RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 INHBEP58166 350 aa13.07□□□□□ -0.32
IFT43-212ENST00000556742 MAP3K9P80192 1104 aa13.07□□□□□ -0.32
IFT43-212ENST00000556742 SREBF2Q12772 1141 aa13.07□□□□□ -0.32
IFT43-212ENST00000556742 MAP3K12Q12852 859 aa13.07□□□□□ -0.32
IFT43-212ENST00000556742 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.07□□□□□ -0.32
IFT43-212ENST00000556742 CLMNQ96JQ2 1002 aa13.07□□□□□ -0.32
IFT43-212ENST00000556742 ZNF341Q9BYN7 854 aa13.07□□□□□ -0.32
IFT43-212ENST00000556742 MYH8P13535 1937 aa13.07□□□□□ -0.32
IFT43-212ENST00000556742 DDX60LQ5H9U9 1706 aaKnown RBP13.07□□□□□ -0.32
IFT43-212ENST00000556742 IDH1O75874 414 aaKnown RBP13.06□□□□□ -0.32
IFT43-212ENST00000556742 MAP3K10Q02779 954 aa13.06□□□□□ -0.32
IFT43-212ENST00000556742 HDAC1Q13547 482 aaPredicted RBP13.06□□□□□ -0.32
IFT43-212ENST00000556742 WNK4Q96J92 1243 aa13.06□□□□□ -0.32
IFT43-212ENST00000556742 ANTXR1Q9H6X2 564 aa13.06□□□□□ -0.32
IFT43-212ENST00000556742 DDX4Q9NQI0 724 aaKnown RBP13.06□□□□□ -0.32
IFT43-212ENST00000556742 ZNF112Q9UJU3 913 aa13.06□□□□□ -0.32
IFT43-212ENST00000556742 CSADQ9Y600 493 aa13.06□□□□□ -0.32
IFT43-212ENST00000556742 MANSC4A6NHS7 340 aaPredicted RBP13.05□□□□□ -0.32
IFT43-212ENST00000556742 LBX1P52954 281 aa13.05□□□□□ -0.32
IFT43-212ENST00000556742 VGLL4Q14135 290 aa13.05□□□□□ -0.32
IFT43-212ENST00000556742 ADGRA1Q86SQ6 560 aa13.05□□□□□ -0.32
IFT43-212ENST00000556742 ZFPM1Q8IX07 1006 aa13.05□□□□□ -0.32
IFT43-212ENST00000556742 TEX11Q8IYF3 940 aa13.05□□□□□ -0.32
IFT43-212ENST00000556742 WRNIP1Q96S55 665 aa13.05□□□□□ -0.32
IFT43-212ENST00000556742 HAUS7Q99871 368 aa13.05□□□□□ -0.32
IFT43-212ENST00000556742 OSBPL5Q9H0X9 879 aaPredicted RBP13.05□□□□□ -0.32
IFT43-212ENST00000556742 AATFQ9NY61 560 aaKnown RBP eCLIP13.05□□□□□ -0.32
IFT43-212ENST00000556742 NDUFB9Q9Y6M9 179 aa13.05□□□□□ -0.32
IFT43-212ENST00000556742 BAZ2AQ9UIF9 1905 aaKnown RBP13.04□□□□□ -0.32
IFT43-212ENST00000556742 SPDYE5A6NIY4 337 aa13.04□□□□□ -0.32
IFT43-212ENST00000556742 SMARCA5O60264 1052 aaPredicted RBP13.04□□□□□ -0.32
IFT43-212ENST00000556742 CYP7A1P22680 504 aa13.04□□□□□ -0.32
IFT43-212ENST00000556742 PICALMQ13492 652 aa13.04□□□□□ -0.32
IFT43-212ENST00000556742 COL13A1Q5TAT6 717 aaPredicted RBP13.04□□□□□ -0.32
IFT43-212ENST00000556742 SH3BP5LQ7L8J4 393 aa13.04□□□□□ -0.32
IFT43-212ENST00000556742 MAGEB6Q8N7X4 407 aa13.04□□□□□ -0.32
IFT43-212ENST00000556742 SH3RF3Q8TEJ3 882 aaPredicted RBP13.04□□□□□ -0.32
IFT43-212ENST00000556742 GCC1Q96CN9 775 aa13.04□□□□□ -0.32
IFT43-212ENST00000556742 OPTNQ96CV9 577 aa13.04□□□□□ -0.32
IFT43-212ENST00000556742 GPATCH3Q96I76 525 aa13.04□□□□□ -0.32
IFT43-212ENST00000556742 ELP3Q9H9T3 547 aa13.04□□□□□ -0.32
IFT43-212ENST00000556742 ECHDC1Q9NTX5 307 aa13.04□□□□□ -0.32
IFT43-212ENST00000556742 PAG1Q9NWQ8 432 aa13.04□□□□□ -0.32
IFT43-212ENST00000556742 RNF186Q9NXI6 227 aa13.04□□□□□ -0.32
IFT43-212ENST00000556742 SNCAIPQ9Y6H5 919 aa13.04□□□□□ -0.32
IFT43-212ENST00000556742 TESPA1A2RU30 521 aaPredicted RBP13.03□□□□□ -0.32
IFT43-212ENST00000556742 DDTLA6NHG4 134 aaPredicted RBP13.03□□□□□ -0.32
IFT43-212ENST00000556742 GOLIM4O00461 696 aa13.03□□□□□ -0.32
IFT43-212ENST00000556742 TBC1D12O60347 775 aa13.03□□□□□ -0.32
IFT43-212ENST00000556742 ALDH1A1P00352 501 aa13.03□□□□□ -0.32
IFT43-212ENST00000556742 NOL9Q5SY16 702 aaKnown RBP13.03□□□□□ -0.32
IFT43-212ENST00000556742 MIGA2Q7L4E1 593 aa13.03□□□□□ -0.32
IFT43-212ENST00000556742 ERO1BQ86YB8 467 aa13.03□□□□□ -0.32
IFT43-212ENST00000556742 ZSCAN29Q8IWY8 852 aaPredicted RBP13.03□□□□□ -0.32
IFT43-212ENST00000556742 ZKSCAN4Q969J2 545 aaPredicted RBP13.03□□□□□ -0.32
IFT43-212ENST00000556742 DNAJC2Q99543 621 aaKnown RBP13.03□□□□□ -0.32
IFT43-212ENST00000556742 CFHR5Q9BXR6 569 aa13.03□□□□□ -0.32
IFT43-212ENST00000556742 DHX36Q9H2U1 1008 aaKnown RBP13.03□□□□□ -0.32
IFT43-212ENST00000556742 BOLA2Q9H3K6 86 aa13.03□□□□□ -0.32
IFT43-212ENST00000556742 SUPT16HQ9Y5B9 1047 aaKnown RBP13.03□□□□□ -0.32
IFT43-212ENST00000556742 TRPA1O75762 1119 aa13.02□□□□□ -0.33
IFT43-212ENST00000556742 PDE6AP16499 860 aa13.02□□□□□ -0.33
IFT43-212ENST00000556742 GJA5P36382 358 aa13.02□□□□□ -0.33
IFT43-212ENST00000556742 PPATQ06203 517 aa13.02□□□□□ -0.33
IFT43-212ENST00000556742 MKRN3Q13064 507 aaKnown RBP13.02□□□□□ -0.33
IFT43-212ENST00000556742 SLC9C2Q5TAH2 1124 aa13.02□□□□□ -0.33
IFT43-212ENST00000556742 BCL11AQ9H165 835 aa13.02□□□□□ -0.33
IFT43-212ENST00000556742 HERC5Q9UII4 1024 aaKnown RBP13.02□□□□□ -0.33
IFT43-212ENST00000556742 FLT1P17948 1338 aa13.02□□□□□ -0.33
IFT43-212ENST00000556742 TTC41PQ6P2S7 1318 aa13.02□□□□□ -0.33
IFT43-212ENST00000556742 TCRBV5S4A2TA0A5A2 114 aa13.01□□□□□ -0.33
IFT43-212ENST00000556742 PHF20L1A8MW92 1017 aa13.01□□□□□ -0.33
IFT43-212ENST00000556742 INPP5BP32019 993 aa13.01□□□□□ -0.33
IFT43-212ENST00000556742 GTF2A2P52657 109 aa13.01□□□□□ -0.33
IFT43-212ENST00000556742 PPIL2Q13356 520 aa13.01□□□□□ -0.33
IFT43-212ENST00000556742 NOM1Q5C9Z4 860 aaKnown RBP13.01□□□□□ -0.33
IFT43-212ENST00000556742 RIOK1Q9BRS2 568 aaKnown RBP13.01□□□□□ -0.33
IFT43-212ENST00000556742 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.01□□□□□ -0.33
IFT43-212ENST00000556742 PI4KBQ9UBF8 816 aa13.01□□□□□ -0.33
IFT43-212ENST00000556742 LOC285556D6RIA3 1793 aa13□□□□□ -0.33
IFT43-212ENST00000556742 ZNF532Q9HCE3 1301 aa13□□□□□ -0.33
IFT43-212ENST00000556742 ADD2P35612 726 aa13□□□□□ -0.33
IFT43-212ENST00000556742 DYNLL1P63167 89 aaKnown RBP13□□□□□ -0.33
IFT43-212ENST00000556742 OTUD7BQ6GQQ9 843 aa13□□□□□ -0.33
IFT43-212ENST00000556742 ZSCAN25Q6NSZ9 544 aa13□□□□□ -0.33
IFT43-212ENST00000556742 METTL16Q86W50 562 aaKnown RBP13□□□□□ -0.33
IFT43-212ENST00000556742 IFNL1Q8IU54 200 aa13□□□□□ -0.33
IFT43-212ENST00000556742 MIGA1Q8NAN2 632 aa13□□□□□ -0.33
IFT43-212ENST00000556742 EXOC6Q8TAG9 804 aa13□□□□□ -0.33
IFT43-212ENST00000556742 TGFBRAP1Q8WUH2 860 aa13□□□□□ -0.33
IFT43-212ENST00000556742 EDC3Q96F86 508 aaKnown RBP13□□□□□ -0.33
IFT43-212ENST00000556742 OTUD5Q96G74 571 aa13□□□□□ -0.33
IFT43-212ENST00000556742 MS4A4AQ96JQ5 239 aa13□□□□□ -0.33
IFT43-212ENST00000556742 RWDD1Q9H446 243 aaPredicted RBP13□□□□□ -0.33
IFT43-212ENST00000556742 ZBTB47Q9UFB7 747 aaPredicted RBP13□□□□□ -0.33
IFT43-212ENST00000556742 TSKSQ9UJT2 592 aa13□□□□□ -0.33
IFT43-212ENST00000556742 SALL3Q9BXA9 1300 aa12.99□□□□□ -0.33
IFT43-212ENST00000556742 MAGEB6P1A0A0J9YX57 407 aa12.99□□□□□ -0.33
IFT43-212ENST00000556742 ERC2O15083 957 aa12.99□□□□□ -0.33
IFT43-212ENST00000556742 CTNND1O60716 968 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms