RNA–Protein interactions for RNA: ENST00000556408.5

SIPA1L1-213, Transcript of signal induced proliferation associated 1 like 1, human

TSL 3

Gene SIPA1L1, Length 903 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1L1-213	ENST00000556408	IFIT5	Q13325	482 aa	Known RBP	12	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	CWF19L2	Q2TBE0	894 aa	Known RBP	12	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	PRRT2	Q7Z6L0	340 aa	Predicted RBP	12	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	PLA2G12B	Q9BX93	195 aa		12	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	PICK1	Q9NRD5	415 aa		12	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	SYNGAP1	Q96PV0	1343 aa		12	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	GBF1	Q92538	1859 aa		12	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	NEURL1B	A8MQ27	555 aa		11.99	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	FRAT2	O75474	233 aa	Predicted RBP	11.99	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	COL6A1	P12109	1028 aa		11.99	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	PRKAR2A	P13861	404 aa	Known RBP	11.99	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	HIBADH	P31937	336 aa	Known RBP	11.99	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	TAF7L	Q5H9L4	462 aa		11.99	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	KSR2	Q6VAB6	950 aa		11.99	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	TDRD7	Q8NHU6	1098 aa	Known RBP	11.99	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	ADAMTS19	Q8TE59	1207 aa		11.99	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	TBC1D22A	Q8WUA7	517 aa		11.99	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	C1QTNF1	Q9BXJ1	281 aa		11.99	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	PCGF6	Q9BYE7	350 aa		11.99	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	TTYH1	Q9H313	450 aa	Predicted RBP	11.99	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	ZNF112	Q9UJU3	913 aa		11.99	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	PI4KAP2	A4QPH2	592 aa		11.98	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	TRIM32	Q13049	653 aa		11.98	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	CHAF1A	Q13111	956 aa	Predicted RBP	11.98	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	CCDC30	Q5VVM6	783 aa		11.98	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	VPS37D	Q86XT2	251 aa		11.98	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	PI4KAP1	Q8N8J0	262 aa		11.98	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.98	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	ZDHHC15	Q96MV8	337 aa		11.98	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	UHRF1	Q96T88	793 aa	Predicted RBP	11.98	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	MYH16	Q9H6N6	1097 aa		11.98	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	THEG	Q9P2T0	379 aa		11.98	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.98	□□□□□ -0.49
SIPA1L1-213	ENST00000556408		H7C1W4	665 aa		11.97	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	CSF1R	P07333	972 aa		11.97	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	GYG1	P46976	350 aa		11.97	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	USP38	Q8NB14	1042 aa		11.97	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	FAM151A	Q8WW52	585 aa		11.97	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	TRIB2	Q92519	343 aa		11.97	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	CNNM1	Q9NRU3	951 aa		11.97	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	MBIP	Q9NS73	344 aa		11.97	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	ZHX2	Q9Y6X8	837 aa		11.97	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	ELL2	O00472	640 aa	Predicted RBP	11.96	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	GCLC	P48506	637 aa	Predicted RBP	11.96	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	SHH	Q15465	462 aa		11.96	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	TRMT44	Q8IYL2	757 aa	Known RBP	11.96	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	SCYL3	Q8IZE3	742 aa		11.96	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	AGTPBP1	Q9UPW5	1226 aa		11.96	□□□□□ -0.49
SIPA1L1-213	ENST00000556408	ZKSCAN1	P17029	563 aa	Predicted RBP	11.95	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	TCP10	Q12799	353 aa		11.95	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	UBE4A	Q14139	1066 aa		11.95	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	MAP3K21	Q5TCX8	1036 aa		11.95	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	LDHAL6A	Q6ZMR3	332 aa		11.95	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	SOCS4	Q8WXH5	440 aa		11.95	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	STK31	Q9BXU1	1019 aa		11.95	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	SENP6	Q9GZR1	1112 aa	Predicted RBP	11.95	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	CDK5RAP2	Q96SN8	1893 aa		11.94	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	TRIM75P	A6NK02	468 aa		11.94	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	CYP2B6	P20813	491 aa		11.94	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	MRPS5	P82675	430 aa	Known RBP	11.94	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	TRIM26	Q12899	539 aa	Predicted RBP	11.94	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	GCKR	Q14397	625 aa		11.94	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	PDE3A	Q14432	1141 aa		11.94	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	CCDC57	Q2TAC2	916 aa		11.94	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	C9orf50	Q5SZB4	431 aa		11.94	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	CCDC146	Q8IYE0	955 aa		11.94	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	ASB2	Q96Q27	587 aa		11.94	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	GAS2L1	Q99501	681 aa	Predicted RBP	11.94	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.94	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.94	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	TRIM35	Q9UPQ4	493 aa		11.94	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	LRRFIP2	Q9Y608	721 aa	Known RBP	11.94	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	ATXN8OS	P0DMR3	200 aa		11.93	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	PTPRA	P18433	802 aa		11.93	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	ATN1	P54259	1190 aa	Predicted RBP	11.93	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	RTP1	P59025	263 aa		11.93	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	GRIK5	Q16478	980 aa		11.93	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.93	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	PPM1E	Q8WY54	764 aa		11.93	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	FAM84B	Q96KN1	310 aa	Predicted RBP	11.93	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	SNX27	Q96L92	541 aa		11.93	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	RNPC3	Q96LT9	517 aa	Known RBP	11.93	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	NUDT12	Q9BQG2	462 aa		11.93	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	GJD2	Q9UKL4	321 aa		11.93	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	ATP11B	Q9Y2G3	1177 aa		11.93	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	SUGT1	Q9Y2Z0	365 aa		11.93	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	AFG3L2	Q9Y4W6	797 aa		11.93	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	GNAI1	P63096	354 aa		11.92	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	CACNB2	Q08289	660 aa	Predicted RBP	11.92	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	POLA2	Q14181	598 aa		11.92	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	CAVIN4	Q5BKX8	364 aa		11.92	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	HHIPL2	Q6UWX4	724 aa		11.92	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.92	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	MRI	Q9BWK5	157 aa		11.92	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	XRCC5	P13010	732 aa	Known RBP	11.91	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	CCND3	P30281	292 aa	Predicted RBP	11.91	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	ZEB1	P37275	1124 aa	Predicted RBP	11.91	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	CASP7	P55210	303 aa		11.91	□□□□□ -0.5
SIPA1L1-213	ENST00000556408	CALD1	Q05682	793 aa	Known RBP	11.91	□□□□□ -0.5

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