RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 ZNF710Q8N1W2 664 aa26.18■■□□□ 1.78
RCCD1-208ENST00000557266 TAOK2Q9UL54 1235 aa26.18■■□□□ 1.78
RCCD1-208ENST00000557266 ECM29Q5VYK3 1845 aa26.18■■□□□ 1.78
RCCD1-208ENST00000557266 A0A0G2JS52 829 aa26.17■■□□□ 1.78
RCCD1-208ENST00000557266 NTSR2O95665 410 aa26.17■■□□□ 1.78
RCCD1-208ENST00000557266 U2AF2P26368 475 aaKnown RBP eCLIP26.17■■□□□ 1.783e-10■■■□□ 17.3
RCCD1-208ENST00000557266 ACSBG1Q96GR2 724 aa26.17■■□□□ 1.78
RCCD1-208ENST00000557266 MAP3K14Q99558 947 aa26.17■■□□□ 1.78
RCCD1-208ENST00000557266 CNNM2Q9H8M5 875 aa26.17■■□□□ 1.78
RCCD1-208ENST00000557266 SLC12A7Q9Y666 1083 aa26.17■■□□□ 1.78
RCCD1-208ENST00000557266 RTL9Q8NET4 1388 aa26.17■■□□□ 1.78
RCCD1-208ENST00000557266 ITPK1Q13572 414 aa26.17■■□□□ 1.78
RCCD1-208ENST00000557266 PNPLA7Q6ZV29 1317 aa26.17■■□□□ 1.78
RCCD1-208ENST00000557266 STK36Q9NRP7 1315 aa26.16■■□□□ 1.78
RCCD1-208ENST00000557266 LOC102724428A0A0B4J2F2 783 aa26.16■■□□□ 1.78
RCCD1-208ENST00000557266 IGHMBP2P38935 993 aaKnown RBP26.16■■□□□ 1.78
RCCD1-208ENST00000557266 SIK1P57059 783 aa26.16■■□□□ 1.78
RCCD1-208ENST00000557266 ZRSR1Q15695 479 aaKnown RBP26.16■■□□□ 1.78
RCCD1-208ENST00000557266 C16orf45Q96MC5 204 aaPredicted RBP26.16■■□□□ 1.78
RCCD1-208ENST00000557266 NID2Q14112 1375 aa26.15■■□□□ 1.78
RCCD1-208ENST00000557266 BIN1O00499 593 aa26.15■■□□□ 1.78
RCCD1-208ENST00000557266 PPP6R2O75170 966 aa26.15■■□□□ 1.78
RCCD1-208ENST00000557266 GNL2Q13823 731 aaKnown RBP26.15■■□□□ 1.78
RCCD1-208ENST00000557266 FAM98CQ17RN3 349 aaKnown RBP26.15■■□□□ 1.78
RCCD1-208ENST00000557266 STAG1Q8WVM7 1258 aa26.15■■□□□ 1.78
RCCD1-208ENST00000557266 KRT23Q9C075 422 aa26.15■■□□□ 1.78
RCCD1-208ENST00000557266 HPSEQ9Y251 543 aa26.15■■□□□ 1.78
RCCD1-208ENST00000557266 CCDC69A6NI79 296 aa26.15■■□□□ 1.78
RCCD1-208ENST00000557266 NEMFO60524 1076 aa26.15■■□□□ 1.78
RCCD1-208ENST00000557266 NLRP12P59046 1061 aa26.15■■□□□ 1.78
RCCD1-208ENST00000557266 RBM6P78332 1123 aaKnown RBP26.15■■□□□ 1.78
RCCD1-208ENST00000557266 SHC4Q6S5L8 630 aa26.15■■□□□ 1.78
RCCD1-208ENST00000557266 MFSD6Q6ZSS7 791 aa26.15■■□□□ 1.78
RCCD1-208ENST00000557266 SLC26A6Q9BXS9 759 aa26.15■■□□□ 1.78
RCCD1-208ENST00000557266 NIP7Q9Y221 180 aaKnown RBP eCLIP26.15■■□□□ 1.78
RCCD1-208ENST00000557266 SLC4A4Q9Y6R1 1079 aa26.15■■□□□ 1.78
RCCD1-208ENST00000557266 RREB1Q92766 1687 aa26.15■■□□□ 1.78
RCCD1-208ENST00000557266 GNAT2P19087 354 aa26.14■■□□□ 1.78
RCCD1-208ENST00000557266 TDO2P48775 406 aa26.14■■□□□ 1.78
RCCD1-208ENST00000557266 TRIM29Q14134 588 aa26.14■■□□□ 1.78
RCCD1-208ENST00000557266 FILIP1Q7Z7B0 1213 aa26.14■■□□□ 1.78
RCCD1-208ENST00000557266 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.14■■□□□ 1.78
RCCD1-208ENST00000557266 FMNL1O95466 1100 aaPredicted RBP26.14■■□□□ 1.77
RCCD1-208ENST00000557266 CHRNDQ07001 517 aa26.14■■□□□ 1.77
RCCD1-208ENST00000557266 SSRP1Q08945 709 aaKnown RBP26.14■■□□□ 1.77
RCCD1-208ENST00000557266 GLIPR1L2Q4G1C9 344 aa26.14■■□□□ 1.77
RCCD1-208ENST00000557266 NBPF11Q86T75 865 aa26.14■■□□□ 1.77
RCCD1-208ENST00000557266 TIGD1Q96MW7 591 aa26.14■■□□□ 1.77
RCCD1-208ENST00000557266 NACAP1Q9BZK3 213 aa26.14■■□□□ 1.77
RCCD1-208ENST00000557266 THSD7AQ9UPZ6 1657 aa26.13■■□□□ 1.77
RCCD1-208ENST00000557266 SYKP43405 635 aa26.13■■□□□ 1.77
RCCD1-208ENST00000557266 JMYQ8N9B5 988 aa26.13■■□□□ 1.77
RCCD1-208ENST00000557266 MARCH10Q8NA82 808 aaPredicted RBP26.13■■□□□ 1.77
RCCD1-208ENST00000557266 CHD4Q14839 1912 aa26.13■■□□□ 1.77
RCCD1-208ENST00000557266 AFF2P51816 1311 aa26.13■■□□□ 1.77
RCCD1-208ENST00000557266 COL4A1P02462 1669 aa26.12■■□□□ 1.77
RCCD1-208ENST00000557266 IFNAR1P17181 557 aa26.12■■□□□ 1.77
RCCD1-208ENST00000557266 MIGA1Q8NAN2 632 aa26.12■■□□□ 1.77
RCCD1-208ENST00000557266 BCL2L12Q9HB09 334 aa26.12■■□□□ 1.77
RCCD1-208ENST00000557266 FAM237AA0A1B0GTK4 181 aa26.12■■□□□ 1.77
RCCD1-208ENST00000557266 RRP12Q5JTH9 1297 aaKnown RBP26.12■■□□□ 1.77
RCCD1-208ENST00000557266 BCORQ6W2J9 1755 aa26.11■■□□□ 1.77
RCCD1-208ENST00000557266 GUCY1A2P33402 732 aa26.11■■□□□ 1.77
RCCD1-208ENST00000557266 CCZ1BP86790 482 aa26.11■■□□□ 1.77
RCCD1-208ENST00000557266 CCZ1P86791 482 aaPredicted RBP26.11■■□□□ 1.77
RCCD1-208ENST00000557266 NCAPHQ15003 741 aa26.11■■□□□ 1.77
RCCD1-208ENST00000557266 ZKSCAN3Q9BRR0 538 aa26.11■■□□□ 1.77
RCCD1-208ENST00000557266 LRP2BPQ9P2M1 347 aa26.11■■□□□ 1.77
RCCD1-208ENST00000557266 SKILP12757 684 aa26.11■■□□□ 1.77
RCCD1-208ENST00000557266 TNNT1P13805 278 aa26.11■■□□□ 1.77
RCCD1-208ENST00000557266 RESP18Q5W5W9 173 aa26.11■■□□□ 1.77
RCCD1-208ENST00000557266 CLIC6Q96NY7 704 aa26.11■■□□□ 1.77
RCCD1-208ENST00000557266 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.11■■□□□ 1.77
RCCD1-208ENST00000557266 MYH14Q7Z406 1995 aaKnown RBP26.1■■□□□ 1.77
RCCD1-208ENST00000557266 LAMB2P55268 1798 aa26.1■■□□□ 1.77
RCCD1-208ENST00000557266 TPD52L1Q16890 204 aaPredicted RBP26.1■■□□□ 1.77
RCCD1-208ENST00000557266 TOMM22Q9NS69 142 aa26.1■■□□□ 1.77
RCCD1-208ENST00000557266 TUBE1Q9UJT0 475 aa26.1■■□□□ 1.77
RCCD1-208ENST00000557266 ADGRA1Q86SQ6 560 aa26.09■■□□□ 1.77
RCCD1-208ENST00000557266 CTIFO43310 598 aaKnown RBP26.09■■□□□ 1.77
RCCD1-208ENST00000557266 WTAPQ15007 396 aa26.09■■□□□ 1.77
RCCD1-208ENST00000557266 RTN1Q16799 776 aa26.09■■□□□ 1.77
RCCD1-208ENST00000557266 NOSTRINQ8IVI9 506 aa26.09■■□□□ 1.77
RCCD1-208ENST00000557266 OSBPL5Q9H0X9 879 aaPredicted RBP26.09■■□□□ 1.77
RCCD1-208ENST00000557266 IQSEC3Q9UPP2 1182 aaPredicted RBP26.09■■□□□ 1.77
RCCD1-208ENST00000557266 SART3Q15020 963 aaKnown RBP26.08■■□□□ 1.77
RCCD1-208ENST00000557266 STK11IPQ8N1F8 1099 aa26.08■■□□□ 1.77
RCCD1-208ENST00000557266 WASF1Q92558 559 aa26.08■■□□□ 1.77
RCCD1-208ENST00000557266 XPO4Q9C0E2 1151 aaKnown RBP26.08■■□□□ 1.77
RCCD1-208ENST00000557266 USP27XA6NNY8 438 aa26.08■■□□□ 1.76
RCCD1-208ENST00000557266 CUTAO60888 179 aa26.08■■□□□ 1.76
RCCD1-208ENST00000557266 MMP1P03956 469 aa26.08■■□□□ 1.76
RCCD1-208ENST00000557266 IFNKQ9P0W0 207 aa26.08■■□□□ 1.76
RCCD1-208ENST00000557266 ZNF804BA4D1E1 1349 aa26.07■■□□□ 1.76
RCCD1-208ENST00000557266 CICQ96RK0 1608 aaPredicted RBP26.07■■□□□ 1.76
RCCD1-208ENST00000557266 PRKCSHP14314 528 aaPredicted RBP26.07■■□□□ 1.76
RCCD1-208ENST00000557266 CYP7A1P22680 504 aa26.07■■□□□ 1.76
RCCD1-208ENST00000557266 ISM2Q6H9L7 571 aa26.07■■□□□ 1.76
RCCD1-208ENST00000557266 SMTNL1A8MU46 457 aa26.06■■□□□ 1.76
RCCD1-208ENST00000557266 BTBD18B2RXH4 712 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms