PLXNB2O15031 1838 aa17.52■□□□□ 0.4
SLIRP-210ENST00000557431 PHF20L1A8MW92 1017 aa17.52■□□□□ 0.4
SLIRP-210ENST00000557431 BCRP11274 1271 aa17.52■□□□□ 0.4
SLIRP-210ENST00000557431 GRK4P32298 578 aa17.52■□□□□ 0.4
SLIRP-210ENST00000557431 TNNQ9UQP3 1299 aa17.52■□□□□ 0.4
SLIRP-210ENST00000557431 ZHX2Q9Y6X8 837 aa17.52■□□□□ 0.4
SLIRP-210ENST00000557431 GAKO14976 1311 aa17.51■□□□□ 0.39
SLIRP-210ENST00000557431 CCL5P13501 91 aa17.51■□□□□ 0.39
SLIRP-210ENST00000557431 IL15P40933 162 aaPredicted RBP17.51■□□□□ 0.39
SLIRP-210ENST00000557431 BTDP43251 543 aa17.51■□□□□ 0.39
SLIRP-210ENST00000557431 PI16Q6UXB8 463 aa17.51■□□□□ 0.39
SLIRP-210ENST00000557431 DZIP1Q86YF9 867 aaKnown RBP17.51■□□□□ 0.39
SLIRP-210ENST00000557431 SCYL3Q8IZE3 742 aa17.51■□□□□ 0.39
SLIRP-210ENST00000557431 PARK7Q99497 189 aaKnown RBP17.51■□□□□ 0.39
SLIRP-210ENST00000557431 BIN2Q9UBW5 565 aaPredicted RBP17.51■□□□□ 0.39
SLIRP-210ENST00000557431 MAST2Q6P0Q8 1798 aa17.51■□□□□ 0.39
SLIRP-210ENST00000557431 GNRH1P01148 92 aa17.5■□□□□ 0.39
SLIRP-210ENST00000557431 PTPRAP18433 802 aa17.5■□□□□ 0.39
SLIRP-210ENST00000557431 PRMT2P55345 433 aa17.5■□□□□ 0.39
SLIRP-210ENST00000557431 TFCP2Q12800 502 aa17.5■□□□□ 0.39
SLIRP-210ENST00000557431 CHRDL2Q6WN34 429 aa17.5■□□□□ 0.39
SLIRP-210ENST00000557431 ZNF384Q8TF68 577 aa17.5■□□□□ 0.39
SLIRP-210ENST00000557431 MYH1P12882 1939 aa17.49■□□□□ 0.39
SLIRP-210ENST00000557431 A0A0G2JLL6 359 aaPredicted RBP17.49■□□□□ 0.39
SLIRP-210ENST00000557431 A0A1B0GUL7 405 aa17.49■□□□□ 0.39
SLIRP-210ENST00000557431 CXCL11O14625 94 aa17.49■□□□□ 0.39
SLIRP-210ENST00000557431 ELNP15502 786 aa17.49■□□□□ 0.39
SLIRP-210ENST00000557431 PRRT2Q7Z6L0 340 aaPredicted RBP17.49■□□□□ 0.39
SLIRP-210ENST00000557431 TRMT2AQ8IZ69 625 aaKnown RBP17.49■□□□□ 0.39
SLIRP-210ENST00000557431 DPF3Q92784 378 aa17.49■□□□□ 0.39
SLIRP-210ENST00000557431 XAGE2Q96GT9 111 aa17.49■□□□□ 0.39
SLIRP-210ENST00000557431 IDI2Q9BXS1 227 aa17.49■□□□□ 0.39
SLIRP-210ENST00000557431 RNF208Q9H0X6 261 aa17.49■□□□□ 0.39
SLIRP-210ENST00000557431 UNC93B1Q9H1C4 597 aa17.49■□□□□ 0.39
SLIRP-210ENST00000557431 COPRSQ9NQ92 184 aa17.49■□□□□ 0.39
SLIRP-210ENST00000557431 PICK1Q9NRD5 415 aa17.49■□□□□ 0.39
SLIRP-210ENST00000557431 FBXO3Q9UK99 471 aa17.49■□□□□ 0.39
SLIRP-210ENST00000557431 AFG3L2Q9Y4W6 797 aa17.49■□□□□ 0.39
SLIRP-210ENST00000557431 MROH7-TTC4A0A0A0MT08 1334 aa17.48■□□□□ 0.39
SLIRP-210ENST00000557431 TRIM75PA6NK02 468 aa17.48■□□□□ 0.39
SLIRP-210ENST00000557431 SEMA3EO15041 775 aa17.48■□□□□ 0.39
SLIRP-210ENST00000557431 ENTPD3O75355 529 aa17.48■□□□□ 0.39
SLIRP-210ENST00000557431 HOXD10P28358 340 aa17.48■□□□□ 0.39
SLIRP-210ENST00000557431 FCGRTP55899 365 aa17.48■□□□□ 0.39
SLIRP-210ENST00000557431 TAOK2Q9UL54 1235 aa17.48■□□□□ 0.39
SLIRP-210ENST00000557431 MECOMQ03112 1051 aa17.47■□□□□ 0.39
SLIRP-210ENST00000557431 TREML2Q5T2D2 321 aa17.47■□□□□ 0.39
SLIRP-210ENST00000557431 TBC1D9Q6ZT07 1266 aa17.47■□□□□ 0.39
SLIRP-210ENST00000557431 API5Q9BZZ5 524 aaKnown RBP17.47■□□□□ 0.39
SLIRP-210ENST00000557431 SRGAP3O43295 1099 aa17.46■□□□□ 0.39
SLIRP-210ENST00000557431 FLT3LGP49771 235 aa17.46■□□□□ 0.39
SLIRP-210ENST00000557431 RHBDL3P58872 404 aa17.46■□□□□ 0.39
SLIRP-210ENST00000557431 ZGPATQ8N5A5 531 aaKnown RBP17.46■□□□□ 0.39
SLIRP-210ENST00000557431 NEUROD6Q96NK8 337 aa17.46■□□□□ 0.39
SLIRP-210ENST00000557431 DDX60LQ5H9U9 1706 aaKnown RBP17.45■□□□□ 0.38
SLIRP-210ENST00000557431 ADCY3O60266 1144 aa17.45■□□□□ 0.38
SLIRP-210ENST00000557431 GJB1P08034 283 aa17.45■□□□□ 0.38
SLIRP-210ENST00000557431 GJA8P48165 433 aa17.45■□□□□ 0.38
SLIRP-210ENST00000557431 UBXN2AP68543 259 aa17.45■□□□□ 0.38
SLIRP-210ENST00000557431 RRP1BQ14684 758 aaKnown RBP17.45■□□□□ 0.38
SLIRP-210ENST00000557431 ERICH6Q7L0X2 663 aa17.45■□□□□ 0.38
SLIRP-210ENST00000557431 FASTKD5Q7L8L6 764 aaKnown RBP17.45■□□□□ 0.38
SLIRP-210ENST00000557431 U2AF1L4Q8WU68 220 aaKnown RBP17.45■□□□□ 0.38
SLIRP-210ENST00000557431 HMG20BQ9P0W2 317 aa17.45■□□□□ 0.38
SLIRP-210ENST00000557431 RBM27Q9P2N5 1060 aaKnown RBP17.45■□□□□ 0.38
SLIRP-210ENST00000557431 RARSP54136 660 aaKnown RBP17.44■□□□□ 0.38
SLIRP-210ENST00000557431 UBE2Q1Q7Z7E8 422 aa17.44■□□□□ 0.38
SLIRP-210ENST00000557431 ANKRD13CQ8N6S4 541 aa17.44■□□□□ 0.38
SLIRP-210ENST00000557431 SMCR8Q8TEV9 937 aaPredicted RBP17.44■□□□□ 0.38
SLIRP-210ENST00000557431 FRMPD3Q5JV73 1810 aa17.43■□□□□ 0.38
SLIRP-210ENST00000557431 TNPO2O14787 897 aaKnown RBP17.43■□□□□ 0.38
SLIRP-210ENST00000557431 CTNND1O60716 968 aaKnown RBP17.43■□□□□ 0.38
SLIRP-210ENST00000557431 FARP2O94887 1054 aaPredicted RBP17.43■□□□□ 0.38
SLIRP-210ENST00000557431 INHAP05111 366 aa17.43■□□□□ 0.38
SLIRP-210ENST00000557431 MAP3K10Q02779 954 aa17.43■□□□□ 0.38
SLIRP-210ENST00000557431 SLAIN1Q8ND83 568 aa17.43■□□□□ 0.38
SLIRP-210ENST00000557431 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.43■□□□□ 0.38
SLIRP-210ENST00000557431 SZT2Q5T011 3432 aa17.43■□□□□ 0.38
SLIRP-210ENST00000557431 GPR75-ASB3A0A0A6YYF3 556 aa17.42■□□□□ 0.38
SLIRP-210ENST00000557431 PNMA6EA0A0J9YXQ4 647 aa17.42■□□□□ 0.38
SLIRP-210ENST00000557431 PEX10O60683 326 aa17.42■□□□□ 0.38
SLIRP-210ENST00000557431 MVPQ14764 893 aaKnown RBP17.42■□□□□ 0.38
SLIRP-210ENST00000557431 SPTY2D1Q68D10 685 aaPredicted RBP17.42■□□□□ 0.38
SLIRP-210ENST00000557431 NSUN4Q96CB9 384 aaKnown RBP17.42■□□□□ 0.38
SLIRP-210ENST00000557431 FAM163AQ96GL9 167 aaPredicted RBP17.42■□□□□ 0.38
SLIRP-210ENST00000557431 RAI14Q9P0K7 980 aa17.42■□□□□ 0.38
SLIRP-210ENST00000557431 PDS5AQ29RF7 1337 aaKnown RBP17.42■□□□□ 0.38
SLIRP-210ENST00000557431 MCAMP43121 646 aa17.41■□□□□ 0.38
SLIRP-210ENST00000557431 SPP2Q13103 211 aa17.41■□□□□ 0.38
SLIRP-210ENST00000557431 SHROOM1Q2M3G4 852 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms