RNA–Protein interactions for RNA: ENST00000556360.1

PCNX4-212, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-212ENST00000556360 STK35Q8TDR2 534 aa8.47□□□□□ -1.05
PCNX4-212ENST00000556360 DUSP23Q9BVJ7 150 aa8.47□□□□□ -1.05
PCNX4-212ENST00000556360 BCO2Q9BYV7 579 aa8.47□□□□□ -1.05
PCNX4-212ENST00000556360 NLRP2Q9NX02 1062 aa8.47□□□□□ -1.05
PCNX4-212ENST00000556360 GPN3Q9UHW5 284 aaPredicted RBP8.47□□□□□ -1.05
PCNX4-212ENST00000556360 PCOLCE2Q9UKZ9 415 aa8.47□□□□□ -1.05
PCNX4-212ENST00000556360 C8AP07357 584 aa8.46□□□□□ -1.06
PCNX4-212ENST00000556360 ARNTP27540 789 aa8.46□□□□□ -1.06
PCNX4-212ENST00000556360 OXCT1P55809 520 aa8.46□□□□□ -1.06
PCNX4-212ENST00000556360 PRKCQQ04759 706 aa8.46□□□□□ -1.06
PCNX4-212ENST00000556360 ZNF252P-AS1Q0IIN9 211 aa8.46□□□□□ -1.06
PCNX4-212ENST00000556360 BNIP3Q12983 259 aa8.46□□□□□ -1.06
PCNX4-212ENST00000556360 PPP4R2Q9NY27 417 aa8.46□□□□□ -1.06
PCNX4-212ENST00000556360 GNEQ9Y223 722 aaKnown RBP8.46□□□□□ -1.06
PCNX4-212ENST00000556360 LEFTY1O75610 366 aa8.45□□□□□ -1.06
PCNX4-212ENST00000556360 HCLS1P14317 486 aaPredicted RBP8.45□□□□□ -1.06
PCNX4-212ENST00000556360 NME2P22392 152 aa8.45□□□□□ -1.06
PCNX4-212ENST00000556360 IFI16Q16666 785 aaKnown RBP8.45□□□□□ -1.06
PCNX4-212ENST00000556360 ATG4DQ86TL0 474 aaPredicted RBP8.45□□□□□ -1.06
PCNX4-212ENST00000556360 RNF214Q8ND24 703 aa8.45□□□□□ -1.06
PCNX4-212ENST00000556360 KCNB2Q92953 911 aa8.45□□□□□ -1.06
PCNX4-212ENST00000556360 ISL2Q96A47 359 aa8.45□□□□□ -1.06
PCNX4-212ENST00000556360 DCTN4Q9UJW0 460 aa8.45□□□□□ -1.06
PCNX4-212ENST00000556360 CARMIL2Q6F5E8 1435 aa8.45□□□□□ -1.06
PCNX4-212ENST00000556360 BIN1O00499 593 aa8.44□□□□□ -1.06
PCNX4-212ENST00000556360 CEACAM5P06731 702 aa8.44□□□□□ -1.06
PCNX4-212ENST00000556360 CD8BP10966 210 aa8.44□□□□□ -1.06
PCNX4-212ENST00000556360 ENOX2Q16206 610 aaKnown RBP8.44□□□□□ -1.06
PCNX4-212ENST00000556360 C3orf58Q8NDZ4 430 aa8.44□□□□□ -1.06
PCNX4-212ENST00000556360 TNKS2Q9H2K2 1166 aa8.44□□□□□ -1.06
PCNX4-212ENST00000556360 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.44□□□□□ -1.06
PCNX4-212ENST00000556360 RNGTTO60942 597 aaKnown RBP8.43□□□□□ -1.06
PCNX4-212ENST00000556360 FAM214BQ7L5A3 538 aa8.43□□□□□ -1.06
PCNX4-212ENST00000556360 EMILIN2Q9BXX0 1053 aa8.43□□□□□ -1.06
PCNX4-212ENST00000556360 MBNL3Q9NUK0 354 aaKnown RBP8.43□□□□□ -1.06
PCNX4-212ENST00000556360 PLAGL2Q9UPG8 496 aa8.43□□□□□ -1.06
PCNX4-212ENST00000556360 TREHO43280 583 aa8.42□□□□□ -1.06
PCNX4-212ENST00000556360 NTF4P34130 210 aa8.42□□□□□ -1.06
PCNX4-212ENST00000556360 ANKRD24Q8TF21 1146 aa8.42□□□□□ -1.06
PCNX4-212ENST00000556360 NECAB3Q96P71 396 aaPredicted RBP8.42□□□□□ -1.06
PCNX4-212ENST00000556360 ADAMTS6Q9UKP5 1117 aa8.42□□□□□ -1.06
PCNX4-212ENST00000556360 TIMELESSQ9UNS1 1208 aa8.42□□□□□ -1.06
PCNX4-212ENST00000556360 TMEM265A0A087WTH1 108 aa8.41□□□□□ -1.06
PCNX4-212ENST00000556360 RNASE1P07998 156 aaKnown RBP8.41□□□□□ -1.06
PCNX4-212ENST00000556360 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.41□□□□□ -1.06
PCNX4-212ENST00000556360 LCE1DQ5T752 114 aa8.41□□□□□ -1.06
PCNX4-212ENST00000556360 NXPE4Q6UWF7 544 aa8.41□□□□□ -1.06
PCNX4-212ENST00000556360 GPBAR1Q8TDU6 330 aa8.41□□□□□ -1.06
PCNX4-212ENST00000556360 HRASLS5Q96KN8 279 aa8.41□□□□□ -1.06
PCNX4-212ENST00000556360 PNMA6FA0A0J9YX94 578 aa8.4□□□□□ -1.06
PCNX4-212ENST00000556360 RING1Q06587 406 aa8.4□□□□□ -1.06
PCNX4-212ENST00000556360 MAP1SQ66K74 1059 aaPredicted RBP8.4□□□□□ -1.06
PCNX4-212ENST00000556360 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.4□□□□□ -1.06
PCNX4-212ENST00000556360 TOP6BLQ8N6T0 577 aa8.4□□□□□ -1.06
PCNX4-212ENST00000556360 RC3H2Q9HBD1 1191 aaKnown RBP8.4□□□□□ -1.06
PCNX4-212ENST00000556360 AKAP2Q9Y2D5 859 aa8.4□□□□□ -1.06
PCNX4-212ENST00000556360 SNX11Q9Y5W9 270 aa8.4□□□□□ -1.06
PCNX4-212ENST00000556360 IGF2BP3O00425 579 aaKnown RBP eCLIP8.39□□□□□ -1.07
PCNX4-212ENST00000556360 AOC3Q16853 763 aa8.39□□□□□ -1.07
PCNX4-212ENST00000556360 SCARA3Q6AZY7 606 aa8.39□□□□□ -1.07
PCNX4-212ENST00000556360 HEXIM2Q96MH2 286 aaKnown RBP8.39□□□□□ -1.07
PCNX4-212ENST00000556360 SRCIN1Q9C0H9 1055 aa8.39□□□□□ -1.07
PCNX4-212ENST00000556360 PPM1HQ9ULR3 514 aa8.39□□□□□ -1.07
PCNX4-212ENST00000556360 ENC1O14682 589 aa8.38□□□□□ -1.07
PCNX4-212ENST00000556360 TRIM37O94972 964 aa8.38□□□□□ -1.07
PCNX4-212ENST00000556360 BMP6P22004 513 aa8.38□□□□□ -1.07
PCNX4-212ENST00000556360 CD96P40200 585 aa8.38□□□□□ -1.07
PCNX4-212ENST00000556360 PLCB3Q01970 1234 aa8.38□□□□□ -1.07
PCNX4-212ENST00000556360 LRRN4CLQ8ND94 238 aa8.38□□□□□ -1.07
PCNX4-212ENST00000556360 FBF1Q8TES7 1133 aa8.38□□□□□ -1.07
PCNX4-212ENST00000556360 ARID1BQ8NFD5 2236 aaPredicted RBP8.38□□□□□ -1.07
PCNX4-212ENST00000556360 GSTT1P30711 240 aa8.37□□□□□ -1.07
PCNX4-212ENST00000556360 SLC23A3Q6PIS1 610 aa8.37□□□□□ -1.07
PCNX4-212ENST00000556360 PI4K2BQ8TCG2 481 aa8.37□□□□□ -1.07
PCNX4-212ENST00000556360 CEP44Q9C0F1 390 aa8.37□□□□□ -1.07
PCNX4-212ENST00000556360 SSU72Q9NP77 194 aaKnown RBP8.37□□□□□ -1.07
PCNX4-212ENST00000556360 FANCGO15287 622 aa8.36□□□□□ -1.07
PCNX4-212ENST00000556360 ANGEL2Q5VTE6 544 aaKnown RBP8.36□□□□□ -1.07
PCNX4-212ENST00000556360 MPRIPQ6WCQ1 1025 aa8.36□□□□□ -1.07
PCNX4-212ENST00000556360 FLAD1Q8NFF5 587 aa8.36□□□□□ -1.07
PCNX4-212ENST00000556360 TMEM40Q8WWA1 233 aa8.36□□□□□ -1.07
PCNX4-212ENST00000556360 FAM168AQ92567 244 aa8.36□□□□□ -1.07
PCNX4-212ENST00000556360 PRDM10Q9NQV6 1147 aa8.36□□□□□ -1.07
PCNX4-212ENST00000556360 BIN2Q9UBW5 565 aaPredicted RBP8.36□□□□□ -1.07
PCNX4-212ENST00000556360 BRD1O95696 1058 aa8.35□□□□□ -1.07
PCNX4-212ENST00000556360 FMR1Q06787 632 aaKnown RBP eCLIP8.35□□□□□ -1.07
PCNX4-212ENST00000556360 PPM1JQ5JR12 505 aa8.35□□□□□ -1.07
PCNX4-212ENST00000556360 ARHGAP27Q6ZUM4 889 aa8.35□□□□□ -1.07
PCNX4-212ENST00000556360 SPACA3Q8IXA5 215 aa8.35□□□□□ -1.07
PCNX4-212ENST00000556360 GRIN3AQ8TCU5 1115 aa8.35□□□□□ -1.07
PCNX4-212ENST00000556360 ACSBG1Q96GR2 724 aa8.35□□□□□ -1.07
PCNX4-212ENST00000556360 GTF2IRD1Q9UHL9 959 aa8.35□□□□□ -1.07
PCNX4-212ENST00000556360 SAMM50Q9Y512 469 aa8.35□□□□□ -1.07
PCNX4-212ENST00000556360 GIPC1O14908 333 aa8.34□□□□□ -1.07
PCNX4-212ENST00000556360 PAGE1O75459 146 aa8.34□□□□□ -1.07
PCNX4-212ENST00000556360 MAPK1P28482 360 aa8.34□□□□□ -1.07
PCNX4-212ENST00000556360 ZBTB37Q5TC79 503 aa8.34□□□□□ -1.07
PCNX4-212ENST00000556360 TPTE2Q6XPS3 522 aa8.34□□□□□ -1.07
PCNX4-212ENST00000556360 UBE3DQ7Z6J8 389 aa8.34□□□□□ -1.07
PCNX4-212ENST00000556360 CBX8Q9HC52 389 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms