RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 ECHDC1Q9NTX5 307 aa13.05□□□□□ -0.32
GABRB3-211ENST00000556636 TCRBV5S4A2TA0A5A2 114 aa13.04□□□□□ -0.32
GABRB3-211ENST00000556636 PHF20L1A8MW92 1017 aa13.04□□□□□ -0.32
GABRB3-211ENST00000556636 BAG3O95817 575 aa13.04□□□□□ -0.32
GABRB3-211ENST00000556636 CTCFP49711 727 aaPredicted RBP13.04□□□□□ -0.32
GABRB3-211ENST00000556636 LBX1P52954 281 aa13.04□□□□□ -0.32
GABRB3-211ENST00000556636 PICALMQ13492 652 aa13.04□□□□□ -0.32
GABRB3-211ENST00000556636 VGLL4Q14135 290 aa13.04□□□□□ -0.32
GABRB3-211ENST00000556636 COL13A1Q5TAT6 717 aaPredicted RBP13.04□□□□□ -0.32
GABRB3-211ENST00000556636 TEX11Q8IYF3 940 aa13.04□□□□□ -0.32
GABRB3-211ENST00000556636 CNKSR2Q8WXI2 1034 aa13.04□□□□□ -0.32
GABRB3-211ENST00000556636 ZKSCAN4Q969J2 545 aaPredicted RBP13.04□□□□□ -0.32
GABRB3-211ENST00000556636 AIDAQ96BJ3 306 aa13.04□□□□□ -0.32
GABRB3-211ENST00000556636 HOOK2Q96ED9 719 aa13.04□□□□□ -0.32
GABRB3-211ENST00000556636 PAG1Q9NWQ8 432 aa13.04□□□□□ -0.32
GABRB3-211ENST00000556636 RNF186Q9NXI6 227 aa13.04□□□□□ -0.32
GABRB3-211ENST00000556636 CHGBP05060 677 aa13.03□□□□□ -0.32
GABRB3-211ENST00000556636 PDE6AP16499 860 aa13.03□□□□□ -0.32
GABRB3-211ENST00000556636 INPP5BP32019 993 aa13.03□□□□□ -0.32
GABRB3-211ENST00000556636 SLFNL1Q499Z3 407 aa13.03□□□□□ -0.32
GABRB3-211ENST00000556636 SLC9C2Q5TAH2 1124 aa13.03□□□□□ -0.32
GABRB3-211ENST00000556636 TSHZ3Q63HK5 1081 aa13.03□□□□□ -0.32
GABRB3-211ENST00000556636 DCAF15Q66K64 600 aa13.03□□□□□ -0.32
GABRB3-211ENST00000556636 TMED8Q6PL24 325 aaPredicted RBP13.03□□□□□ -0.32
GABRB3-211ENST00000556636 SMC5Q8IY18 1101 aa13.03□□□□□ -0.32
GABRB3-211ENST00000556636 REM2Q8IYK8 340 aaPredicted RBP13.03□□□□□ -0.32
GABRB3-211ENST00000556636 MIGA1Q8NAN2 632 aa13.03□□□□□ -0.32
GABRB3-211ENST00000556636 TGFBRAP1Q8WUH2 860 aa13.03□□□□□ -0.32
GABRB3-211ENST00000556636 GCC1Q96CN9 775 aa13.03□□□□□ -0.32
GABRB3-211ENST00000556636 MS4A4AQ96JQ5 239 aa13.03□□□□□ -0.32
GABRB3-211ENST00000556636 WRNIP1Q96S55 665 aa13.03□□□□□ -0.32
GABRB3-211ENST00000556636 RIOK1Q9BRS2 568 aaKnown RBP13.03□□□□□ -0.32
GABRB3-211ENST00000556636 ZNF341Q9BYN7 854 aa13.03□□□□□ -0.32
GABRB3-211ENST00000556636 OSBPL5Q9H0X9 879 aaPredicted RBP13.03□□□□□ -0.32
GABRB3-211ENST00000556636 ELP3Q9H9T3 547 aa13.03□□□□□ -0.32
GABRB3-211ENST00000556636 PRDM10Q9NQV6 1147 aa13.03□□□□□ -0.32
GABRB3-211ENST00000556636 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.03□□□□□ -0.32
GABRB3-211ENST00000556636 TSKSQ9UJT2 592 aa13.03□□□□□ -0.32
GABRB3-211ENST00000556636 SNCAIPQ9Y6H5 919 aa13.03□□□□□ -0.32
GABRB3-211ENST00000556636 SALL3Q9BXA9 1300 aa13.03□□□□□ -0.32
GABRB3-211ENST00000556636 TESPA1A2RU30 521 aaPredicted RBP13.02□□□□□ -0.33
GABRB3-211ENST00000556636 TBC1D12O60347 775 aa13.02□□□□□ -0.33
GABRB3-211ENST00000556636 ZBTB48P10074 688 aaPredicted RBP13.02□□□□□ -0.33
GABRB3-211ENST00000556636 PLCG2P16885 1265 aa13.02□□□□□ -0.33
GABRB3-211ENST00000556636 ANKRD45Q5TZF3 282 aa13.02□□□□□ -0.33
GABRB3-211ENST00000556636 OPTNQ96CV9 577 aa13.02□□□□□ -0.33
GABRB3-211ENST00000556636 BEGAINQ9BUH8 593 aa13.02□□□□□ -0.33
GABRB3-211ENST00000556636 ZNF532Q9HCE3 1301 aa13.02□□□□□ -0.33
GABRB3-211ENST00000556636 MYO5AQ9Y4I1 1855 aaKnown RBP13.02□□□□□ -0.33
GABRB3-211ENST00000556636 SPDYE5A6NIY4 337 aa13.01□□□□□ -0.33
GABRB3-211ENST00000556636 CA12O43570 354 aa13.01□□□□□ -0.33
GABRB3-211ENST00000556636 TRPA1O75762 1119 aa13.01□□□□□ -0.33
GABRB3-211ENST00000556636 ADD2P35612 726 aa13.01□□□□□ -0.33
GABRB3-211ENST00000556636 IRX6P78412 446 aaPredicted RBP13.01□□□□□ -0.33
GABRB3-211ENST00000556636 MAPKAPK5Q8IW41 473 aa13.01□□□□□ -0.33
GABRB3-211ENST00000556636 ZSCAN29Q8IWY8 852 aaPredicted RBP13.01□□□□□ -0.33
GABRB3-211ENST00000556636 PI4K2BQ8TCG2 481 aa13.01□□□□□ -0.33
GABRB3-211ENST00000556636 PTPN18Q99952 460 aa13.01□□□□□ -0.33
GABRB3-211ENST00000556636 NOL10Q9BSC4 688 aaKnown RBP13.01□□□□□ -0.33
GABRB3-211ENST00000556636 CSADQ9Y600 493 aa13.01□□□□□ -0.33
GABRB3-211ENST00000556636 FLT1P17948 1338 aa13□□□□□ -0.33
GABRB3-211ENST00000556636 MANSC4A6NHS7 340 aaPredicted RBP13□□□□□ -0.33
GABRB3-211ENST00000556636 INHBEP58166 350 aa13□□□□□ -0.33
GABRB3-211ENST00000556636 RRP1BQ14684 758 aaKnown RBP13□□□□□ -0.33
GABRB3-211ENST00000556636 NOL9Q5SY16 702 aaKnown RBP13□□□□□ -0.33
GABRB3-211ENST00000556636 METTL16Q86W50 562 aaKnown RBP13□□□□□ -0.33
GABRB3-211ENST00000556636 ERO1BQ86YB8 467 aa13□□□□□ -0.33
GABRB3-211ENST00000556636 RWDD1Q9H446 243 aaPredicted RBP13□□□□□ -0.33
GABRB3-211ENST00000556636 SAGE1Q9NXZ1 904 aa13□□□□□ -0.33
GABRB3-211ENST00000556636 COL2A1P02458 1487 aaPredicted RBP12.99□□□□□ -0.33
GABRB3-211ENST00000556636 TTC41PQ6P2S7 1318 aa12.99□□□□□ -0.33
GABRB3-211ENST00000556636 FAM196BA6NMK8 535 aa12.99□□□□□ -0.33
GABRB3-211ENST00000556636 IGF2BP3O00425 579 aaKnown RBP eCLIP12.99□□□□□ -0.33
GABRB3-211ENST00000556636 IRF6O14896 467 aa12.99□□□□□ -0.33
GABRB3-211ENST00000556636 UBE3CQ15386 1083 aa12.99□□□□□ -0.33
GABRB3-211ENST00000556636 IFNL1Q8IU54 200 aa12.99□□□□□ -0.33
GABRB3-211ENST00000556636 CERS3Q8IU89 383 aa12.99□□□□□ -0.33
GABRB3-211ENST00000556636 DHX36Q9H2U1 1008 aaKnown RBP12.99□□□□□ -0.33
GABRB3-211ENST00000556636 R3HDMLQ9H3Y0 253 aa12.99□□□□□ -0.33
GABRB3-211ENST00000556636 PI4KBQ9UBF8 816 aa12.99□□□□□ -0.33
GABRB3-211ENST00000556636 STAP2Q9UGK3 403 aa12.99□□□□□ -0.33
GABRB3-211ENST00000556636 PALD1Q9ULE6 856 aa12.99□□□□□ -0.33
GABRB3-211ENST00000556636 MAGEB6P1A0A0J9YX57 407 aa12.98□□□□□ -0.33
GABRB3-211ENST00000556636 PPATQ06203 517 aa12.98□□□□□ -0.33
GABRB3-211ENST00000556636 SREBF2Q12772 1141 aa12.98□□□□□ -0.33
GABRB3-211ENST00000556636 FOXP4Q8IVH2 680 aaPredicted RBP12.98□□□□□ -0.33
GABRB3-211ENST00000556636 LCORLQ8N3X6 602 aa12.98□□□□□ -0.33
GABRB3-211ENST00000556636 KBTBD3Q8NAB2 608 aa12.98□□□□□ -0.33
GABRB3-211ENST00000556636 BRI3BPQ8WY22 251 aa12.98□□□□□ -0.33
GABRB3-211ENST00000556636 OTUD5Q96G74 571 aa12.98□□□□□ -0.33
GABRB3-211ENST00000556636 GPATCH3Q96I76 525 aa12.98□□□□□ -0.33
GABRB3-211ENST00000556636 CFHR5Q9BXR6 569 aa12.98□□□□□ -0.33
GABRB3-211ENST00000556636 DNAJC18Q9H819 358 aa12.98□□□□□ -0.33
GABRB3-211ENST00000556636 CTNND1O60716 968 aaKnown RBP12.97□□□□□ -0.33
GABRB3-211ENST00000556636 GLRX3O76003 335 aaKnown RBP12.97□□□□□ -0.33
GABRB3-211ENST00000556636 TBC1D8O95759 1140 aa12.97□□□□□ -0.33
GABRB3-211ENST00000556636 MX1P20591 662 aa12.97□□□□□ -0.33
GABRB3-211ENST00000556636 GTF2A2P52657 109 aa12.97□□□□□ -0.33
GABRB3-211ENST00000556636 PDE1AP54750 535 aa12.97□□□□□ -0.33
GABRB3-211ENST00000556636 NUCB1Q02818 461 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms