RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 TNNI3KQ59H18 835 aa12.99□□□□□ -0.33
SPTLC2-205ENST00000556607 FAM163AQ96GL9 167 aaPredicted RBP12.99□□□□□ -0.33
SPTLC2-205ENST00000556607 PICK1Q9NRD5 415 aa12.99□□□□□ -0.33
SPTLC2-205ENST00000556607 SNRKQ9NRH2 765 aa12.99□□□□□ -0.33
SPTLC2-205ENST00000556607 PTPN22Q9Y2R2 807 aa12.99□□□□□ -0.33
SPTLC2-205ENST00000556607 FPGT-TNNI3KV9GXZ4 949 aa12.99□□□□□ -0.33
SPTLC2-205ENST00000556607 GPR75-ASB3A0A0A6YYF3 556 aa12.98□□□□□ -0.33
SPTLC2-205ENST00000556607 DDTLA6NHG4 134 aaPredicted RBP12.98□□□□□ -0.33
SPTLC2-205ENST00000556607 ZBTB7BO15156 539 aaPredicted RBP12.98□□□□□ -0.33
SPTLC2-205ENST00000556607 ZBTB22O15209 634 aa12.98□□□□□ -0.33
SPTLC2-205ENST00000556607 SSH3Q8TE77 659 aa12.98□□□□□ -0.33
SPTLC2-205ENST00000556607 NSUN4Q96CB9 384 aaKnown RBP12.98□□□□□ -0.33
SPTLC2-205ENST00000556607 DBNDD2Q9BQY9 259 aa12.98□□□□□ -0.33
SPTLC2-205ENST00000556607 BCL11AQ9H165 835 aa12.98□□□□□ -0.33
SPTLC2-205ENST00000556607 DDX4Q9NQI0 724 aaKnown RBP12.98□□□□□ -0.33
SPTLC2-205ENST00000556607 ZNF112Q9UJU3 913 aa12.98□□□□□ -0.33
SPTLC2-205ENST00000556607 MYO5AQ9Y4I1 1855 aaKnown RBP12.97□□□□□ -0.33
SPTLC2-205ENST00000556607 PDHXO00330 501 aa12.97□□□□□ -0.33
SPTLC2-205ENST00000556607 TLR2O60603 784 aa12.97□□□□□ -0.33
SPTLC2-205ENST00000556607 NOL9Q5SY16 702 aaKnown RBP12.97□□□□□ -0.33
SPTLC2-205ENST00000556607 NAA16Q6N069 864 aaPredicted RBP12.97□□□□□ -0.33
SPTLC2-205ENST00000556607 SCYL3Q8IZE3 742 aa12.97□□□□□ -0.33
SPTLC2-205ENST00000556607 PANK1Q8TE04 598 aa12.97□□□□□ -0.33
SPTLC2-205ENST00000556607 CCDC8Q9H0W5 538 aaPredicted RBP12.97□□□□□ -0.33
SPTLC2-205ENST00000556607 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.97□□□□□ -0.33
SPTLC2-205ENST00000556607 GPR108Q9NPR9 543 aa12.97□□□□□ -0.33
SPTLC2-205ENST00000556607 DOCK1Q14185 1865 aa12.97□□□□□ -0.33
SPTLC2-205ENST00000556607 SLURP2P0DP57 97 aa12.96□□□□□ -0.33
SPTLC2-205ENST00000556607 MS4A1P11836 297 aa12.96□□□□□ -0.33
SPTLC2-205ENST00000556607 GADL1Q6ZQY3 521 aa12.96□□□□□ -0.33
SPTLC2-205ENST00000556607 SH3BP5LQ7L8J4 393 aa12.96□□□□□ -0.33
SPTLC2-205ENST00000556607 ANKRD23Q86SG2 305 aa12.96□□□□□ -0.33
SPTLC2-205ENST00000556607 TEX11Q8IYF3 940 aa12.96□□□□□ -0.33
SPTLC2-205ENST00000556607 ZCCHC17Q9NP64 241 aaKnown RBP12.96□□□□□ -0.33
SPTLC2-205ENST00000556607 AATFQ9NY61 560 aaKnown RBP eCLIP12.96□□□□□ -0.33
SPTLC2-205ENST00000556607 CPA4Q9UI42 421 aa12.96□□□□□ -0.33
SPTLC2-205ENST00000556607 ZHX2Q9Y6X8 837 aa12.96□□□□□ -0.33
SPTLC2-205ENST00000556607 ZSWIM8A7E2V4 1837 aa12.96□□□□□ -0.33
SPTLC2-205ENST00000556607 ATAD5Q96QE3 1844 aa12.95□□□□□ -0.34
SPTLC2-205ENST00000556607 MAST2Q6P0Q8 1798 aa12.95□□□□□ -0.34
SPTLC2-205ENST00000556607 FAM196BA6NMK8 535 aa12.95□□□□□ -0.34
SPTLC2-205ENST00000556607 PHF20L1A8MW92 1017 aa12.95□□□□□ -0.34
SPTLC2-205ENST00000556607 BAG3O95817 575 aa12.95□□□□□ -0.34
SPTLC2-205ENST00000556607 PTPRAP18433 802 aa12.95□□□□□ -0.34
SPTLC2-205ENST00000556607 RHBDL3P58872 404 aa12.95□□□□□ -0.34
SPTLC2-205ENST00000556607 SLC9C1Q4G0N8 1177 aa12.95□□□□□ -0.34
SPTLC2-205ENST00000556607 NBPF11Q86T75 865 aa12.95□□□□□ -0.34
SPTLC2-205ENST00000556607 ZNF384Q8TF68 577 aa12.95□□□□□ -0.34
SPTLC2-205ENST00000556607 KCNH4Q9UQ05 1017 aa12.95□□□□□ -0.34
SPTLC2-205ENST00000556607 EXOC6BQ9Y2D4 811 aa12.95□□□□□ -0.34
SPTLC2-205ENST00000556607 APBB1O00213 710 aa12.94□□□□□ -0.34
SPTLC2-205ENST00000556607 CXCL11O14625 94 aa12.94□□□□□ -0.34
SPTLC2-205ENST00000556607 CTNND1O60716 968 aaKnown RBP12.94□□□□□ -0.34
SPTLC2-205ENST00000556607 MAP4K4O95819 1239 aaPredicted RBP12.94□□□□□ -0.34
SPTLC2-205ENST00000556607 MYCP01106 439 aaPredicted RBP12.94□□□□□ -0.34
SPTLC2-205ENST00000556607 ZAP70P43403 619 aa12.94□□□□□ -0.34
SPTLC2-205ENST00000556607 LACTBP83111 547 aaPredicted RBP12.94□□□□□ -0.34
SPTLC2-205ENST00000556607 CAP1Q01518 475 aa12.94□□□□□ -0.34
SPTLC2-205ENST00000556607 CEP85Q6P2H3 762 aa12.94□□□□□ -0.34
SPTLC2-205ENST00000556607 FASTKD5Q7L8L6 764 aaKnown RBP12.94□□□□□ -0.34
SPTLC2-205ENST00000556607 SH3RF3Q8TEJ3 882 aaPredicted RBP12.94□□□□□ -0.34
SPTLC2-205ENST00000556607 TMEM106CQ9BVX2 250 aa12.94□□□□□ -0.34
SPTLC2-205ENST00000556607 TRIM34Q9BYJ4 488 aa12.94□□□□□ -0.34
SPTLC2-205ENST00000556607 ARHGAP39Q9C0H5 1083 aa12.94□□□□□ -0.34
SPTLC2-205ENST00000556607 OSBPL5Q9H0X9 879 aaPredicted RBP12.94□□□□□ -0.34
SPTLC2-205ENST00000556607 NOP58Q9Y2X3 529 aaKnown RBP12.94□□□□□ -0.34
SPTLC2-205ENST00000556607 PTCH2Q9Y6C5 1203 aa12.94□□□□□ -0.34
SPTLC2-205ENST00000556607 RFX7Q2KHR2 1363 aa12.94□□□□□ -0.34
SPTLC2-205ENST00000556607 TRIM75PA6NK02 468 aa12.93□□□□□ -0.34
SPTLC2-205ENST00000556607 FMNL1O95466 1100 aaPredicted RBP12.93□□□□□ -0.34
SPTLC2-205ENST00000556607 CYP2E1P05181 493 aaPredicted RBP12.93□□□□□ -0.34
SPTLC2-205ENST00000556607 PLCG2P16885 1265 aa12.93□□□□□ -0.34
SPTLC2-205ENST00000556607 SLC4A8Q2Y0W8 1093 aa12.93□□□□□ -0.34
SPTLC2-205ENST00000556607 ERC1Q8IUD2 1116 aa12.93□□□□□ -0.34
SPTLC2-205ENST00000556607 PARK7Q99497 189 aaKnown RBP12.93□□□□□ -0.34
SPTLC2-205ENST00000556607 TLR7Q9NYK1 1049 aaKnown RBP12.93□□□□□ -0.34
SPTLC2-205ENST00000556607 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.93□□□□□ -0.34
SPTLC2-205ENST00000556607 DBNLQ9UJU6 430 aaKnown RBP12.93□□□□□ -0.34
SPTLC2-205ENST00000556607 CDK5RAP2Q96SN8 1893 aa12.93□□□□□ -0.34
SPTLC2-205ENST00000556607 PHIPQ8WWQ0 1821 aa12.92□□□□□ -0.34
SPTLC2-205ENST00000556607 POTEFA5A3E0 1075 aa12.92□□□□□ -0.34
SPTLC2-205ENST00000556607 IDH1O75874 414 aaKnown RBP12.92□□□□□ -0.34
SPTLC2-205ENST00000556607 CYP2C8P10632 490 aa12.92□□□□□ -0.34
SPTLC2-205ENST00000556607 PSMC4P43686 418 aa12.92□□□□□ -0.34
SPTLC2-205ENST00000556607 C17orf99Q6UX52 265 aa12.92□□□□□ -0.34
SPTLC2-205ENST00000556607 CCDC84Q86UT8 332 aaPredicted RBP12.92□□□□□ -0.34
SPTLC2-205ENST00000556607 AACSQ86V21 672 aa12.92□□□□□ -0.34
SPTLC2-205ENST00000556607 MAPKAPK5Q8IW41 473 aa12.92□□□□□ -0.34
SPTLC2-205ENST00000556607 CRACR2BQ8N4Y2 399 aaPredicted RBP12.92□□□□□ -0.34
SPTLC2-205ENST00000556607 TGFBRAP1Q8WUH2 860 aa12.92□□□□□ -0.34
SPTLC2-205ENST00000556607 EAF2Q96CJ1 260 aaPredicted RBP12.92□□□□□ -0.34
SPTLC2-205ENST00000556607 IL1RAPL2Q9NP60 686 aa12.92□□□□□ -0.34
SPTLC2-205ENST00000556607 COG6Q9Y2V7 657 aa12.92□□□□□ -0.34
SPTLC2-205ENST00000556607 AFG3L2Q9Y4W6 797 aa12.92□□□□□ -0.34
SPTLC2-205ENST00000556607 ATRNL1Q5VV63 1379 aa12.92□□□□□ -0.34
SPTLC2-205ENST00000556607 PTPRFP10586 1907 aa12.92□□□□□ -0.34
SPTLC2-205ENST00000556607 MGAMO43451 1857 aa12.91□□□□□ -0.34
SPTLC2-205ENST00000556607 FOCADQ5VW36 1801 aa12.91□□□□□ -0.34
SPTLC2-205ENST00000556607 A0A0G2JLL6 359 aaPredicted RBP12.91□□□□□ -0.34
SPTLC2-205ENST00000556607 TBC1D12O60347 775 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms