RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 WNK4Q96J92 1243 aa18.46■□□□□ 0.55
ACTN1-217ENST00000556203 WRNIP1Q96S55 665 aa18.46■□□□□ 0.55
ACTN1-217ENST00000556203 CSRNP1Q96S65 589 aa18.46■□□□□ 0.55
ACTN1-217ENST00000556203 ZNF341Q9BYN7 854 aa18.46■□□□□ 0.55
ACTN1-217ENST00000556203 ELP3Q9H9T3 547 aa18.46■□□□□ 0.55
ACTN1-217ENST00000556203 PAG1Q9NWQ8 432 aa18.46■□□□□ 0.55
ACTN1-217ENST00000556203 PCNTO95613 3336 aa18.46■□□□□ 0.55
ACTN1-217ENST00000556203 MAST2Q6P0Q8 1798 aa18.45■□□□□ 0.54
ACTN1-217ENST00000556203 DDTLA6NHG4 134 aaPredicted RBP18.45■□□□□ 0.54
ACTN1-217ENST00000556203 TSHZ3Q63HK5 1081 aa18.45■□□□□ 0.54
ACTN1-217ENST00000556203 REM2Q8IYK8 340 aaPredicted RBP18.45■□□□□ 0.54
ACTN1-217ENST00000556203 MIGA1Q8NAN2 632 aa18.45■□□□□ 0.54
ACTN1-217ENST00000556203 GCC1Q96CN9 775 aa18.45■□□□□ 0.54
ACTN1-217ENST00000556203 GPATCH3Q96I76 525 aa18.45■□□□□ 0.54
ACTN1-217ENST00000556203 CSADQ9Y600 493 aa18.45■□□□□ 0.54
ACTN1-217ENST00000556203 PDE6AP16499 860 aa18.44■□□□□ 0.54
ACTN1-217ENST00000556203 DYNLL1P63167 89 aaKnown RBP18.44■□□□□ 0.54
ACTN1-217ENST00000556203 IRX6P78412 446 aaPredicted RBP18.44■□□□□ 0.54
ACTN1-217ENST00000556203 SLC9C2Q5TAH2 1124 aa18.44■□□□□ 0.54
ACTN1-217ENST00000556203 ANKRD45Q5TZF3 282 aa18.44■□□□□ 0.54
ACTN1-217ENST00000556203 TMED8Q6PL24 325 aaPredicted RBP18.44■□□□□ 0.54
ACTN1-217ENST00000556203 OSBPL5Q9H0X9 879 aaPredicted RBP18.44■□□□□ 0.54
ACTN1-217ENST00000556203 ZBTB47Q9UFB7 747 aaPredicted RBP18.44■□□□□ 0.54
ACTN1-217ENST00000556203 TSKSQ9UJT2 592 aa18.44■□□□□ 0.54
ACTN1-217ENST00000556203 ATRNL1Q5VV63 1379 aa18.43■□□□□ 0.54
ACTN1-217ENST00000556203 CA12O43570 354 aa18.43■□□□□ 0.54
ACTN1-217ENST00000556203 ZBTB48P10074 688 aaPredicted RBP18.43■□□□□ 0.54
ACTN1-217ENST00000556203 HSPA8P11142 646 aaKnown RBP18.43■□□□□ 0.54
ACTN1-217ENST00000556203 GJA5P36382 358 aa18.43■□□□□ 0.54
ACTN1-217ENST00000556203 TGFBRAP1Q8WUH2 860 aa18.43■□□□□ 0.54
ACTN1-217ENST00000556203 ZKSCAN4Q969J2 545 aaPredicted RBP18.43■□□□□ 0.54
ACTN1-217ENST00000556203 OPTNQ96CV9 577 aa18.43■□□□□ 0.54
ACTN1-217ENST00000556203 RWDD1Q9H446 243 aaPredicted RBP18.43■□□□□ 0.54
ACTN1-217ENST00000556203 INPP5BP32019 993 aa18.42■□□□□ 0.54
ACTN1-217ENST00000556203 LBX1P52954 281 aa18.42■□□□□ 0.54
ACTN1-217ENST00000556203 MAPKAPK5Q8IW41 473 aa18.42■□□□□ 0.54
ACTN1-217ENST00000556203 OTUD7AQ8TE49 926 aaPredicted RBP18.42■□□□□ 0.54
ACTN1-217ENST00000556203 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
ACTN1-217ENST00000556203 SNCAIPQ9Y6H5 919 aa18.42■□□□□ 0.54
ACTN1-217ENST00000556203 ZNF532Q9HCE3 1301 aa18.42■□□□□ 0.54
ACTN1-217ENST00000556203 SLURP2P0DP57 97 aa18.41■□□□□ 0.54
ACTN1-217ENST00000556203 SREBF2Q12772 1141 aa18.41■□□□□ 0.54
ACTN1-217ENST00000556203 CERS3Q8IU89 383 aa18.41■□□□□ 0.54
ACTN1-217ENST00000556203 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.41■□□□□ 0.54
ACTN1-217ENST00000556203 RNF186Q9NXI6 227 aa18.41■□□□□ 0.54
ACTN1-217ENST00000556203 ZNF112Q9UJU3 913 aa18.41■□□□□ 0.54
ACTN1-217ENST00000556203 FLT1P17948 1338 aa18.41■□□□□ 0.54
ACTN1-217ENST00000556203 MAGEB6P1A0A0J9YX57 407 aa18.4■□□□□ 0.54
ACTN1-217ENST00000556203 TCRBV5S4A2TA0A5A2 114 aa18.4■□□□□ 0.54
ACTN1-217ENST00000556203 MANSC4A6NHS7 340 aaPredicted RBP18.4■□□□□ 0.54
ACTN1-217ENST00000556203 IGHDP01880 384 aa18.4■□□□□ 0.54
ACTN1-217ENST00000556203 TM4SF4P48230 202 aa18.4■□□□□ 0.54
ACTN1-217ENST00000556203 OTUD5Q96G74 571 aa18.4■□□□□ 0.54
ACTN1-217ENST00000556203 RIOK1Q9BRS2 568 aaKnown RBP18.4■□□□□ 0.54
ACTN1-217ENST00000556203 SAGE1Q9NXZ1 904 aa18.4■□□□□ 0.54
ACTN1-217ENST00000556203 TTC41PQ6P2S7 1318 aa18.4■□□□□ 0.54
ACTN1-217ENST00000556203 COL2A1P02458 1487 aaPredicted RBP18.39■□□□□ 0.54
ACTN1-217ENST00000556203 SPDYE5A6NIY4 337 aa18.39■□□□□ 0.53
ACTN1-217ENST00000556203 PHF20L1A8MW92 1017 aa18.39■□□□□ 0.53
ACTN1-217ENST00000556203 TRPA1O75762 1119 aa18.39■□□□□ 0.53
ACTN1-217ENST00000556203 MX1P20591 662 aa18.39■□□□□ 0.53
ACTN1-217ENST00000556203 ADD2P35612 726 aa18.39■□□□□ 0.53
ACTN1-217ENST00000556203 USP5P45974 858 aa18.39■□□□□ 0.53
ACTN1-217ENST00000556203 MAP3K10Q02779 954 aa18.39■□□□□ 0.53
ACTN1-217ENST00000556203 SLFNL1Q499Z3 407 aa18.39■□□□□ 0.53
ACTN1-217ENST00000556203 COL13A1Q5TAT6 717 aaPredicted RBP18.39■□□□□ 0.53
ACTN1-217ENST00000556203 PRDM10Q9NQV6 1147 aa18.39■□□□□ 0.53
ACTN1-217ENST00000556203 MYO5AQ9Y4I1 1855 aaKnown RBP18.39■□□□□ 0.53
ACTN1-217ENST00000556203 OTOFQ9HC10 1997 aa18.39■□□□□ 0.53
ACTN1-217ENST00000556203 DOCK2Q92608 1830 aa18.38■□□□□ 0.53
ACTN1-217ENST00000556203 ERC2O15083 957 aa18.38■□□□□ 0.53
ACTN1-217ENST00000556203 TBC1D12O60347 775 aa18.38■□□□□ 0.53
ACTN1-217ENST00000556203 CHGBP05060 677 aa18.38■□□□□ 0.53
ACTN1-217ENST00000556203 NOL9Q5SY16 702 aaKnown RBP18.38■□□□□ 0.53
ACTN1-217ENST00000556203 ERO1BQ86YB8 467 aa18.38■□□□□ 0.53
ACTN1-217ENST00000556203 SMC5Q8IY18 1101 aa18.38■□□□□ 0.53
ACTN1-217ENST00000556203 DHX36Q9H2U1 1008 aaKnown RBP18.38■□□□□ 0.53
ACTN1-217ENST00000556203 SAP30BPQ9UHR5 308 aaKnown RBP18.38■□□□□ 0.53
ACTN1-217ENST00000556203 FAM196BA6NMK8 535 aa18.37■□□□□ 0.53
ACTN1-217ENST00000556203 GLRX3O76003 335 aaKnown RBP18.37■□□□□ 0.53
ACTN1-217ENST00000556203 B4GALNT3Q6L9W6 998 aa18.37■□□□□ 0.53
ACTN1-217ENST00000556203 PI4K2BQ8TCG2 481 aa18.37■□□□□ 0.53
ACTN1-217ENST00000556203 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.37■□□□□ 0.53
ACTN1-217ENST00000556203 PI4KBQ9UBF8 816 aa18.37■□□□□ 0.53
ACTN1-217ENST00000556203 PALD1Q9ULE6 856 aa18.37■□□□□ 0.53
ACTN1-217ENST00000556203 INHBEP58166 350 aa18.36■□□□□ 0.53
ACTN1-217ENST00000556203 UBE3CQ15386 1083 aa18.36■□□□□ 0.53
ACTN1-217ENST00000556203 ZSCAN25Q6NSZ9 544 aa18.36■□□□□ 0.53
ACTN1-217ENST00000556203 IFNL1Q8IU54 200 aa18.36■□□□□ 0.53
ACTN1-217ENST00000556203 SCYL3Q8IZE3 742 aa18.36■□□□□ 0.53
ACTN1-217ENST00000556203 LCORLQ8N3X6 602 aa18.36■□□□□ 0.53
ACTN1-217ENST00000556203 SALL3Q9BXA9 1300 aa18.36■□□□□ 0.53
ACTN1-217ENST00000556203 LNPKQ9C0E8 428 aa18.36■□□□□ 0.53
ACTN1-217ENST00000556203 IRF6O14896 467 aa18.35■□□□□ 0.53
ACTN1-217ENST00000556203 GTF2A2P52657 109 aa18.35■□□□□ 0.53
ACTN1-217ENST00000556203 PPATQ06203 517 aa18.35■□□□□ 0.53
ACTN1-217ENST00000556203 PPIL2Q13356 520 aa18.35■□□□□ 0.53
ACTN1-217ENST00000556203 SLC4A8Q2Y0W8 1093 aa18.35■□□□□ 0.53
ACTN1-217ENST00000556203 KBTBD3Q8NAB2 608 aa18.35■□□□□ 0.53
ACTN1-217ENST00000556203 MS4A4AQ96JQ5 239 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms