RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 DDTLA6NHG4 134 aaPredicted RBP19.59■□□□□ 0.73
TUBB3-213ENST00000557262 GNRH1P01148 92 aa19.59■□□□□ 0.73
TUBB3-213ENST00000557262 GSTO1P78417 241 aa19.59■□□□□ 0.73
TUBB3-213ENST00000557262 C17orf99Q6UX52 265 aa19.59■□□□□ 0.73
TUBB3-213ENST00000557262 TMEM106CQ9BVX2 250 aa19.59■□□□□ 0.73
TUBB3-213ENST00000557262 PTCH2Q9Y6C5 1203 aa19.59■□□□□ 0.73
TUBB3-213ENST00000557262 ATRNL1Q5VV63 1379 aa19.58■□□□□ 0.73
TUBB3-213ENST00000557262 MKI67P46013 3256 aaKnown RBP19.58■□□□□ 0.73
TUBB3-213ENST00000557262 MAP4K4O95819 1239 aaPredicted RBP19.58■□□□□ 0.72
TUBB3-213ENST00000557262 UQCRFS1P1P0C7P4 283 aa19.58■□□□□ 0.72
TUBB3-213ENST00000557262 ARID4AP29374 1257 aaPredicted RBP19.58■□□□□ 0.72
TUBB3-213ENST00000557262 ATP8B2P98198 1209 aa19.58■□□□□ 0.72
TUBB3-213ENST00000557262 HNRNPUQ00839 825 aaKnown RBP eCLIP19.58■□□□□ 0.72
TUBB3-213ENST00000557262 PICALMQ13492 652 aa19.58■□□□□ 0.72
TUBB3-213ENST00000557262 MOGSQ13724 837 aa19.58■□□□□ 0.72
TUBB3-213ENST00000557262 TBC1D9Q6ZT07 1266 aa19.58■□□□□ 0.72
TUBB3-213ENST00000557262 SCYL3Q8IZE3 742 aa19.58■□□□□ 0.72
TUBB3-213ENST00000557262 ZNF384Q8TF68 577 aa19.58■□□□□ 0.72
TUBB3-213ENST00000557262 ARHGAP39Q9C0H5 1083 aa19.58■□□□□ 0.72
TUBB3-213ENST00000557262 DDX4Q9NQI0 724 aaKnown RBP19.58■□□□□ 0.72
TUBB3-213ENST00000557262 PICK1Q9NRD5 415 aa19.58■□□□□ 0.72
TUBB3-213ENST00000557262 ZHX2Q9Y6X8 837 aa19.58■□□□□ 0.72
TUBB3-213ENST00000557262 NPM3O75607 178 aaKnown RBP19.57■□□□□ 0.72
TUBB3-213ENST00000557262 RHBDL3P58872 404 aa19.57■□□□□ 0.72
TUBB3-213ENST00000557262 POLA2Q14181 598 aa19.57■□□□□ 0.72
TUBB3-213ENST00000557262 SLC9C1Q4G0N8 1177 aa19.57■□□□□ 0.72
TUBB3-213ENST00000557262 PI16Q6UXB8 463 aa19.57■□□□□ 0.72
TUBB3-213ENST00000557262 MIER1Q8N108 512 aa19.57■□□□□ 0.72
TUBB3-213ENST00000557262 NSUN4Q96CB9 384 aaKnown RBP19.57■□□□□ 0.72
TUBB3-213ENST00000557262 ZNF333Q96JL9 665 aa19.57■□□□□ 0.72
TUBB3-213ENST00000557262 CPA4Q9UI42 421 aa19.57■□□□□ 0.72
TUBB3-213ENST00000557262 RFX7Q2KHR2 1363 aa19.57■□□□□ 0.72
TUBB3-213ENST00000557262 CTNND1O60716 968 aaKnown RBP19.56■□□□□ 0.72
TUBB3-213ENST00000557262 PTPRAP18433 802 aa19.56■□□□□ 0.72
TUBB3-213ENST00000557262 PRMT2P55345 433 aa19.56■□□□□ 0.72
TUBB3-213ENST00000557262 FASTKD5Q7L8L6 764 aaKnown RBP19.56■□□□□ 0.72
TUBB3-213ENST00000557262 SSH3Q8TE77 659 aa19.56■□□□□ 0.72
TUBB3-213ENST00000557262 GPR108Q9NPR9 543 aa19.56■□□□□ 0.72
TUBB3-213ENST00000557262 RAI14Q9P0K7 980 aa19.56■□□□□ 0.72
TUBB3-213ENST00000557262 KIAA0100Q14667 2235 aaKnown RBP19.55■□□□□ 0.72
TUBB3-213ENST00000557262 TBC1D12O60347 775 aa19.55■□□□□ 0.72
TUBB3-213ENST00000557262 EN2P19622 333 aaPredicted RBP19.55■□□□□ 0.72
TUBB3-213ENST00000557262 MCAMP43121 646 aa19.55■□□□□ 0.72
TUBB3-213ENST00000557262 GPAT2Q6NUI2 795 aa19.55■□□□□ 0.72
TUBB3-213ENST00000557262 LRP2BPQ9P2M1 347 aa19.55■□□□□ 0.72
TUBB3-213ENST00000557262 AFG3L2Q9Y4W6 797 aa19.55■□□□□ 0.72
TUBB3-213ENST00000557262 BRCA2P51587 3418 aa19.54■□□□□ 0.72
TUBB3-213ENST00000557262 SLURP2P0DP57 97 aa19.54■□□□□ 0.72
TUBB3-213ENST00000557262 HOXD10P28358 340 aa19.54■□□□□ 0.72
TUBB3-213ENST00000557262 PSMC4P43686 418 aa19.54■□□□□ 0.72
TUBB3-213ENST00000557262 OS9Q13438 667 aaPredicted RBP19.54■□□□□ 0.72
TUBB3-213ENST00000557262 CCDC158Q5M9N0 1113 aa19.54■□□□□ 0.72
TUBB3-213ENST00000557262 ADGRA2Q96PE1 1338 aa19.53■□□□□ 0.72
TUBB3-213ENST00000557262 A0A0G2JLL6 359 aaPredicted RBP19.53■□□□□ 0.72
TUBB3-213ENST00000557262 ZBTB7BO15156 539 aaPredicted RBP19.53■□□□□ 0.72
TUBB3-213ENST00000557262 SURF6O75683 361 aaKnown RBP19.53■□□□□ 0.72
TUBB3-213ENST00000557262 TNNI3KQ59H18 835 aa19.53■□□□□ 0.72
TUBB3-213ENST00000557262 PRRT2Q7Z6L0 340 aaPredicted RBP19.53■□□□□ 0.72
TUBB3-213ENST00000557262 FTSJ3Q8IY81 847 aaKnown RBP19.53■□□□□ 0.72
TUBB3-213ENST00000557262 PARK7Q99497 189 aaKnown RBP19.53■□□□□ 0.72
TUBB3-213ENST00000557262 FPGT-TNNI3KV9GXZ4 949 aa19.53■□□□□ 0.72
TUBB3-213ENST00000557262 ECM2O94769 699 aaPredicted RBP19.52■□□□□ 0.72
TUBB3-213ENST00000557262 FMNL1O95466 1100 aaPredicted RBP19.52■□□□□ 0.72
TUBB3-213ENST00000557262 CTGFP29279 349 aa19.52■□□□□ 0.72
TUBB3-213ENST00000557262 SLC4A8Q2Y0W8 1093 aa19.52■□□□□ 0.72
TUBB3-213ENST00000557262 TTC39AQ5SRH9 613 aa19.52■□□□□ 0.72
TUBB3-213ENST00000557262 TRIM47Q96LD4 638 aa19.52■□□□□ 0.72
TUBB3-213ENST00000557262 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.52■□□□□ 0.72
TUBB3-213ENST00000557262 SRRDQ9UH36 339 aa19.52■□□□□ 0.72
TUBB3-213ENST00000557262 CYP2C8P10632 490 aa19.51■□□□□ 0.71
TUBB3-213ENST00000557262 DIEXFQ68CQ4 756 aaKnown RBP19.51■□□□□ 0.71
TUBB3-213ENST00000557262 GADL1Q6ZQY3 521 aa19.51■□□□□ 0.71
TUBB3-213ENST00000557262 ITPRIPQ8IWB1 547 aa19.51■□□□□ 0.71
TUBB3-213ENST00000557262 SH3TC2Q8TF17 1288 aa19.51■□□□□ 0.71
TUBB3-213ENST00000557262 DBNDD2Q9BQY9 259 aa19.51■□□□□ 0.71
TUBB3-213ENST00000557262 NOL10Q9BSC4 688 aaKnown RBP19.51■□□□□ 0.71
TUBB3-213ENST00000557262 C1orf115Q9H7X2 142 aa19.51■□□□□ 0.71
TUBB3-213ENST00000557262 SNRKQ9NRH2 765 aa19.51■□□□□ 0.71
TUBB3-213ENST00000557262 SLC45A1Q9Y2W3 748 aa19.51■□□□□ 0.71
TUBB3-213ENST00000557262 NOP58Q9Y2X3 529 aaKnown RBP19.51■□□□□ 0.71
TUBB3-213ENST00000557262 RBBP6Q7Z6E9 1792 aaKnown RBP19.51■□□□□ 0.71
TUBB3-213ENST00000557262 BAG3O95817 575 aa19.5■□□□□ 0.71
TUBB3-213ENST00000557262 BCRP11274 1271 aa19.5■□□□□ 0.71
TUBB3-213ENST00000557262 OSBPP22059 807 aa19.5■□□□□ 0.71
TUBB3-213ENST00000557262 TEX11Q8IYF3 940 aa19.5■□□□□ 0.71
TUBB3-213ENST00000557262 ZNF512BQ96KM6 892 aaPredicted RBP19.5■□□□□ 0.71
TUBB3-213ENST00000557262 OSBPL5Q9H0X9 879 aaPredicted RBP19.5■□□□□ 0.71
TUBB3-213ENST00000557262 DOCK2Q92608 1830 aa19.5■□□□□ 0.71
TUBB3-213ENST00000557262 ZSWIM8A7E2V4 1837 aa19.49■□□□□ 0.71
TUBB3-213ENST00000557262 MYCP01106 439 aaPredicted RBP19.49■□□□□ 0.71
TUBB3-213ENST00000557262 RLBP1P12271 317 aa19.49■□□□□ 0.71
TUBB3-213ENST00000557262 NAA16Q6N069 864 aaPredicted RBP19.49■□□□□ 0.71
TUBB3-213ENST00000557262 TRIM75PA6NK02 468 aa19.48■□□□□ 0.71
TUBB3-213ENST00000557262 FAM196BA6NMK8 535 aa19.48■□□□□ 0.71
TUBB3-213ENST00000557262 IGSF3O75054 1194 aa19.48■□□□□ 0.71
TUBB3-213ENST00000557262 CYP2E1P05181 493 aaPredicted RBP19.48■□□□□ 0.71
TUBB3-213ENST00000557262 PLCG2P16885 1265 aa19.48■□□□□ 0.71
TUBB3-213ENST00000557262 PPP4CP60510 307 aa19.48■□□□□ 0.71
TUBB3-213ENST00000557262 RAET1EQ8TD07 263 aa19.48■□□□□ 0.71
TUBB3-213ENST00000557262 SH3RF3Q8TEJ3 882 aaPredicted RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms