RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 RNF186Q9NXI6 227 aa12.66□□□□□ -0.38
SNX6-208ENST00000556712 ATAD5Q96QE3 1844 aa12.66□□□□□ -0.38
SNX6-208ENST00000556712 NAV1Q8NEY1 1877 aa12.65□□□□□ -0.38
SNX6-208ENST00000556712 DDX60LQ5H9U9 1706 aaKnown RBP12.65□□□□□ -0.38
SNX6-208ENST00000556712 MYH1P12882 1939 aa12.65□□□□□ -0.38
SNX6-208ENST00000556712 DDTLA6NHG4 134 aaPredicted RBP12.65□□□□□ -0.38
SNX6-208ENST00000556712 ENTPD3O75355 529 aa12.65□□□□□ -0.38
SNX6-208ENST00000556712 INPP5BP32019 993 aa12.65□□□□□ -0.38
SNX6-208ENST00000556712 ZSCAN29Q8IWY8 852 aaPredicted RBP12.65□□□□□ -0.38
SNX6-208ENST00000556712 TEX11Q8IYF3 940 aa12.65□□□□□ -0.38
SNX6-208ENST00000556712 MAGEB6Q8N7X4 407 aa12.65□□□□□ -0.38
SNX6-208ENST00000556712 ZKSCAN4Q969J2 545 aaPredicted RBP12.65□□□□□ -0.38
SNX6-208ENST00000556712 OPTNQ96CV9 577 aa12.65□□□□□ -0.38
SNX6-208ENST00000556712 NOL10Q9BSC4 688 aaKnown RBP12.65□□□□□ -0.38
SNX6-208ENST00000556712 DCTPP1Q9H773 170 aa12.65□□□□□ -0.38
SNX6-208ENST00000556712 PRDM10Q9NQV6 1147 aa12.65□□□□□ -0.38
SNX6-208ENST00000556712 SNCAIPQ9Y6H5 919 aa12.65□□□□□ -0.38
SNX6-208ENST00000556712 FAM196BA6NMK8 535 aa12.64□□□□□ -0.39
SNX6-208ENST00000556712 GOLIM4O00461 696 aa12.64□□□□□ -0.39
SNX6-208ENST00000556712 CA12O43570 354 aa12.64□□□□□ -0.39
SNX6-208ENST00000556712 ZBTB48P10074 688 aaPredicted RBP12.64□□□□□ -0.39
SNX6-208ENST00000556712 CYP7A1P22680 504 aa12.64□□□□□ -0.39
SNX6-208ENST00000556712 DYNLL1P63167 89 aaKnown RBP12.64□□□□□ -0.39
SNX6-208ENST00000556712 MAP3K9P80192 1104 aa12.64□□□□□ -0.39
SNX6-208ENST00000556712 TSHZ3Q63HK5 1081 aa12.64□□□□□ -0.39
SNX6-208ENST00000556712 DCAF15Q66K64 600 aa12.64□□□□□ -0.39
SNX6-208ENST00000556712 MIGA1Q8NAN2 632 aa12.64□□□□□ -0.39
SNX6-208ENST00000556712 OTUD5Q96G74 571 aa12.64□□□□□ -0.39
SNX6-208ENST00000556712 ZNF341Q9BYN7 854 aa12.64□□□□□ -0.39
SNX6-208ENST00000556712 BOLA2Q9H3K6 86 aa12.64□□□□□ -0.39
SNX6-208ENST00000556712 CSADQ9Y600 493 aa12.64□□□□□ -0.39
SNX6-208ENST00000556712 PHIPQ8WWQ0 1821 aa12.63□□□□□ -0.39
SNX6-208ENST00000556712 UNCXA6NJT0 531 aa12.63□□□□□ -0.39
SNX6-208ENST00000556712 SREBF2Q12772 1141 aa12.63□□□□□ -0.39
SNX6-208ENST00000556712 TNS4Q8IZW8 715 aa12.63□□□□□ -0.39
SNX6-208ENST00000556712 HOOK2Q96ED9 719 aa12.63□□□□□ -0.39
SNX6-208ENST00000556712 OSBPL5Q9H0X9 879 aaPredicted RBP12.63□□□□□ -0.39
SNX6-208ENST00000556712 SAGE1Q9NXZ1 904 aa12.63□□□□□ -0.39
SNX6-208ENST00000556712 COL2A1P02458 1487 aaPredicted RBP12.63□□□□□ -0.39
SNX6-208ENST00000556712 FLT1P17948 1338 aa12.62□□□□□ -0.39
SNX6-208ENST00000556712 MANSC4A6NHS7 340 aaPredicted RBP12.62□□□□□ -0.39
SNX6-208ENST00000556712 SPDYE5A6NIY4 337 aa12.62□□□□□ -0.39
SNX6-208ENST00000556712 IGF2BP3O00425 579 aaKnown RBP eCLIP12.62□□□□□ -0.39
SNX6-208ENST00000556712 TBC1D8O95759 1140 aa12.62□□□□□ -0.39
SNX6-208ENST00000556712 TM4SF4P48230 202 aa12.62□□□□□ -0.39
SNX6-208ENST00000556712 MAP3K12Q12852 859 aa12.62□□□□□ -0.39
SNX6-208ENST00000556712 SLC4A8Q2Y0W8 1093 aa12.62□□□□□ -0.39
SNX6-208ENST00000556712 MAPKAPK5Q8IW41 473 aa12.62□□□□□ -0.39
SNX6-208ENST00000556712 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.62□□□□□ -0.39
SNX6-208ENST00000556712 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.62□□□□□ -0.39
SNX6-208ENST00000556712 SUPT16HQ9Y5B9 1047 aaKnown RBP12.62□□□□□ -0.39
SNX6-208ENST00000556712 PTPRFP10586 1907 aa12.62□□□□□ -0.39
SNX6-208ENST00000556712 BAG3O95817 575 aa12.61□□□□□ -0.39
SNX6-208ENST00000556712 CHGBP05060 677 aa12.61□□□□□ -0.39
SNX6-208ENST00000556712 PDE6AP16499 860 aa12.61□□□□□ -0.39
SNX6-208ENST00000556712 ATP5JP18859 108 aa12.61□□□□□ -0.39
SNX6-208ENST00000556712 PPP4CP60510 307 aa12.61□□□□□ -0.39
SNX6-208ENST00000556712 IRX6P78412 446 aaPredicted RBP12.61□□□□□ -0.39
SNX6-208ENST00000556712 SLFNL1Q499Z3 407 aa12.61□□□□□ -0.39
SNX6-208ENST00000556712 IFNL1Q8IU54 200 aa12.61□□□□□ -0.39
SNX6-208ENST00000556712 REM2Q8IYK8 340 aaPredicted RBP12.61□□□□□ -0.39
SNX6-208ENST00000556712 EXOC6Q8TAG9 804 aa12.61□□□□□ -0.39
SNX6-208ENST00000556712 OTUD7AQ8TE49 926 aaPredicted RBP12.61□□□□□ -0.39
SNX6-208ENST00000556712 TGFBRAP1Q8WUH2 860 aa12.61□□□□□ -0.39
SNX6-208ENST00000556712 R3HDMLQ9H3Y0 253 aa12.61□□□□□ -0.39
SNX6-208ENST00000556712 PAG1Q9NWQ8 432 aa12.61□□□□□ -0.39
SNX6-208ENST00000556712 ZNF112Q9UJU3 913 aa12.61□□□□□ -0.39
SNX6-208ENST00000556712 MAP4K4O95819 1239 aaPredicted RBP12.6□□□□□ -0.39
SNX6-208ENST00000556712 PLCG2P16885 1265 aa12.6□□□□□ -0.39
SNX6-208ENST00000556712 TTF1Q15361 905 aaPredicted RBP12.6□□□□□ -0.39
SNX6-208ENST00000556712 SLC9C2Q5TAH2 1124 aa12.6□□□□□ -0.39
SNX6-208ENST00000556712 ERO1BQ86YB8 467 aa12.6□□□□□ -0.39
SNX6-208ENST00000556712 HAUS7Q99871 368 aa12.6□□□□□ -0.39
SNX6-208ENST00000556712 SAP30BPQ9UHR5 308 aaKnown RBP12.6□□□□□ -0.39
SNX6-208ENST00000556712 ZNF532Q9HCE3 1301 aa12.6□□□□□ -0.39
SNX6-208ENST00000556712 CCL15-CCL14A0A0B4J2E2 113 aa12.59□□□□□ -0.39
SNX6-208ENST00000556712 PHF20L1A8MW92 1017 aa12.59□□□□□ -0.39
SNX6-208ENST00000556712 IRF6O14896 467 aa12.59□□□□□ -0.39
SNX6-208ENST00000556712 NPM3O75607 178 aaKnown RBP12.59□□□□□ -0.39
SNX6-208ENST00000556712 CCL15Q16663 113 aa12.59□□□□□ -0.39
SNX6-208ENST00000556712 NOL9Q5SY16 702 aaKnown RBP12.59□□□□□ -0.39
SNX6-208ENST00000556712 CCDC84Q86UT8 332 aaPredicted RBP12.59□□□□□ -0.39
SNX6-208ENST00000556712 BRI3BPQ8WY22 251 aa12.59□□□□□ -0.39
SNX6-208ENST00000556712 MS4A4AQ96JQ5 239 aa12.59□□□□□ -0.39
SNX6-208ENST00000556712 PTPN18Q99952 460 aa12.59□□□□□ -0.39
SNX6-208ENST00000556712 ECHDC1Q9NTX5 307 aa12.59□□□□□ -0.39
SNX6-208ENST00000556712 BAZ2AQ9UIF9 1905 aaKnown RBP12.58□□□□□ -0.39
SNX6-208ENST00000556712 ZSWIM8A7E2V4 1837 aa12.58□□□□□ -0.4
SNX6-208ENST00000556712 TCRBV5S4A2TA0A5A2 114 aa12.58□□□□□ -0.4
SNX6-208ENST00000556712 PPIL2Q13356 520 aa12.58□□□□□ -0.4
SNX6-208ENST00000556712 GPATCH3Q96I76 525 aa12.58□□□□□ -0.4
SNX6-208ENST00000556712 RIOK1Q9BRS2 568 aaKnown RBP12.58□□□□□ -0.4
SNX6-208ENST00000556712 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.58□□□□□ -0.4
SNX6-208ENST00000556712 PALD1Q9ULE6 856 aa12.58□□□□□ -0.4
SNX6-208ENST00000556712 MAGEB6P1A0A0J9YX57 407 aa12.57□□□□□ -0.4
SNX6-208ENST00000556712 TESPA1A2RU30 521 aaPredicted RBP12.57□□□□□ -0.4
SNX6-208ENST00000556712 IGSF3O75054 1194 aa12.57□□□□□ -0.4
SNX6-208ENST00000556712 CAPN15O75808 1086 aa12.57□□□□□ -0.4
SNX6-208ENST00000556712 ADD2P35612 726 aa12.57□□□□□ -0.4
SNX6-208ENST00000556712 USP5P45974 858 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms